Maybe use r.rsp? https://blog.r-hub.io/2020/06/03/vignettes/ How to include my pre-print / cheatsheet as a PDF vignette?
On April 8, 2021 12:39:20 PM PDT, "Dr. Connie Brett" <con...@aggregate-genius.com> wrote: >Hello, >I have a package (DGEobj) that depends on the Ensembl service to look >up information used to build the vignette. My builds work fine on >Travis, locally and on R-hub. Occasionally I have seen blips with >regard to internet-based resources not being available, and my vignette >depends on a number of internet resources to get example datasets. >However when I submitted my package to CRAN today the failures Windows >and Debian were that the server certificate verification failed ( SSL >certificate problem: unable to get local issuer certificate). >I’m not sure if there is something I can do about this or if this is >considered a "false positive" per the email - it seems like a "wait and >retry" issue. I don’t want to be rude uploading the package again >without a change or erroneously emailing in response to the rejection. >How should this be handled properly now and into the future? It isn’t >feasible to not use Ensembl for this vignette. >Thanks for your insight and feedback! > >Flavor: r-devel-windows-ix86+x86_64 >Check: re-building of vignette outputs, Result: WARNING > Error(s) in re-building vignettes: > --- re-building 'DGEobj_Overview.Rmd' using rmarkdown > > Ensembl site unresponsive, trying asia mirror > Quitting from lines 259-280 (DGEobj_Overview.Rmd) >Error: processing vignette 'DGEobj_Overview.Rmd' failed with >diagnostics: > SSL certificate problem: unable to get local issuer certificate > --- failed re-building 'DGEobj_Overview.Rmd' > > SUMMARY: processing the following file failed: > 'DGEobj_Overview.Rmd' > > Error: Vignette re-building failed. > Execution halted > > >Flavor: r-devel-linux-x86_64-debian-gcc >Check: re-building of vignette outputs, Result: WARNING > Error(s) in re-building vignettes: > --- re-building 'DGEobj_Overview.Rmd' using rmarkdown > > Ensembl site unresponsive, trying asia mirror > Quitting from lines 235-256 (DGEobj_Overview.Rmd) >Error: processing vignette 'DGEobj_Overview.Rmd' failed with >diagnostics: > server certificate verification failed. CAfile: none CRLfile: none > --- failed re-building 'DGEobj_Overview.Rmd' > > SUMMARY: processing the following file failed: > 'DGEobj_Overview.Rmd' > > Error: Vignette re-building failed. > Execution halted > [[alternative HTML version deleted]] > >______________________________________________ >R-package-devel@r-project.org mailing list >https://stat.ethz.ch/mailman/listinfo/r-package-devel -- Sent from my phone. Please excuse my brevity. ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
