commit: edf2691cf2c7787a766dbd1a8b1083448f693a9d
Author: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Tue Aug 31 09:21:53 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Tue Aug 31 09:21:53 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=edf2691c
sci-biology/Scaffolder-evaluation: remove last-rited pack
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>
.../Scaffolder-evaluation-9999.ebuild | 38 ----------------------
sci-biology/Scaffolder-evaluation/metadata.xml | 15 ---------
2 files changed, 53 deletions(-)
diff --git
a/sci-biology/Scaffolder-evaluation/Scaffolder-evaluation-9999.ebuild
b/sci-biology/Scaffolder-evaluation/Scaffolder-evaluation-9999.ebuild
deleted file mode 100644
index 4e291ece2..000000000
--- a/sci-biology/Scaffolder-evaluation/Scaffolder-evaluation-9999.ebuild
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{7,8,9} )
-
-inherit python-r1 perl-functions git-r3
-
-DESCRIPTION="Scripts to run genome assembly scaffolding tools and analyse
output for accuracy"
-HOMEPAGE="https://github.com/martinghunt/Scaffolder-evaluation
-
https://genomebiology.biomedcentral.com/articles/10.1186/gb-2014-15-3-r42";
-EGIT_REPO_URI="https://github.com/martinghunt/Scaffolder-evaluation.git";
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS=""
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-DEPEND="${PYTHON_DEPS}"
-RDEPEND="${DEPEND}
- dev-lang/perl
- dev-lang/R
- media-gfx/graphviz
- sci-biology/mummer
- sci-biology/bowtie
- sci-biology/samtools
- sci-biology/ncbi-tools
- sci-biology/Fastaq[${PYTHON_USEDEP}]
-"
-
-src_install(){
- python_foreach_impl python_doscript Analysis-scripts/*.py
- dobin Analysis-scripts/*.sh
- perl_domodule Wrapper-scripts/*
- dodoc README.md
-}
diff --git a/sci-biology/Scaffolder-evaluation/metadata.xml
b/sci-biology/Scaffolder-evaluation/metadata.xml
deleted file mode 100644
index 337db209e..000000000
--- a/sci-biology/Scaffolder-evaluation/metadata.xml
+++ /dev/null
@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";>
-<pkgmetadata>
- <maintainer type="person">
- <email>[email protected]</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>[email protected]</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id
type="github">martinghunt/Scaffolder-evaluation</remote-id>
- </upstream>
-</pkgmetadata>
