Re: New: biology/hmmer

2016-11-21 Thread Senthil Kumar M
Hi Ports, May I request some developer to have a look and commit this port? Earlier, jca made a few changes (attached) and commented that the port looked good. I also tested it once again and it installs, runs as expected. Senthil On Sat, 12 Nov 2016, Senthil Kumar M wrote: > > &g

Re: New: biology/hmmer

2016-11-12 Thread Senthil Kumar M
On Sat, 12 Nov 2016, Jeremie Courreges-Anglas wrote: > Senthil Kumar M writes: > > > Hello ports, > > > > HMMER is used for searching sequence databases for sequence homologs, > > and for making sequence alignments. It implements methods using > > probab

Re: New: biology/hmmer

2016-11-10 Thread Senthil Kumar M
Hi Jeremie, I am sorry for following up so quickly after submitting my first port. Thank you for looking into this. Senthil > On 10 Nov 2016, at 10:42, Jeremie Courreges-Anglas wrote: > > > Hi Senthil. > > Senthil Kumar M writes: > >> Ping. Can anyone commit

Re: New: biology/hmmer

2016-11-09 Thread Senthil Kumar M
Ping. Can anyone commit this please? Senthil On Sun, 6 Nov 2016, Senthil Kumar M wrote: > Hello ports, > > HMMER is used for searching sequence databases for sequence homologs, > and for making sequence alignments. It implements methods using > probabilistic models called

New: biology/hmmer

2016-11-06 Thread Senthil Kumar M
Hello ports, HMMER is used for searching sequence databases for sequence homologs, and for making sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs). (http://hmmer.org) The latest version 3.1b2 compiles and builds without any