Re: [R] fold change calculation

2012-11-17 Thread David Winsemius
On Nov 17, 2012, at 9:55 AM, Vittoria Roncalli wrote: Hi, I am really new to edge R and I have used it to calculate gene expression with RNASeq data comparing 2 different conditions. I used a P value of 0.05 and I got a list of DGE contigs up and down regulated. WhatI was wondering is how to

[R] fold change calculation

2012-11-17 Thread Vittoria Roncalli
Hi, I am really new to edge R and I have used it to calculate gene expression with RNASeq data comparing 2 different conditions. I used a P value of 0.05 and I got a list of DGE contigs up and down regulated. WhatI was wondering is how to convert the logFC value that appear in the output of the exa