I tried the latest upstream kernel and this bug even shows up there.
Here is the relevant crash info:

[   82.737559] BUG: unable to handle kernel NULL pointer dereference at 
0000000000000028
[   82.737584] IP: [<ffffffffa02cb753>] rt2800pci_init_queues+0x23/0x260 
[rt2800pci]
[   82.737593] PGD 3f7728067 PUD 3f77a6067 PMD 0 
[   82.737600] Oops: 0000 [#1] SMP 
[   82.737605] Modules linked in: rt2800pci(-) rt2800lib rt2x00pci rt2x00mmio 
rt2x00lib mac80211 cfg80211 eeprom_93cx6 crc_ccitt snd_hda_codec_hdmi 
parport_pc ppdev x86_pkg_temp_thermal intel_powerclamp coretemp kvm_intel kvm 
crct10dif_pclmul crc32_pclmul ghash_clmulni_intel aesni_intel aes_x86_64 lrw 
gf128mul glue_helper ablk_helper cryptd joydev arc4 hid_generic rfcomm 
snd_hda_codec_realtek bnep psmouse snd_seq_midi nouveau snd_seq_midi_event 
microcode serio_raw snd_rawmidi btusb snd_hda_intel snd_hda_codec bluetooth 
lpc_ich usbhid snd_hwdep hid snd_seq mxm_wmi snd_pcm ttm drm_kms_helper 
snd_seq_device snd_page_alloc drm snd_timer snd i2c_algo_bit soundcore wmi 
video mei_me mei mac_hid lp parport e1000e firewire_ohci firewire_core ahci ptp 
crc_itu_t libahci pps_core [last unloaded: cfg80211]
[   82.737720] CPU: 0 PID: 1318 Comm: wpa_supplicant Not tainted 
3.12.0-031200rc5-generic #201310131952
[   82.737725] Hardware name:                  /DZ77GA-70K, BIOS 
GAZ7711H.86A.0059.2012.1106.1053 11/06/2012
[   82.737730] task: ffff8803f5c817a0 ti: ffff8803f5d94000 task.ti: 
ffff8803f5d94000
[   82.737735] RIP: 0010:[<ffffffffa02cb753>]  [<ffffffffa02cb753>] 
rt2800pci_init_queues+0x23/0x260 [rt2800pci]
[   82.737742] RSP: 0018:ffff8803f5d95ba8  EFLAGS: 00010292
[   82.737746] RAX: 0000000000000000 RBX: ffff8803f35e57c0 RCX: 0000000000000000
[   82.737750] RDX: ffffc90009d40000 RSI: ffff88041ec0e458 RDI: ffff8803f35e57c0
[   82.737754] RBP: ffff8803f5d95bb8 R08: 000000000000000a R09: 0000000000000000
[   82.737758] R10: 0000000000000496 R11: 0000000000000495 R12: 0000000000000004
[   82.737762] R13: ffff8803f35e57c0 R14: 0000000000000000 R15: 0000000000000001
[   82.737767] FS:  00007f87ba342740(0000) GS:ffff88041ec00000(0000) 
knlGS:0000000000000000
[   82.737771] CS:  0010 DS: 0000 ES: 0000 CR0: 0000000080050033
[   82.737775] CR2: 0000000000000028 CR3: 00000003f5cfa000 CR4: 00000000001407f0
[   82.737779] Stack:
[   82.737782]  ffff8803f35e57c0 ffff8803f35e57c0 ffff8803f5d95be8 
ffffffffa02cba7e
[   82.737790]  ffff8803f5d95be8 ffffffffa021d3b8 0000000000000040 
00000000fffffdf4
[   82.737798]  ffff8803f5d95c18 ffffffffa02cbfc5 ffff8803f35e57c0 
ffff8803f35e57c0
[   82.737806] Call Trace:
[   82.737811]  [<ffffffffa02cba7e>] rt2800pci_enable_radio+0x1e/0xc0 
[rt2800pci]
[   82.737818]  [<ffffffffa021d3b8>] ? rt2x00queue_reset+0x58/0x70 [rt2x00lib]
[   82.737824]  [<ffffffffa02cbfc5>] rt2800pci_set_device_state+0xa5/0x120 
[rt2800pci]
[   82.737831]  [<ffffffffa021b510>] rt2x00lib_enable_radio+0x50/0xe0 
[rt2x00lib]
[   82.737843]  [<ffffffffa021bb5a>] rt2x00lib_start+0x6a/0xc0 [rt2x00lib]
[   82.737849]  [<ffffffff816a1fcf>] ? inetdev_event+0x2f/0x310
[   82.737855]  [<ffffffffa021c855>] rt2x00mac_start+0x25/0x30 [rt2x00lib]
[   82.737870]  [<ffffffffa06ab8f4>] ieee80211_do_open+0x304/0xe60 [mac80211]
[   82.737876]  [<ffffffff8174b28d>] ? notifier_call_chain+0x4d/0x70
[   82.737883]  [<ffffffff81091d56>] ? raw_notifier_call_chain+0x16/0x20
[   82.737893]  [<ffffffffa06ac4c1>] ieee80211_open+0x71/0x80 [mac80211]
[   82.737900]  [<ffffffff816383b7>] __dev_open+0xb7/0x130
[   82.737905]  [<ffffffff81638681>] __dev_change_flags+0xa1/0x180
[   82.737910]  [<ffffffff81638828>] dev_change_flags+0x28/0x70
[   82.737915]  [<ffffffff816a2934>] devinet_ioctl+0x594/0x620
[   82.737921]  [<ffffffff8164a103>] ? dev_ioctl+0x1c3/0x330
[   82.737926]  [<ffffffff816a3285>] inet_ioctl+0x75/0x90
[   82.737931]  [<ffffffff8161ad80>] sock_do_ioctl+0x30/0x70
[   82.737948]  [<ffffffff8161b75d>] sock_ioctl+0x6d/0x2c0
[   82.737953]  [<ffffffff811cef9a>] do_vfs_ioctl+0x7a/0x2e0
[   82.737959]  [<ffffffff811bcd64>] ? vfs_read+0xb4/0x180
[   82.737963]  [<ffffffff811cf291>] SyS_ioctl+0x91/0xb0
[   82.737968]  [<ffffffff811bcfe2>] ? SyS_read+0x52/0xa0
[   82.737974]  [<ffffffff8174fc6d>] system_call_fastpath+0x1a/0x1f
[   82.737977] Code: 0f 1f 84 00 00 00 00 00 0f 1f 44 00 00 55 48 89 e5 53 48 
89 fb 48 83 ec 08 48 8b 87 20 09 00 00 48 8b 97 28 05 00 00 48 8b 40 08 <48> 8b 
40 28 8b 40 08 89 82 30 02 00 00 48 8b 87 20 09 00 00 48 
[   82.738049] RIP  [<ffffffffa02cb753>] rt2800pci_init_queues+0x23/0x260 
[rt2800pci]
[   82.738056]  RSP <ffff8803f5d95ba8>
[   82.738059] CR2: 0000000000000028
[   82.739666] ---[ end trace 6130c5415f18a698 ]---


** Summary changed:

- [RT3090] modprobe -r rt2800pci crash in kernel
+ [RT3090] modprobe -r rt2800pci crash in kernel (kernel-bug-exists-upstream)

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https://bugs.launchpad.net/bugs/1241726

Title:
  [RT3090] modprobe -r rt2800pci crash in kernel (kernel-bug-exists-
  upstream)

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