Hi I am having an issue with adding pdf documents to a SolrCloud index I have setup.
I can index pdf documents fine using 4.3.0 on my local box, but I have a SolrCloud instance setup on the Amazon Cloud (Using 2 servers) and I get Error. It seems that it is not loading org.apache.pdfbox.pdmodel.PDPage. However, the jar is in the directory, and referenced in the solrconfig.xml file <lib dir="/www/solr/lib/contrib/extraction/lib" regex=".*\.jar" /> <lib dir="/www/solr/lib/" regex="solr-cell-\d.*\.jar" /> <lib dir="/www/solr/lib/contrib/clustering/lib/" regex=".*\.jar" /> <lib dir="/www/solr/lib/" regex="solr-clustering-\d.*\.jar" /> <lib dir="/www/solr/lib/contrib/langid/lib/" regex=".*\.jar" /> <lib dir="/www/solr/lib/" regex="solr-langid-\d.*\.jar" /> <lib dir="/www/solr/lib/contrib/velocity/lib" regex=".*\.jar" /> <lib dir="/www/solr/lib/" regex="solr-velocity-\d.*\.jar" /> When I start Tomcat, I can see that the file has loaded. 2705 [coreLoadExecutor-4-thread-3] INFO org.apache.solr.core.SolrResourceLoader Adding 'file:/www/solr/lib/contrib/extraction/lib/pdfbox-1.7.1.jar' to classloader But when I try to add a document. java -Durl=http://ec2-blah-blaheu-west-1.compute.amazonaws.com:8080/solr/quosa2-c ollection/update/extract -Dparams=literal.id=pdf1 -Dtype=text/pdf -jar post.jar 2008.Genomics.pdf I get this error. I¹m running on an Ubuntu machine. Linux ip-10-229-125-163 3.5.0-21-generic #32-Ubuntu SMP Tue Dec 11 18:51:59 UTC 2012 x86_64 x86_64 x86_64 GNU/Linux Error log. 88168 [http-bio-8080-exec-1] INFO org.apache.solr.update.processor.LogUpdateProcessor [quosa2-collection_shard1_replica1] webapp=/solr path=/update/extract params={literal.id=pdf1} {} 0 1534 88180 [http-bio-8080-exec-1] ERROR org.apache.solr.servlet.SolrDispatchFilter null:java.lang.RuntimeException: java.lang.UnsatisfiedLinkError: /usr/lib/jvm/java-7-oracle/jre/lib/amd64/xawt/libmawt.so: libXrender.so.1: cannot open shared object file: No such file or directory at org.apache.solr.servlet.SolrDispatchFilter.sendError(SolrDispatchFilter.java :670) at org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: 380) at org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: 155) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(Application FilterChain.java:243) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterCh ain.java:210) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.ja va:222) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.ja va:123) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:171 ) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:99) at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:947) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java :118) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:408) at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Proce ssor.java:1009) at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(Abstrac tProtocol.java:589) at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java: 310) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:11 45) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:6 15) at java.lang.Thread.run(Thread.java:722) Caused by: java.lang.UnsatisfiedLinkError: /usr/lib/jvm/java-7-oracle/jre/lib/amd64/xawt/libmawt.so: libXrender.so.1: cannot open shared object file: No such file or directory at java.lang.ClassLoader$NativeLibrary.load(Native Method) at java.lang.ClassLoader.loadLibrary1(ClassLoader.java:1939) at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1864) at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1825) at java.lang.Runtime.load0(Runtime.java:792) at java.lang.System.load(System.java:1059) at java.lang.ClassLoader$NativeLibrary.load(Native Method) at java.lang.ClassLoader.loadLibrary1(ClassLoader.java:1939) at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1864) at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1846) at java.lang.Runtime.loadLibrary0(Runtime.java:845) at java.lang.System.loadLibrary(System.java:1084) at sun.security.action.LoadLibraryAction.run(LoadLibraryAction.java:67) at sun.security.action.LoadLibraryAction.run(LoadLibraryAction.java:47) at java.security.AccessController.doPrivileged(Native Method) at java.awt.Toolkit.loadLibraries(Toolkit.java:1648) at java.awt.Toolkit.<clinit>(Toolkit.java:1670) at java.awt.Color.<clinit>(Color.java:275) at org.apache.pdfbox.pdmodel.PDPage.<clinit>(PDPage.java:72) at org.apache.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:212) at org.apache.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:184) at org.apache.pdfbox.pdmodel.PDDocumentCatalog.getAllPages(PDDocumentCatalog.ja va:211) at org.apache.pdfbox.util.PDFTextStripper.writeText(PDFTextStripper.java:328) at org.apache.tika.parser.pdf.PDF2XHTML.process(PDF2XHTML.java:72) at org.apache.tika.parser.pdf.PDFParser.parse(PDFParser.java:153) at org.apache.tika.parser.CompositeParser.parse(CompositeParser.java:242) at org.apache.tika.parser.CompositeParser.parse(CompositeParser.java:242) at org.apache.tika.parser.AutoDetectParser.parse(AutoDetectParser.java:120) at org.apache.solr.handler.extraction.ExtractingDocumentLoader.load(ExtractingD ocumentLoader.java:219) at org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentSt reamHandlerBase.java:74) at org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase. java:135) at org.apache.solr.core.RequestHandlers$LazyRequestHandlerWrapper.handleRequest (RequestHandlers.java:242) at org.apache.solr.core.SolrCore.execute(SolrCore.java:1816) at org.apache.solr.servlet.SolrDispatchFilter.execute(SolrDispatchFilter.java:6 56) at org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: 359) ... 16 more 88234 [http-bio-8080-exec-2] INFO org.apache.solr.update.UpdateHandler start commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa lse,softCommit=false,prepareCommit=false} 88268 [http-bio-8080-exec-2] INFO org.apache.solr.core.SolrCore SolrDeletionPolicy.onCommit: commits:num=2 commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard1_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@7b2d9e10; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_15,generation=41,filenames=[segments_15] commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard1_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@7b2d9e10; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_16,generation=42,filenames=[segments_16] 88268 [http-bio-8080-exec-2] INFO org.apache.solr.core.SolrCore newest commit = 42[segments_16] 88269 [http-bio-8080-exec-2] INFO org.apache.solr.search.SolrIndexSearcher Opening Searcher@6175f8cb main 88270 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener sending requests to Searcher@6175f8cb main{StandardDirectoryReader(segments_15:9:nrt)} 88271 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener done. 88273 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore [quosa2-collection_shard1_replica1] Registered new searcher Searcher@6175f8cb main{StandardDirectoryReader(segments_15:9:nrt)} 88273 [http-bio-8080-exec-2] INFO org.apache.solr.update.UpdateHandler end_commit_flush 88288 [http-bio-8080-exec-2] INFO org.apache.solr.update.SolrCmdDistributor Distrib commit to:[StdNode: http://10.234.215.24:8080/solr/quosa2-collection_shard1_replica3/, StdNode: http://10.229.125.163:8080/solr/quosa2-collection_shard2_replica1/, StdNode: http://10.234.215.24:8080/solr/quosa2-collection_shard2_replica3/, StdNode: http://10.229.125.163:8080/solr/quosa2-collection_shard3_replica1/, StdNode: http://10.234.215.24:8080/solr/quosa2-collection_shard3_replica3/] params:commit_end_point=true&commit=true&softCommit=false&waitSearcher=true& expungeDeletes=false 88321 [http-bio-8080-exec-3] INFO org.apache.solr.update.UpdateHandler start commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa lse,softCommit=false,prepareCommit=false} 88334 [http-bio-8080-exec-4] INFO org.apache.solr.update.UpdateHandler start commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa lse,softCommit=false,prepareCommit=false} 88351 [http-bio-8080-exec-3] INFO org.apache.solr.core.SolrCore SolrDeletionPolicy.onCommit: commits:num=2 commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard2_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@7d5549ce; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_19,generation=45,filenames=[segments_19] commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard2_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@7d5549ce; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_1a,generation=46,filenames=[segments_1a] 88354 [http-bio-8080-exec-3] INFO org.apache.solr.core.SolrCore newest commit = 46[segments_1a] 88357 [http-bio-8080-exec-3] INFO org.apache.solr.search.SolrIndexSearcher Opening Searcher@775f6084 main 88360 [http-bio-8080-exec-4] INFO org.apache.solr.core.SolrCore SolrDeletionPolicy.onCommit: commits:num=2 commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard3_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@782256a2; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_19,generation=45,filenames=[segments_19] commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard3_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@782256a2; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_1a,generation=46,filenames=[segments_1a] 88362 [http-bio-8080-exec-4] INFO org.apache.solr.core.SolrCore newest commit = 46[segments_1a] 88363 [http-bio-8080-exec-4] INFO org.apache.solr.search.SolrIndexSearcher Opening Searcher@4a2415c5 main 88364 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener sending requests to Searcher@4a2415c5 main{StandardDirectoryReader(segments_19:1:nrt)} 88365 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener done. 88367 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore [quosa2-collection_shard3_replica1] Registered new searcher Searcher@4a2415c5 main{StandardDirectoryReader(segments_19:1:nrt)} 88367 [http-bio-8080-exec-4] INFO org.apache.solr.update.UpdateHandler end_commit_flush 88368 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener sending requests to Searcher@775f6084 main{StandardDirectoryReader(segments_19:1:nrt)} 88368 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener done. 88367 [http-bio-8080-exec-4] INFO org.apache.solr.update.processor.LogUpdateProcessor [quosa2-collection_shard3_replica1] webapp=/solr path=/update params={waitSearcher=true&commit=true&wt=javabin&expungeDeletes=false&commit _end_point=true&version=2&softCommit=false} {commit=} 0 33 88371 [http-bio-8080-exec-3] INFO org.apache.solr.update.UpdateHandler end_commit_flush 88370 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore [quosa2-collection_shard2_replica1] Registered new searcher Searcher@775f6084 main{StandardDirectoryReader(segments_19:1:nrt)} 88376 [http-bio-8080-exec-3] INFO org.apache.solr.update.processor.LogUpdateProcessor [quosa2-collection_shard2_replica1] webapp=/solr path=/update params={waitSearcher=true&commit=true&wt=javabin&expungeDeletes=false&commit _end_point=true&version=2&softCommit=false} {commit=} 0 55 88379 [http-bio-8080-exec-2] INFO org.apache.solr.update.processor.LogUpdateProcessor [quosa2-collection_shard1_replica1] webapp=/solr path=/update/extract params={commit=true&literal.id=pdf1} {commit=} 0 149 When I try to add the file again, I get another error. SimplePostTool version 1.5 Posting files to base url http://server:8080/solr/quosa2-collection/update/extract?literal.id=pdf1 using content-type text/pdf.. POSTing file 2008.Genomics.pdf SimplePostTool: WARNING: Solr returned an error #500 Internal Server Error SimplePostTool: WARNING: IOException while reading response: java.io.IOException: Server returned HTTP response code: 500 for URL: http://ec2-54-228-131-56.eu-west-1.compute.amazonaws.com:8080/solr/quosa2-co llection/update/extract?literal.id=pdf1 1 files indexed. COMMITting Solr index changes to http://ec2-54-228-131-56.eu-west-1.compute.amazonaws.com:8080/solr/quosa2-co llection/update/extract?literal.id=pdf1.. Time spent: 0:00:00.341 Error Log 731088 [http-bio-8080-exec-8] INFO org.apache.solr.update.processor.LogUpdateProcessor [quosa2-collection_shard1_replica1] webapp=/solr path=/update/extract params={literal.id=pdf1} {} 0 170 731094 [http-bio-8080-exec-8] ERROR org.apache.solr.servlet.SolrDispatchFilter null:java.lang.RuntimeException: java.lang.NoClassDefFoundError: Could not initialize class org.apache.pdfbox.pdmodel.PDPage at org.apache.solr.servlet.SolrDispatchFilter.sendError(SolrDispatchFilter.java :670) at org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: 380) at org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: 155) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(Application FilterChain.java:243) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterCh ain.java:210) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.ja va:222) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.ja va:123) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:171 ) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:99) at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:947) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java :118) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:408) at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Proce ssor.java:1009) at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(Abstrac tProtocol.java:589) at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java: 310) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:11 45) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:6 15) at java.lang.Thread.run(Thread.java:722) Caused by: java.lang.NoClassDefFoundError: Could not initialize class org.apache.pdfbox.pdmodel.PDPage at org.apache.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:212) at org.apache.pdfbox.pdmodel.PDPageNode.getAllKids(PDPageNode.java:184) at org.apache.pdfbox.pdmodel.PDDocumentCatalog.getAllPages(PDDocumentCatalog.ja va:211) at org.apache.pdfbox.util.PDFTextStripper.writeText(PDFTextStripper.java:328) at org.apache.tika.parser.pdf.PDF2XHTML.process(PDF2XHTML.java:72) at org.apache.tika.parser.pdf.PDFParser.parse(PDFParser.java:153) at org.apache.tika.parser.CompositeParser.parse(CompositeParser.java:242) at org.apache.tika.parser.CompositeParser.parse(CompositeParser.java:242) at org.apache.tika.parser.AutoDetectParser.parse(AutoDetectParser.java:120) at org.apache.solr.handler.extraction.ExtractingDocumentLoader.load(ExtractingD ocumentLoader.java:219) at org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentSt reamHandlerBase.java:74) at org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase. java:135) at org.apache.solr.core.RequestHandlers$LazyRequestHandlerWrapper.handleRequest (RequestHandlers.java:242) at org.apache.solr.core.SolrCore.execute(SolrCore.java:1816) at org.apache.solr.servlet.SolrDispatchFilter.execute(SolrDispatchFilter.java:6 56) at org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java: 359) ... 16 more 731110 [http-bio-8080-exec-9] INFO org.apache.solr.update.UpdateHandler start commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa lse,softCommit=false,prepareCommit=false} 731143 [http-bio-8080-exec-9] INFO org.apache.solr.core.SolrCore SolrDeletionPolicy.onCommit: commits:num=2 commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard1_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@7b2d9e10; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_16,generation=42,filenames=[segments_16] commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard1_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@7b2d9e10; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_17,generation=43,filenames=[segments_17] 731144 [http-bio-8080-exec-9] INFO org.apache.solr.core.SolrCore newest commit = 43[segments_17] 731145 [http-bio-8080-exec-9] INFO org.apache.solr.search.SolrIndexSearcher Opening Searcher@64148dd8 main 731146 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener sending requests to Searcher@64148dd8 main{StandardDirectoryReader(segments_15:9:nrt)} 731147 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener done. 731148 [searcherExecutor-6-thread-1] INFO org.apache.solr.core.SolrCore [quosa2-collection_shard1_replica1] Registered new searcher Searcher@64148dd8 main{StandardDirectoryReader(segments_15:9:nrt)} 731149 [http-bio-8080-exec-9] INFO org.apache.solr.update.UpdateHandler end_commit_flush 731149 [http-bio-8080-exec-9] INFO org.apache.solr.update.SolrCmdDistributor Distrib commit to:[StdNode: http://10.234.215.24:8080/solr/quosa2-collection_shard1_replica3/, StdNode: http://10.229.125.163:8080/solr/quosa2-collection_shard2_replica1/, StdNode: http://10.234.215.24:8080/solr/quosa2-collection_shard2_replica3/, StdNode: http://10.229.125.163:8080/solr/quosa2-collection_shard3_replica1/, StdNode: http://10.234.215.24:8080/solr/quosa2-collection_shard3_replica3/] params:commit_end_point=true&commit=true&softCommit=false&waitSearcher=true& expungeDeletes=false 731170 [http-bio-8080-exec-1] INFO org.apache.solr.update.UpdateHandler start commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa lse,softCommit=false,prepareCommit=false} 731174 [http-bio-8080-exec-10] INFO org.apache.solr.update.UpdateHandler start commit{,optimize=false,openSearcher=true,waitSearcher=true,expungeDeletes=fa lse,softCommit=false,prepareCommit=false} 731191 [http-bio-8080-exec-1] INFO org.apache.solr.core.SolrCore SolrDeletionPolicy.onCommit: commits:num=2 commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard3_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@782256a2; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_1a,generation=46,filenames=[segments_1a] commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard3_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@782256a2; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_1b,generation=47,filenames=[segments_1b] 731192 [http-bio-8080-exec-1] INFO org.apache.solr.core.SolrCore newest commit = 47[segments_1b] 731192 [http-bio-8080-exec-1] INFO org.apache.solr.search.SolrIndexSearcher Opening Searcher@49bbdad main 731193 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener sending requests to Searcher@49bbdad main{StandardDirectoryReader(segments_19:1:nrt)} 731200 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener done. 731202 [http-bio-8080-exec-10] INFO org.apache.solr.core.SolrCore SolrDeletionPolicy.onCommit: commits:num=2 commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard2_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@7d5549ce; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_1a,generation=46,filenames=[segments_1a] commit{dir=NRTCachingDirectory(org.apache.lucene.store.MMapDirectory@/www/so lr/home1/quosa2-collection_shard2_replica1/data/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@7d5549ce; maxCacheMB=48.0 maxMergeSizeMB=4.0),segFN=segments_1b,generation=47,filenames=[segments_1b] 731202 [http-bio-8080-exec-10] INFO org.apache.solr.core.SolrCore newest commit = 47[segments_1b] 731203 [http-bio-8080-exec-10] INFO org.apache.solr.search.SolrIndexSearcher Opening Searcher@5ddf50fe main 731193 [http-bio-8080-exec-1] INFO org.apache.solr.update.UpdateHandler end_commit_flush 731205 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener sending requests to Searcher@5ddf50fe main{StandardDirectoryReader(segments_19:1:nrt)} 731205 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore QuerySenderListener done. 731207 [searcherExecutor-7-thread-1] INFO org.apache.solr.core.SolrCore [quosa2-collection_shard2_replica1] Registered new searcher Searcher@5ddf50fe main{StandardDirectoryReader(segments_19:1:nrt)} 731204 [searcherExecutor-5-thread-1] INFO org.apache.solr.core.SolrCore [quosa2-collection_shard3_replica1] Registered new searcher Searcher@49bbdad main{StandardDirectoryReader(segments_19:1:nrt)} 731207 [http-bio-8080-exec-10] INFO org.apache.solr.update.UpdateHandler end_commit_flush 731208 [http-bio-8080-exec-10] INFO org.apache.solr.update.processor.LogUpdateProcessor [quosa2-collection_shard2_replica1] webapp=/solr path=/update params={waitSearcher=true&commit=true&wt=javabin&expungeDeletes=false&commit _end_point=true&version=2&softCommit=false} {commit=} 0 35 731210 [http-bio-8080-exec-1] INFO org.apache.solr.update.processor.LogUpdateProcessor [quosa2-collection_shard3_replica1] webapp=/solr path=/update params={waitSearcher=true&commit=true&wt=javabin&expungeDeletes=false&commit _end_point=true&version=2&softCommit=false} {commit=} 0 41 731216 [http-bio-8080-exec-9] INFO org.apache.solr.update.processor.LogUpdateProcessor [quosa2-collection_shard1_replica1] webapp=/solr path=/update/extract params={commit=true&literal.id=pdf1} {commit=} 0 106 Does anyone have any idea how to resolve this? Thanks in advance Mark -- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE.