Hi Michael Thanks very much for that, it did indeed solve the problem.
I had it setup on my internal servers, as I have a separate script for tomcat startup, but forgot all about it on the Amazon Cloud servers. For info I added CATALINA_OPTS="-Djava.awt.headless=true" export CATALINA_OPTS to $tomcat_home/bin/setenv.sh Thanks again Regards Mark On 07/06/2013 19:29, "Michael Della Bitta" <michael.della.bi...@appinions.com> wrote: > Hi Mark, > > This is a total shot in the dark, but does > passing -Djava.awt.headless=true when you run the server help at all? > > More on awt headless mode: > http://www.oracle.com/technetwork/articles/javase/headless-136834.html > > Michael Della Bitta > > Applications Developer > > o: +1 646 532 3062 | c: +1 917 477 7906 > > appinions inc. > > “The Science of Influence Marketing” > > 18 East 41st Street > > New York, NY 10017 > > t: @appinions <https://twitter.com/Appinions> | g+: > plus.google.com/appinions > w: appinions.com <http://www.appinions.com/> > > > On Fri, Jun 7, 2013 at 11:31 AM, Mark Wilson <m...@sanger.ac.uk> wrote: > >> Hi >> >> I am having an issue with adding pdf documents to a SolrCloud index I have >> setup. >> >> I can index pdf documents fine using 4.3.0 on my local box, but I have a >> SolrCloud instance setup on the Amazon Cloud (Using 2 servers) and I get >> Error. >> >> It seems that it is not loading org.apache.pdfbox.pdmodel.PDPage. However, >> the jar is in the directory, and referenced in the solrconfig.xml file >> >> <lib dir="/www/solr/lib/contrib/extraction/lib" regex=".*\.jar" /> >> <lib dir="/www/solr/lib/" regex="solr-cell-\d.*\.jar" /> >> >> <lib dir="/www/solr/lib/contrib/clustering/lib/" regex=".*\.jar" /> >> <lib dir="/www/solr/lib/" regex="solr-clustering-\d.*\.jar" /> >> >> <lib dir="/www/solr/lib/contrib/langid/lib/" regex=".*\.jar" /> >> <lib dir="/www/solr/lib/" regex="solr-langid-\d.*\.jar" /> >> >> <lib dir="/www/solr/lib/contrib/velocity/lib" regex=".*\.jar" /> >> <lib dir="/www/solr/lib/" regex="solr-velocity-\d.*\.jar" /> >> >> When I start Tomcat, I can see that the file has loaded. >> >> 2705 [coreLoadExecutor-4-thread-3] INFO >> org.apache.solr.core.SolrResourceLoader Adding >> 'file:/www/solr/lib/contrib/extraction/lib/pdfbox-1.7.1.jar' to classloader >> >> But when I try to add a document. >> >> java >> -Durl= >> http://ec2-blah-blaheu-west-1.compute.amazonaws.com:8080/solr/quosa2-c >> ollection/update/extract -Dparams=literal.id=pdf1 -Dtype=text/pdf -jar >> post.jar 2008.Genomics.pdf >> >> >> I get this error. I¹m running on an Ubuntu machine. >> >> Linux ip-10-229-125-163 3.5.0-21-generic #32-Ubuntu SMP Tue Dec 11 18:51:59 >> UTC 2012 x86_64 x86_64 x86_64 GNU/Linux >> >> Error log. >> >> 88168 [http-bio-8080-exec-1] INFO >> org.apache.solr.update.processor.LogUpdateProcessor >> [quosa2-collection_shard1_replica1] webapp=/solr path=/update/extract >> params={literal.id=pdf1} {} 0 1534 >> 88180 [http-bio-8080-exec-1] ERROR >> org.apache.solr.servlet.SolrDispatchFilter >> null:java.lang.RuntimeException: java.lang.UnsatisfiedLinkError: >> /usr/lib/jvm/java-7-oracle/jre/lib/amd64/xawt/libmawt.so: libXrender.so.1: >> cannot open shared object file: No such file or directory >> at >> >> org.apache.solr.servlet.SolrDispatchFilter.sendError(SolrDispatchFilter.java >> :670) >> at >> >> org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: >> 380) >> at >> >> org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: >> 155) >> at >> >> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(Application >> FilterChain.java:243) >> at >> >> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterCh >> ain.java:210) >> at >> >> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.ja >> va:222) >> at >> >> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.ja >> va:123) >> at >> >> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:171 >> ) >> at >> >> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:99) >> at >> org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:947) >> at >> >> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java >> :118) >> at >> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:408) >> at >> >> org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Proce >> ssor.java:1009) >> at >> >> org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(Abstrac >> tProtocol.java:589) >> at >> >> org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java: >> 310) >> at >> >> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:11 >> 45) >> at >> >> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:6 >> 15) >> at java.lang.Thread.run(Thread.java:722) >> Caused by: java.lang.UnsatisfiedLinkError: >> /usr/lib/jvm/java-7-oracle/jre/lib/amd64/xawt/libmawt.so: libXrender.so.1: >> cannot open shared object file: No such file or directory >> at java.lang.ClassLoader$NativeLibrary.load(Native Method) >> at java.lang.ClassLoader.loadLibrary1(ClassLoader.java:1939) >> at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1864) >> at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1825) >> at java.lang.Runtime.load0(Runtime.java:792) >> at java.lang.System.load(System.java:1059) >> at java.lang.ClassLoader$NativeLibrary.load(Native Method) >> at java.lang.ClassLoader.loadLibrary1(ClassLoader.java:1939) >> at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1864) >> at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1846) >> at java.lang.Runtime.loadLibrary0(Runtime.java:845) >> at java.lang.System.loadLibrary(System.java:1084) >> at sun.security.action.LoadLibraryAction.run(LoadLibraryAction.java:67) >> at sun.security.action.LoadLibraryAction.run(LoadLibraryAction.java:47) >> at java.security.AccessController.doPrivileged(Native Method) >> at java.awt.Toolkit.loadLibraries(Toolkit.java:1648) >> at java.awt.Toolkit.<clinit>(Toolkit.java:1670) >> at java.awt.Color.<clinit>(Color.java:275) >> at org.apache.pdfbox.pdmodel.PDPage.<clinit>(PDPage.java:72) >> at org.apache.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:212) >> at org.apache.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:184) >> at >> >> org.apache.pdfbox.pdmodel.PDDocumentCatalog.getAllPages(PDDocumentCatalog.ja >> va:211) >> at >> org.apache.pdfbox.util.PDFTextStripper.writeText(PDFTextStripper.java:328) >> at org.apache.tika.parser.pdf.PDF2XHTML.process(PDF2XHTML.java:72) >> at org.apache.tika.parser.pdf.PDFParser.parse(PDFParser.java:153) >> at >> org.apache.tika.parser.CompositeParser.parse(CompositeParser.java:242) >> at >> org.apache.tika.parser.CompositeParser.parse(CompositeParser.java:242) >> at >> org.apache.tika.parser.AutoDetectParser.parse(AutoDetectParser.java:120) >> at >> >> org.apache.solr.handler.extraction.ExtractingDocumentLoader.load(ExtractingD >> ocumentLoader.java:219) >> at >> >> org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentSt >> reamHandlerBase.java:74) >> at >> >> org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase. >> java:135) >> at >> >> org.apache.solr.core.RequestHandlers$LazyRequestHandlerWrapper.handleRequest >> (RequestHandlers.java:242) >> at org.apache.solr.core.SolrCore.execute(SolrCore.java:1816) >> at >> >> org.apache.solr.servlet.SolrDispatchFilter.execute(SolrDispatchFilter.java:6 >> 56) >> at >> >> org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: >> 359) >> ... 16 more >> >> 88234 [http-bio-8080-exec-2] INFO org.apache.solr.update.UpdateHandler >> start >> >> commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa >> lse,softCommit=false,prepareCommit=false} >> 88268 [http-bio-8080-exec-2] INFO org.apache.solr.core.SolrCore >> SolrDeletionPolicy.onCommit: commits:num=2 >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard1_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@7b2d9e10; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_15,generation=41,filenames=[segments_15] >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard1_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@7b2d9e10; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_16,generation=42,filenames=[segments_16] >> 88268 [http-bio-8080-exec-2] INFO org.apache.solr.core.SolrCore newest >> commit = 42[segments_16] >> 88269 [http-bio-8080-exec-2] INFO org.apache.solr.search.SolrIndexSearcher >> Opening Searcher@6175f8cb main >> 88270 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener sending requests to Searcher@6175f8cb >> main{StandardDirectoryReader(segments_15:9:nrt)} >> 88271 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener done. >> 88273 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore >> [quosa2-collection_shard1_replica1] Registered new searcher >> Searcher@6175f8cb main{StandardDirectoryReader(segments_15:9:nrt)} >> 88273 [http-bio-8080-exec-2] INFO org.apache.solr.update.UpdateHandler >> end_commit_flush >> 88288 [http-bio-8080-exec-2] INFO >> org.apache.solr.update.SolrCmdDistributor >> Distrib commit to:[StdNode: >> http://10.234.215.24:8080/solr/quosa2-collection_shard1_replica3/, >> StdNode: >> http://10.229.125.163:8080/solr/quosa2-collection_shard2_replica1/, >> StdNode: >> http://10.234.215.24:8080/solr/quosa2-collection_shard2_replica3/, >> StdNode: >> http://10.229.125.163:8080/solr/quosa2-collection_shard3_replica1/, >> StdNode: >> http://10.234.215.24:8080/solr/quosa2-collection_shard3_replica3/] >> >> params:commit_end_point=true&commit=true&softCommit=false&waitSearcher=true& >> expungeDeletes=false >> 88321 [http-bio-8080-exec-3] INFO org.apache.solr.update.UpdateHandler >> start >> >> commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa >> lse,softCommit=false,prepareCommit=false} >> 88334 [http-bio-8080-exec-4] INFO org.apache.solr.update.UpdateHandler >> start >> >> commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa >> lse,softCommit=false,prepareCommit=false} >> 88351 [http-bio-8080-exec-3] INFO org.apache.solr.core.SolrCore >> SolrDeletionPolicy.onCommit: commits:num=2 >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard2_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@7d5549ce; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_19,generation=45,filenames=[segments_19] >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard2_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@7d5549ce; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_1a,generation=46,filenames=[segments_1a] >> 88354 [http-bio-8080-exec-3] INFO org.apache.solr.core.SolrCore newest >> commit = 46[segments_1a] >> 88357 [http-bio-8080-exec-3] INFO org.apache.solr.search.SolrIndexSearcher >> Opening Searcher@775f6084 main >> 88360 [http-bio-8080-exec-4] INFO org.apache.solr.core.SolrCore >> SolrDeletionPolicy.onCommit: commits:num=2 >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard3_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@782256a2; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_19,generation=45,filenames=[segments_19] >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard3_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@782256a2; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_1a,generation=46,filenames=[segments_1a] >> 88362 [http-bio-8080-exec-4] INFO org.apache.solr.core.SolrCore newest >> commit = 46[segments_1a] >> 88363 [http-bio-8080-exec-4] INFO org.apache.solr.search.SolrIndexSearcher >> Opening Searcher@4a2415c5 main >> 88364 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener sending requests to Searcher@4a2415c5 >> main{StandardDirectoryReader(segments_19:1:nrt)} >> 88365 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener done. >> 88367 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore >> [quosa2-collection_shard3_replica1] Registered new searcher >> Searcher@4a2415c5 main{StandardDirectoryReader(segments_19:1:nrt)} >> 88367 [http-bio-8080-exec-4] INFO org.apache.solr.update.UpdateHandler >> end_commit_flush >> 88368 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener sending requests to Searcher@775f6084 >> main{StandardDirectoryReader(segments_19:1:nrt)} >> 88368 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener done. >> 88367 [http-bio-8080-exec-4] INFO >> org.apache.solr.update.processor.LogUpdateProcessor >> [quosa2-collection_shard3_replica1] webapp=/solr path=/update >> >> params={waitSearcher=true&commit=true&wt=javabin&expungeDeletes=false&commit >> _end_point=true&version=2&softCommit=false} {commit=} 0 33 >> 88371 [http-bio-8080-exec-3] INFO org.apache.solr.update.UpdateHandler >> end_commit_flush >> 88370 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore >> [quosa2-collection_shard2_replica1] Registered new searcher >> Searcher@775f6084 main{StandardDirectoryReader(segments_19:1:nrt)} >> 88376 [http-bio-8080-exec-3] INFO >> org.apache.solr.update.processor.LogUpdateProcessor >> [quosa2-collection_shard2_replica1] webapp=/solr path=/update >> >> params={waitSearcher=true&commit=true&wt=javabin&expungeDeletes=false&commit >> _end_point=true&version=2&softCommit=false} {commit=} 0 55 >> 88379 [http-bio-8080-exec-2] INFO >> org.apache.solr.update.processor.LogUpdateProcessor >> [quosa2-collection_shard1_replica1] webapp=/solr path=/update/extract >> params={commit=true&literal.id=pdf1} {commit=} 0 149 >> >> >> When I try to add the file again, I get another error. >> >> SimplePostTool version 1.5 >> Posting files to base url >> http://server:8080/solr/quosa2-collection/update/extract?literal.id=pdf1 >> using content-type text/pdf.. >> POSTing file 2008.Genomics.pdf >> SimplePostTool: WARNING: Solr returned an error #500 Internal Server Error >> SimplePostTool: WARNING: IOException while reading response: >> java.io.IOException: Server returned HTTP response code: 500 for URL: >> >> http://ec2-54-228-131-56.eu-west-1.compute.amazonaws.com:8080/solr/quosa2-co >> llection/update/extract?literal.id=pdf1 >> 1 files indexed. >> COMMITting Solr index changes to >> >> http://ec2-54-228-131-56.eu-west-1.compute.amazonaws.com:8080/solr/quosa2-co >> llection/update/extract?literal.id=pdf1.. >> Time spent: 0:00:00.341 >> >> Error Log >> >> 731088 [http-bio-8080-exec-8] INFO >> org.apache.solr.update.processor.LogUpdateProcessor >> [quosa2-collection_shard1_replica1] webapp=/solr path=/update/extract >> params={literal.id=pdf1} {} 0 170 >> 731094 [http-bio-8080-exec-8] ERROR >> org.apache.solr.servlet.SolrDispatchFilter >> null:java.lang.RuntimeException: java.lang.NoClassDefFoundError: Could not >> initialize class org.apache.pdfbox.pdmodel.PDPage >> at >> >> org.apache.solr.servlet.SolrDispatchFilter.sendError(SolrDispatchFilter.java >> :670) >> at >> >> org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: >> 380) >> at >> >> org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: >> 155) >> at >> >> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(Application >> FilterChain.java:243) >> at >> >> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterCh >> ain.java:210) >> at >> >> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.ja >> va:222) >> at >> >> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.ja >> va:123) >> at >> >> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:171 >> ) >> at >> >> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:99) >> at >> org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:947) >> at >> >> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java >> :118) >> at >> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:408) >> at >> >> org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Proce >> ssor.java:1009) >> at >> >> org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(Abstrac >> tProtocol.java:589) >> at >> >> org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java: >> 310) >> at >> >> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:11 >> 45) >> at >> >> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:6 >> 15) >> at java.lang.Thread.run(Thread.java:722) >> Caused by: java.lang.NoClassDefFoundError: Could not initialize class >> org.apache.pdfbox.pdmodel.PDPage >> at org.apache.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:212) >> at org.apache.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:184) >> at >> >> org.apache.pdfbox.pdmodel.PDDocumentCatalog.getAllPages(PDDocumentCatalog.ja >> va:211) >> at >> org.apache.pdfbox.util.PDFTextStripper.writeText(PDFTextStripper.java:328) >> at org.apache.tika.parser.pdf.PDF2XHTML.process(PDF2XHTML.java:72) >> at org.apache.tika.parser.pdf.PDFParser.parse(PDFParser.java:153) >> at >> org.apache.tika.parser.CompositeParser.parse(CompositeParser.java:242) >> at >> org.apache.tika.parser.CompositeParser.parse(CompositeParser.java:242) >> at >> org.apache.tika.parser.AutoDetectParser.parse(AutoDetectParser.java:120) >> at >> >> org.apache.solr.handler.extraction.ExtractingDocumentLoader.load(ExtractingD >> ocumentLoader.java:219) >> at >> >> org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentSt >> reamHandlerBase.java:74) >> at >> >> org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase. >> java:135) >> at >> >> org.apache.solr.core.RequestHandlers$LazyRequestHandlerWrapper.handleRequest >> (RequestHandlers.java:242) >> at org.apache.solr.core.SolrCore.execute(SolrCore.java:1816) >> at >> >> org.apache.solr.servlet.SolrDispatchFilter.execute(SolrDispatchFilter.java:6 >> 56) >> at >> >> org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: >> 359) >> ... 16 more >> >> 731110 [http-bio-8080-exec-9] INFO org.apache.solr.update.UpdateHandler >> start >> >> commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa >> lse,softCommit=false,prepareCommit=false} >> 731143 [http-bio-8080-exec-9] INFO org.apache.solr.core.SolrCore >> SolrDeletionPolicy.onCommit: commits:num=2 >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard1_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@7b2d9e10; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_16,generation=42,filenames=[segments_16] >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard1_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@7b2d9e10; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_17,generation=43,filenames=[segments_17] >> 731144 [http-bio-8080-exec-9] INFO org.apache.solr.core.SolrCore newest >> commit = 43[segments_17] >> 731145 [http-bio-8080-exec-9] INFO >> org.apache.solr.search.SolrIndexSearcher >> Opening Searcher@64148dd8 main >> 731146 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener sending requests to Searcher@64148dd8 >> main{StandardDirectoryReader(segments_15:9:nrt)} >> 731147 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener done. >> 731148 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore >> [quosa2-collection_shard1_replica1] Registered new searcher >> Searcher@64148dd8 main{StandardDirectoryReader(segments_15:9:nrt)} >> 731149 [http-bio-8080-exec-9] INFO org.apache.solr.update.UpdateHandler >> end_commit_flush >> 731149 [http-bio-8080-exec-9] INFO >> org.apache.solr.update.SolrCmdDistributor Distrib commit to:[StdNode: >> http://10.234.215.24:8080/solr/quosa2-collection_shard1_replica3/, >> StdNode: >> http://10.229.125.163:8080/solr/quosa2-collection_shard2_replica1/, >> StdNode: >> http://10.234.215.24:8080/solr/quosa2-collection_shard2_replica3/, >> StdNode: >> http://10.229.125.163:8080/solr/quosa2-collection_shard3_replica1/, >> StdNode: >> http://10.234.215.24:8080/solr/quosa2-collection_shard3_replica3/] >> >> params:commit_end_point=true&commit=true&softCommit=false&waitSearcher=true& >> expungeDeletes=false >> 731170 [http-bio-8080-exec-1] INFO org.apache.solr.update.UpdateHandler >> start >> >> commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa >> lse,softCommit=false,prepareCommit=false} >> 731174 [http-bio-8080-exec-10] INFO org.apache.solr.update.UpdateHandler >> >> start >> >> commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa >> lse,softCommit=false,prepareCommit=false} >> 731191 [http-bio-8080-exec-1] INFO org.apache.solr.core.SolrCore >> SolrDeletionPolicy.onCommit: commits:num=2 >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard3_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@782256a2; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_1a,generation=46,filenames=[segments_1a] >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard3_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@782256a2; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_1b,generation=47,filenames=[segments_1b] >> 731192 [http-bio-8080-exec-1] INFO org.apache.solr.core.SolrCore newest >> commit = 47[segments_1b] >> 731192 [http-bio-8080-exec-1] INFO >> org.apache.solr.search.SolrIndexSearcher >> Opening Searcher@49bbdad main >> 731193 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener sending requests to Searcher@49bbdad >> main{StandardDirectoryReader(segments_19:1:nrt)} >> 731200 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener done. >> 731202 [http-bio-8080-exec-10] INFO org.apache.solr.core.SolrCore >> SolrDeletionPolicy.onCommit: commits:num=2 >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard2_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@7d5549ce; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_1a,generation=46,filenames=[segments_1a] >> >> commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@ >> /www/so >> lr/home1/quosa2-collection_shard2_replica1/data/index >> lockFactory=org.apache.lucene.store.NativeFSLockFactory@7d5549ce; >> maxCacheMB=48.0 >> maxMergeSizeMB=4.0),segFN=segments_1b,generation=47,filenames=[segments_1b] >> 731202 [http-bio-8080-exec-10] INFO org.apache.solr.core.SolrCore >> newest >> commit = 47[segments_1b] >> 731203 [http-bio-8080-exec-10] INFO >> org.apache.solr.search.SolrIndexSearcher Opening Searcher@5ddf50fe main >> 731193 [http-bio-8080-exec-1] INFO org.apache.solr.update.UpdateHandler >> end_commit_flush >> 731205 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener sending requests to Searcher@5ddf50fe >> main{StandardDirectoryReader(segments_19:1:nrt)} >> 731205 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore >> QuerySenderListener done. >> 731207 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore >> [quosa2-collection_shard2_replica1] Registered new searcher >> Searcher@5ddf50fe main{StandardDirectoryReader(segments_19:1:nrt)} >> 731204 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore >> [quosa2-collection_shard3_replica1] Registered new searcher >> Searcher@49bbdad >> main{StandardDirectoryReader(segments_19:1:nrt)} >> 731207 [http-bio-8080-exec-10] INFO org.apache.solr.update.UpdateHandler >> >> end_commit_flush >> 731208 [http-bio-8080-exec-10] INFO >> org.apache.solr.update.processor.LogUpdateProcessor >> [quosa2-collection_shard2_replica1] webapp=/solr path=/update >> >> params={waitSearcher=true&commit=true&wt=javabin&expungeDeletes=false&commit >> _end_point=true&version=2&softCommit=false} {commit=} 0 35 >> 731210 [http-bio-8080-exec-1] INFO >> org.apache.solr.update.processor.LogUpdateProcessor >> [quosa2-collection_shard3_replica1] webapp=/solr path=/update >> >> params={waitSearcher=true&commit=true&wt=javabin&expungeDeletes=false&commit >> _end_point=true&version=2&softCommit=false} {commit=} 0 41 >> 731216 [http-bio-8080-exec-9] INFO >> org.apache.solr.update.processor.LogUpdateProcessor >> [quosa2-collection_shard1_replica1] webapp=/solr path=/update/extract >> params={commit=true&literal.id=pdf1} {commit=} 0 106 >> >> >> Does anyone have any idea how to resolve this? >> >> Thanks in advance >> >> Mark >> >> >> >> >> >> -- >> The Wellcome Trust Sanger Institute is operated by Genome Research >> Limited, a charity registered in England with number 1021457 and a >> company registered in England with number 2742969, whose registered >> office is 215 Euston Road, London, NW1 2BE. >> >> -- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE.
