Didier, the issue is that launching Java causes extra messages to appear
in the terminal. If there's a script expecting certain output it gets
confused.  You can test this just by running "java -version" and seeing
if you get the "Picked up JAVA_TOOL_OPTIONS" message that Dzmitry shows
in comment #15. It is notable that it may not be identical and other jar
files may show up (from memory.)

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https://bugs.launchpad.net/bugs/1441487

Title:
  Running any Java program produces messages in the terminal, while
  rendering many Java applications broken

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