It is working fine.
Thanks
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Sent from the R help mailing list archive at Nabble.com.
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https:/
I am working on Latex and R and using following code.
<>=
infile<-read.table("test.txt",sep="\t")
Col3 <- unique(infile[,3])
LCol3 <- length(Col3)
for (i in 1:LCol3) {
print(paste("Column", Col3[i]))
print(infile[infile[,3]==Col3[i],-3])
}
@
I am getting following output.
1] "Column C" V1 V2
Hello R friends,
I want to use my R script in VB to make macro in Excel.
I tried with RExcel but it seems to me that this package is just GUI API
and I still have to run(connect) R to use the script.
Google tells me there are some ways to make R script as an independent
library/module/header so th
Hello,
Try
text="
fish fam length
1 a 71.46
2 a 71.06
3 a 62.94
4 b 79.46
5 b 52.38
6 b 56.78
7 b 92.08
8 c 96.86
9 d 98.09
10 d 17.23
11 d 98.35
12 d 82.43
13 e 83.85
14 e 33.92
15 e 23.16
16 e 31.39
17 e 57.08
18 e 27.05
19 f 62.38
20 f 83.21
21 f 18.72
22 f 84.32
23 g 15.99
24 h 40.33
25 h 92.
Dear R-list,
I am trying to visualize where the dropout happens in our patient flow. We are
currently using traditional flowcharts and it bothers me that I can't visualize
both the percentage and the flow in one diagram.
The other day I came across some interesting diagrams doing exactly what I
This is quite a CPu consuming process. My system got hung up for the
big file I have.
Within the for loop that you have suggested, can't I have a case
statement for different value of nfields to be read and specify what
format does the variable needs to be read?
something like
case
# input format
On Mar 18, 2012, at 4:43 PM, Dajiang Liu wrote:
Dear All,
I have a seemingly very simple question, but I just cannot figure
out the answer. I attempted to run the
following:a=0.1*(1:9);which(a==0.3);it returns integer(0). But
obviously, the third element of a is equal to 0.3.
I must have
Hello, I am both new to this forum and to R. Therefore apologies if I am
posting a request for help for something overly simple and/or that has
already been covered in past posts. I would really appreciate some simple
and straightforward help on how to plot a Rickers growth curve with
confidence
Dear All,
I have a seemingly very simple question, but I just cannot figure out the
answer. I attempted to run the following:a=0.1*(1:9);which(a==0.3);it returns
integer(0). But obviously, the third element of a is equal to 0.3.
I must have missed something. Can someone kindly explain why? Than
Is there any way to know how the "dmvt" function computes the hypergeometric
function needed in the calculation for the density of multivariate t
distribution?
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Sent from the
Hi,
I have a list of 1787 fish from 948 full-sib families and their lengths. My
table looks like this,
fishfam length
1 a 71.46
2 a 71.06
3 a 62.94
4 b 79.46
5 b 52.38
6 b 56.78
7 b 92.08
8 c 9
The file that you set was readable. The majority of the fields were
comma separated, so I use the comma as the field separator in the
'read.table'. The 'tab' character appears to be the separator between
the date and time and this does not prevent reading in the data, or
parsing it later. So her
Say I fit a logistic model and want to calculate an odds ratio between 2
sets of predictors. It is easy to obtain the difference in the predicted
logodds using the predict() function, and thus get a point-estimate OR. But
I can't see how to obtain the confidence interval for such an OR.
For exa
Thank you for your time, Thomas .
In case the questioner is not aware of a few facts... Thomas Lumley is both a)
the person who originally ported tThereau's "survival" package to R and was
also its maintainer for many years , and b) the author of the "survey" package
--
David
Sent from my iPho
On Mar 18, 2012, at 3:17 PM, Daniel Malter wrote:
> Assume your year value is
>
> x<-007/A
>
> You want to replace all non-numeric characters (i.e. letters and
> punctuation) and all zeros with nothing.
>
> gsub('[[:alpha:]]|[[:punct:]]|0','',x)
>
> Let's say you have a vector with both mo
On 12-03-17 8:15 PM, Ted Stankowich wrote:
Hello!
I've been running a looped AIC analysis using several modules including
ape, nlme, and MuMIn, and during one particularly long analysis, R (ver
2.14.12) crashes several minutes into the routine with the simple
message "R for windows GUI front-end
You attachment never made it through. Try sending it as '.txt' file.
If the file is using both tabs and commas on the same line, then you
may have to use 'readLines' to read it in, and then 'strsplit' to
split out the different elements.
On Sun, Mar 18, 2012 at 4:13 PM, Santiago Guallar wrote:
>
On 12-03-18 5:31 AM, Ajay Askoolum wrote:
If I create a data.frame using session variables as follows:
classResults<-data.frame(subjEnglish,gradeEnglish,subjFrench,gradeFrench,row.names=studentName)
How can I remove the variables? I tried
rm(names(classResults))
Error in rm(names(classResul
On Mon, Mar 19, 2012 at 10:27 AM, David Winsemius
wrote:
>
> On Mar 18, 2012, at 3:54 PM, Thomas Lumley wrote:
>
>> On Mon, Mar 19, 2012 at 6:34 AM, David Winsemius
>> wrote:
>>>
>>>
>>> On Mar 16, 2012, at 1:09 PM, niloo javan wrote:
>>>
hi
i want to analyze Right Censore-Length bias d
Hello,
I'm trying to import into R files that contain data downloaded from logger
devices as files with the following formats:
.act
.lig
.trj
.trn
These files are essentially text files but use both tabs and commas as
separators.
I've tried the function scan:
1) scan("filename.act", what=charact
On Mar 18, 2012, at 3:54 PM, Thomas Lumley wrote:
On Mon, Mar 19, 2012 at 6:34 AM, David Winsemius > wrote:
On Mar 16, 2012, at 1:09 PM, niloo javan wrote:
hi
i want to analyze Right Censore-Length bias data under cox model
with
covariate.
what is the package ?
I initially left this qu
On Mar 18, 2012, at 3:07 PM, mail me wrote:
Hi:
Thanks for reply. I am using the following statement
res <- with(df, table(paste(item1, item2, sep=', ')) )
to get the frequency counts of the rows, which gives the following
output:
milk,bread 2
bread,butter 1
beer,diaper 3
milk,bread 2
Y
Dear R People:
Is anyone going to attend the Cajun Code-a-thon in Lafayette, LA from
4/27 - 4/28, please?
I'd like to set up a team using R.
You can reply to me if you wish.
Thanks,
Erin
--
Erin Hodgess
Associate Professor
Department of Computer and Mathematical Sciences
University of Housto
> My current question is there a way to perform the same count, but with
> an arbitrary size pattern. In other words, instead of a fixed pattern
> size of 3, could I have a pattern size of 4, 5, 6, ..., 30 any of which
> that could be run without changing the script?
Of course you cannot do this
On Sat, 17 Mar 2012, uday wrote:
> I am using following codes to plot map
>
> library(sp)
> library(rgdal)
> library(maps)
> library(gplots)
> library(clim.pact)
> library(fields)
> source("/R/PlotGridded2DMap.R")
> source("/R/image.plot.fix.R")
> source("/R/image.plot.plt.fix.r")
>
> seasonal_pl
Hi,
I have a dataframe basically like this:
> head(asturias.gen2011[,c(1,4,9:14)])
municipio total upyd psoeppiu factipo
440 Allande 2031 1.44 31.10 39.75 4.01 21.62 1000-1
443Aller 12582 1.37 33.30 37.09 15.53 10.35 1-5000
On Mon, Mar 19, 2012 at 6:34 AM, David Winsemius wrote:
>
> On Mar 16, 2012, at 1:09 PM, niloo javan wrote:
>
>> hi
>> i want to analyze Right Censore-Length bias data under cox model with
>> covariate.
>> what is the package ?
>
>
> I initially left this question alone because I thought there mig
Hi:
Thanks for reply. I am using the following statement
res <- with(df, table(paste(item1, item2, sep=', ')) )
to get the frequency counts of the rows, which gives the following output:
milk,bread 2
bread,butter 1
beer,diaper 3
milk,bread 2
But I need to extract from the above result two vector
Assume your year value is
x<-007/A
You want to replace all non-numeric characters (i.e. letters and
punctuation) and all zeros with nothing.
gsub('[[:alpha:]]|[[:punct:]]|0','',x)
Let's say you have a vector with both month and year values (you can
separate them). Now we need to identify the c
On Mar 18, 2012, at 2:24 PM, Marc Girondot wrote:
Assign can be used to set a value to a variable that has name as a
value of another variable. Example:
name<-"essai"
assign(name, "plouf")
essai
[1] "plouf"
OK.
But how to do the same when it is only an element of a vector, data
frame an
Do not use assign(). It is a relic from the 1980s.
Instead, decide where you want your
variables to live, perhaps in a list,
where<-list()
or perhaps in an environment,
where<-new.env()
or
where<-environment().
Then use where[[varName]] to refer to the variable. You can
use further subse
Assign can be used to set a value to a variable that has name as a value of
another variable. Example:
> name<-"essai"
> assign(name, "plouf")
> essai
[1] "plouf"
OK.
But how to do the same when it is only an element of a vector, data frame and
so on that must be changed.
> vec<-1:10
> vec
[1
persp() is not really designed to do that.
rgl has a nice interface that allows this sort of things with its
persp3d() function.
Uwe Ligges
On 07.03.2012 11:01, Simone Tenan wrote:
Hi all,
I need to plot two intersecting planes in a graph. Using persp() function
(see code below) I am not ab
On 13.03.2012 07:15, Daniel Nordlund wrote:
I am trying to resolve a problem I am having with running the rattle package on
two different Windows 7 x64 systems. It appears to be a problem with my two
specific systems, because others on Windows 7 x64 systems aren't complaining
about this pro
On Mar 16, 2012, at 1:09 PM, niloo javan wrote:
hi
i want to analyze Right Censore-Length bias data under cox model
with covariate.
what is the package ?
I initially left this question alone because I thought there might be
viewers for whom it all made perfect sense. After two days that
On 13.03.2012 18:18, Li, Yan wrote:
HI All,
I got the error : package is not installed for 'arch=x64' when building my own
package for 64bit R. How can I configure the arch ? The 'R CMD config' does not
work. Thank you very much!
Which OS?
If Linux: run R with the desired architecture an
Not really answering your question but as an alternative suggestion you can
get a nice gui/ide for R on a server by using Rstudio server, which is for
Linux only. That way you won't need Windows at all.
http://rstudio.org/
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On 18.03.2012 15:39, Eric Elguero wrote:
Hi everybody,
I have to run under Ubuntu a programs repeatedly
with different arguments and I am using R just to
generate the data files and call the external program.
basically, in my script I have inside a loop these two lines:
command<- paste(,sep=
On Mar 17, 2012, at 9:45 AM, phi771 wrote:
Hello!
I have a problem creating a fitting plane through my 3d-data set.
here is a
sample how my set looks like (x,y,z (with z increasing)):
dataset
[,1] [,2] [,3]
[1,] -1.3712 -3.1551 10
[2,] -1.2690 -3.0751 10
[
your "not sepcial" stuff and afterwards add your special data with a
call to points() in, e.g. anotehr color. If you want to separate plots,
look at then lattice package.
Uwe Ligges
On 14.03.2012 15:16, sybil kennelly wrote:
Hi Guys, this is actually a thread of emails, but for some reason,
Hi
How does mlogit count the p-values of the variables?
Ville
[[alternative HTML version deleted]]
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PLEASE do read the posting guide http://www.R-project.org/posti
On 18.03.2012 15:35, Henry wrote:
I can save to png, TIFF and jpg but get an error "Error: invalid graphics
state" when trying to save as pdf and I have to restart R.
This happens when I add mtext lines.
There are a few other questions e.g. I want to move the mtext on side 1 to
the left, but
On 15.03.2012 13:47, Marc Marí Dell'Olmo wrote:
I obtain this message:
Error: C stack usage is too close to the limit
Using the function inla.read.graph?
Then please ask the corresponding package maintainer.
Uwe Ligges
Marc Marí-Dell'Olmo
CIBER Epidemiología y Salud Pública
Servei de S
I've definitely encountered problems when running programs without
administrator righs. Perhaps that was down to virus/spyware protection software.
At this linkhttp://forums.techarena.in/windows-software/1258938.htm there is
the following suggestion
1.Click on Start
2.Type Run in Search and h
On 18.03.2012 01:15, Ted Stankowich wrote:
Hello!
I've been running a looped AIC analysis using several modules including
ape, nlme, and MuMIn, and during one particularly long analysis, R (ver
2.14.12) crashes several minutes into the routine with the simple
message "R for windows GUI front-en
On 17.03.2012 10:19, Joshua Wiley wrote:
What about just setting them to missing and plotting?
md<- yourdata
md[md==0]<- NA
My other idea depending how you want the plot to look would be to try something
where 0 values get a blank colour or null plotting value
Or the OP is going to just
My thought is that your question seems to be about StatET/Eclipse rather than
R, so this may not be the best place to ask.
I don't know the answer, but since Eclipse works on Linux as well, that might
be an option. I also think RStudio might be able to utilize a remote server. As
to whether you
On Mar 18, 2012, at 11:37 AM, David Winsemius wrote:
On Mar 18, 2012, at 10:44 AM, irene wrote:
Hello,
I have a file which contains a column with age, which is
represented in the
two following patterns
1. "007/A" or ''007/a" or ''7 /a" . In this case A or a means
year and I
would
L.S.
On 03/18/2012 02:39 PM, Mag Gam wrote:
correct, but for StatET i believe I can only use the local R installed
to do my computation. My intention is to use my Linux server -- which
as 128GB of memory and 32 cores to do my calculations and I want to
connect to it via Windows Eclipse GUI.
T
On Mar 18, 2012, at 08:21 , shoreliner11 wrote:
> I'm still relatively new to R but was wondering if anyone could help me force
> R to compute the f-statistic etc using the the nested term rather than the
> residual. In my particular case we were nesting a treatment effect by a
> replicated tank
On Mar 18, 2012, at 10:44 AM, irene wrote:
Hello,
I have a file which contains a column with age, which is represented
in the
two following patterns
1. "007/A" or ''007/a" or ''7 /a" . In this case A or a means
year and I
would like to extract only the numeric values eg 7 in the abov
On 18.03.2012 07:44, AAsk wrote:
I am using 2.14.2 and use CTL+C& CTL+V all the time without any
surprises; it simply works.
I suspect that you are using 2.14.2 on Windows 7 computer as user who
does not have Administrator provileges. If that is the case, by
default, R will not have access to
Hello,
I have a file which contains a column with age, which is represented in the
two following patterns
1. "007/A" or ''007/a" or ''7 /a" . In this case A or a means year and I
would like to extract only the numeric values eg 7 in the above case if this
pattern exits in a line of file.
2.
Dear Rowan,
As you can see, the error message in your email did not come through,
probably because you posted your message in HTML, which isn't accepted by
the r-help list (see the mailing-list instructions).
I'm going to guess that you're working on Mac OS X.
If the Rcmdr package was successfu
On 16.03.2012 18:08, Erin Hodgess wrote:
Dear R People:
I'm not sure if I should ask this here or in Rcpp,
Why is this related to Rcpp?
but I thought I'd
start here first.
If I'm writing a C program, when do I know to use SEXP vs. int or float, please?
For very short:
If you want keep
Dear All,
There are two packages which can be used for sensitivtiy analysis when the
predictor variables are correlated.
a: pcc (partial correlation coefficient) in R sensitivity package
b: varimp in R party package (conditional importance)
Are other R packages available for sensitivity anlaysi
Hi everybody,
I have to run under Ubuntu a programs repeatedly
with different arguments and I am using R just to
generate the data files and call the external program.
basically, in my script I have inside a loop these two lines:
command <- paste(,sep="")
system(command,intern=T,wait=T)
when I
I can save to png, TIFF and jpg but get an error "Error: invalid graphics
state" when trying to save as pdf and I have to restart R.
This happens when I add mtext lines.
There are a few other questions e.g. I want to move the mtext on side 1 to
the left, but that is the main issue for now.
I'm no
On 18.03.2012 14:31, mail me wrote:
Hi:
Suppose I create the dataframe df using the following code:
df<- data.frame( item1 = c('milk',
'bread','beer','beer','milk','beer'), item2 =c('bread',
'butter','diaper','diaper','bread', 'diaper'), stringsAsFactors = F);
df
item1 item2
1 milk br
Hi:
Suppose I create the dataframe df using the following code:
df <- data.frame( item1 = c('milk',
'bread','beer','beer','milk','beer'), item2 =c('bread',
'butter','diaper','diaper','bread', 'diaper'), stringsAsFactors = F);
df
item1 item2
1 milk bread
2 bread butter
3 beer diaper
4 bee
Hi,
I do not understand why you want to do
that but
both Eclipse and StatEt are available
for Linux environment.
Then, you can have everything running on Linux
http://www.eclipse.org/downloads/
http://www.walware.de/goto/statet
Jose
On 13.03.2012 15:40, RMSOPS wrote:
Hello
Error: could not find function sqldf:
Hello, I'm using R Studio, and installed the option of installing the
packages sqldbf function.
But When I run the code give the next error.
install.packages("sqldf")
library("RSQLite")
require(sqldf)
x<-
On 18.03.2012 05:47, Lorenzo Cattarino wrote:
Hi R users,
Working from a PC, I am trying to install the spatstat package on a Unix
cluster. I created the following PBS file to send a job array:
#!/bin/bash -ue
#PBS -m ae
#PBS -M my email
#PBS -J 1-45
#PBS -A my username
#PBS -N job name
#PB
correct, but for StatET i believe I can only use the local R installed
to do my computation. My intention is to use my Linux server -- which
as 128GB of memory and 32 cores to do my calculations and I want to
connect to it via Windows Eclipse GUI.
On Sun, Mar 18, 2012 at 9:13 AM, jose Bartolome
? table
First however confirm "that milk,bread" is a single datum. str() should do this
Can you post a sample of the data here using dput()?
John Kane
Kingston ON Canada
> -Original Message-
> From: mailme...@googlemail.com
> Sent: Sun, 18 Mar 2012 13:12:48 +0200
> To: r-help@r-project
Hello,
I am currently running R on ubuntu and everything is working perfectly
fine. However, I would like to connect to R via Windows using Eclipse
StatEt plugin. Is this possible to do? or do I have to have a version
of R running on Windows also? I prefer to have Linux do the heavy
lifting and Wi
Hi:
I have a dataframe containing comma seperated group of words such as
milk,bread
bread,butter
beer,diaper
beer,diaper
milk,bread
beer,diaper
I want to output the frequency of occurrence of comma separated words
for each row and collapse duplicate rows, to make the output as shown
in the follo
to remove an individual column:
classResults$subjEnglish <- NULL
to remove object:
rm(classResults)
to access student names:
row.names(classResults)
Sent from my iPad
On Mar 18, 2012, at 5:31, Ajay Askoolum wrote:
> If I create a data.frame using session variables as follows:
>
> classRes
I'm still relatively new to R but was wondering if anyone could help me force
R to compute the f-statistic etc using the the nested term rather than the
residual. In my particular case we were nesting a treatment effect by a
replicated tank which was not non-significant enough (p>0.25)to be droppe
On 03/18/2012 02:00 PM, Jie Tang wrote:
I have found that the dimension number of label must be equal with the
dimension of the plot data by your this method.
if we have two data in every hour,it seems can not show the correct
tickment?
.plot(1:20, xaxt = "n")
axis(1, at = 1:10, label = paste(1:
If I create a data.frame using session variables as follows:
classResults<-data.frame(subjEnglish,gradeEnglish,subjFrench,gradeFrench,row.names=studentName)
How can I remove the variables? I tried
> rm(names(classResults))
Error in rm(names(classResults)) :
... must contain names or characte
On 17/03/2012 20:42, jim holtman wrote:
Another suggestion is to start with a subset of the data file to see
how much memory is required for your processing. One of the
misconceptions is that "memory is free". People think that with
virtual memory and other such tools, that there is no restrict
Hi R users,
Working from a PC, I am trying to install the spatstat package on a Unix
cluster. I created the following PBS file to send a job array:
#!/bin/bash -ue
#PBS -m ae
#PBS -M my email
#PBS -J 1-45
#PBS -A my username
#PBS -N job name
#PBS -l resources
#PBS -l walltime
cd $PBS_O_WORKDIR
Hi,
I have recently installed R on my mac and am trying to install R commander.
When I type:
install.packages("Rcmdr",dependencies=TRUE)
the following message appears
I have also tried installing commander via the package installer window.
When I do this a large number of error messages (over 50)
Yes, that was the problem.
Now it's solved.
Thanks a lot,
Dong-Joon
On Sat, Mar 17, 2012 at 6:38 AM, R. Michael Weylandt <
michael.weyla...@gmail.com> wrote:
> My guess is that you're not getting what you expect from operator
> precedence: note that
>
> 1:3 - 1
> 1:(3-1) #Not equal
>
> If that
I need to convert dbf/csv data to an ESRI shape file consisting of 200,000
polylines in R. I used the package "shapefiles" that can create small shape
files. I found it takes too much time for create 200,000 polylines. I
checked the source codes and found R loop is used. I guess it may be the
r
Hello!
I've been running a looped AIC analysis using several modules including
ape, nlme, and MuMIn, and during one particularly long analysis, R (ver
2.14.12) crashes several minutes into the routine with the simple
message "R for windows GUI front-end has stopped working". I'm using a
brand
I am using 2.14.2 and use CTL+C & CTL+V all the time without any
surprises; it simply works.
I suspect that you are using 2.14.2 on Windows 7 computer as user who
does not have Administrator provileges. If that is the case, by
default, R will not have access to the clipboard, hence the failures.
T
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