Here is a patch resolving this problem

** Attachment added: "python-biopython_1.44-1ubuntu1.debdiff"
   http://launchpadlibrarian.net/10663843/python-biopython_1.44-1ubuntu1.debdiff

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import Bio.PDB of python-biopython at gutsy
https://bugs.launchpad.net/bugs/156047
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