On Sat, 12 Nov 2016, Jeremie Courreges-Anglas wrote:
> Senthil Kumar M <senthil.deb...@gmail.com> writes: > > > Hello ports, > > > > HMMER is used for searching sequence databases for sequence homologs, > > and for making sequence alignments. It implements methods using > > probabilistic models called profile hidden Markov models (profile > > HMMs). (http://hmmer.org) > > > > The latest version 3.1b2 compiles and builds without any additional > > patches/errors on OpenBSD, unlike previous versions (see: `h104' > > on: > > https://raw.githubusercontent.com/EddyRivasLab/hmmer/master/documentation/bugs/BUGTRAX > > . > > > > HMMER is an indispensable tool for bioinformatics research and it > > would be neat to have it available on OpenBSD. > > > > I have tested this on amd64, additional tests, comments are welcome. > > Here's a updated tarball with the following changes: > - more spacing in Makefile > - move PKGNAME to hmmer-3.1beta2, per packages-specs(7) > - I added your name to the mail address in MAINTAINER > - "License GPLv3 only": "GPLv3" is enough, else it would be "GPLv3+" > - make V=1 to show build commands > - disable sse(2) except on amd64 > - kill last paragraph in DESCR, trim the third one and merge it with the > first one. Those bits didn't seem particularly relevant for a package > description > > Looks good to me as is. Are the executables in this package useful > alone, or do you use it only for the library? > > Hi Jeremie, Thank you so much for taking time to look into this and your inputs. I checked the updated tarball on amd64 (running Nov. 9 snapshot) and it works (installs and runs) as expected. The executables in this package are useful by themselves. Senthil
