I changed the schema, but I deleted all the documents and tried a reindex.
I also tried deleting the core and re-adding it.
The autocommit is disabled because hard commits are controlled in the
client-side.
I also tried with a plain solr installation (just unpack solr and copy
the index folder), and in this way it works.
In my production environment, If I create a new core with exactly the
same configuration it doesn't ( I mean, after a couple of POST the error
I sent you appears in the logs and the core is stopped and reloaded).
Any clue?
Thank you for your suggestions
Danilo
On 12/02/19 18:09, Erick Erickson wrote:
bq. I disabled autocommit (both soft and hard), but used to work with a
previous version of the schema.
First, did you _change_ the schema without
1> deleting all the docs in the index
2> reindexing everything
or better, indexing to a new collection and aliasing to it?
If you changed the schema and continued indexing to the
collection _at any time in the past_ you may have
inconsistent merged segments. The only way to fix this
is to re-index, and I strongly recommend to a new
collection.
Second:
do _not_ disable, commits and index for a long time.
1> your tlog will grow forever until you do a hard commit
2> certain internal Solr structures grow until a new searcher
is opened, either soft commit or hard-commit-with-opensearcher-true
https://lucidworks.com/2013/08/23/understanding-transaction-logs-softcommit-and-commit-in-sorlcloud/
Best,
Erick
On Tue, Feb 12, 2019 at 1:03 AM MUNENDRA S.N <sn.munendr...@gmail.com> wrote:
Are you trying to set some field to null in the request?? Also, is that
particular field numeric, doc valued enabled and stored set to false??
Sharing more details would help here, specifically update request and
schema for those fields.
Regards,
Munendra S N
On Tue, Feb 12, 2019 at 2:24 PM Danilo Tomasoni <tomas...@cosbi.eu> wrote:
Hello all,
I get this error while uploading my documents with 'set' modifier in
json format.
My solr version is 7.3.1.
I disabled autocommit (both soft and hard), but used to work with a
previous version of the schema.
Someone have any clue on what's going on here?
I can't reproduce the issue indexing locally on another solr 7.3.1
instance, I get this error only in the production instance.
Thank you
Danilo
======== This is the error I get from client ========
{
"responseHeader":{
"status":500,
"QTime":33},
"error":{
"trace":"
java.lang.NullPointerException
at org.apache.solr.update.UpdateLog.lookup(UpdateLog.java:971)
at
org.apache.solr.handler.component.RealTimeGetComponent.getInputDocumentFromTlog(RealTimeGetComponent.java:537)
at
org.apache.solr.handler.component.RealTimeGetComponent.getInputDocument(RealTimeGetComponent.java:617)
at
org.apache.solr.handler.component.RealTimeGetComponent.getInputDocument(RealTimeGetComponent.java:594)
at
org.apache.solr.update.processor.DistributedUpdateProcessor.getUpdatedDocument(DistributedUpdateProcessor.java:1330)
at
org.apache.solr.update.processor.DistributedUpdateProcessor.versionAdd(DistributedUpdateProcessor.java:1049)
at
org.apache.solr.update.processor.DistributedUpdateProcessor.processAdd(DistributedUpdateProcessor.java:633)
at
org.apache.solr.update.processor.LogUpdateProcessorFactory$LogUpdateProcessor.processAdd(LogUpdateProcessorFactory.java:103)
at
org.apache.solr.update.processor.UpdateRequestProcessor.processAdd(UpdateRequestProcessor.java:55)
at
org.apache.solr.update.processor.FieldMutatingUpdateProcessor.processAdd(FieldMutatingUpdateProcessor.java:118)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.handleAdds(JsonLoader.java:501)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.processUpdate(JsonLoader.java:145)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.load(JsonLoader.java:121)
at org.apache.solr.handler.loader.JsonLoader.load(JsonLoader.java:84)
at
org.apache.solr.handler.UpdateRequestHandler$1.load(UpdateRequestHandler.java:97)
at
org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentStreamHandlerBase.java:68)
at
org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase.java:195)
at org.apache.solr.core.SolrCore.execute(SolrCore.java:2503)
at org.apache.solr.servlet.HttpSolrCall.execute(HttpSolrCall.java:711)
at org.apache.solr.servlet.HttpSolrCall.call(HttpSolrCall.java:517)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:384)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:330)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1629)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:190)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:188)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1253)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:168)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:166)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1155)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:219)
at
org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.java:335)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:530)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:347)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:256)
at
org.eclipse.jetty.io
.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)
at
org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:124)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:247)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYouKill.java:140)
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:708)
at
org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:626)
at java.lang.Thread.run(Thread.java:748)
"
}
======= this is the error I see in solr.log ===============
2019-02-12 08:43:01.592 INFO (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.u.p.LogUpdateProcessorFactory [COSBIBioIndex] webapp=/solr
path=/update/json params={}{add=[PUBMEDPMID24951927
(1625251880396390400), PUBMEDPMID19328818 (1625251880437284864),
PUBMEDPMID24304416 (1625251880442527744), PUBMEDPMID24398789
(1625251880446722048), PUBMEDPMID23111281 (1625251880455110656),
PUBMEDPMID26933085 (1625251880464547840), PUBMEDPMID18635358
(1625251880471887872), PUBMEDPMID26856594 (1625251880472936448),
PUBMEDPMID21803289 (1625251880479227904), PUBMEDPMID25722448
(1625251880487616512), ... (194 adds)]} 0 5567
2019-02-12 08:43:01.594 ERROR (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.h.RequestHandlerBase org.eclipse.jetty.io.EofException: Early EOF
at org.eclipse.jetty.server.HttpInput$3.getError(HttpInput.java:1126)
at org.eclipse.jetty.server.HttpInput$3.noContent(HttpInput.java:1115)
at org.eclipse.jetty.server.HttpInput.read(HttpInput.java:309)
at
org.apache.commons.io.input.ProxyInputStream.read(ProxyInputStream.java:100)
at sun.nio.cs.StreamDecoder.readBytes(StreamDecoder.java:284)
at sun.nio.cs.StreamDecoder.implRead(StreamDecoder.java:326)
at sun.nio.cs.StreamDecoder.read(StreamDecoder.java:178)
at java.io.InputStreamReader.read(InputStreamReader.java:184)
at org.noggit.JSONParser.fill(JSONParser.java:208)
at org.noggit.JSONParser.getMore(JSONParser.java:215)
at org.noggit.JSONParser.readStringChars2(JSONParser.java:709)
at org.noggit.JSONParser.readStringChars(JSONParser.java:689)
at org.noggit.JSONParser.getStringChars(JSONParser.java:1154)
at org.noggit.JSONParser.getString(JSONParser.java:1142)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseSingleFieldValue(JsonLoader.java:637)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseArrayFieldValue(JsonLoader.java:667)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseNormalFieldValue(JsonLoader.java:625)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseExtendedFieldValue(JsonLoader.java:599)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseFieldValue(JsonLoader.java:557)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseDoc(JsonLoader.java:543)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.handleAdds(JsonLoader.java:500)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.processUpdate(JsonLoader.java:145)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.load(JsonLoader.java:121)
at org.apache.solr.handler.loader.JsonLoader.load(JsonLoader.java:84)
at
org.apache.solr.handler.UpdateRequestHandler$1.load(UpdateRequestHandler.java:97)
at
org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentStreamHandlerBase.java:68)
at
org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase.java:195)
at org.apache.solr.core.SolrCore.execute(SolrCore.java:2503)
at org.apache.solr.servlet.HttpSolrCall.execute(HttpSolrCall.java:711)
at org.apache.solr.servlet.HttpSolrCall.call(HttpSolrCall.java:517)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:384)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:330)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1629)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:190)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:188)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1253)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:168)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:166)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1155)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:219)
at
org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.java:335)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:530)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:347)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:256)
at
org.eclipse.jetty.io
.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)
at org.eclipse.jetty.io
.ChannelEndPoint$2.run(ChannelEndPoint.java:124)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:247)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYouKill.java:140)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:131)
at
org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:382)
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:708)
at
org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:626)
at java.lang.Thread.run(Thread.java:748)
2019-02-12 08:43:01.599 ERROR (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.s.HttpSolrCall null:org.eclipse.jetty.io.EofException: Early EOF
at org.eclipse.jetty.server.HttpInput$3.getError(HttpInput.java:1126)
at org.eclipse.jetty.server.HttpInput$3.noContent(HttpInput.java:1115)
at org.eclipse.jetty.server.HttpInput.read(HttpInput.java:309)
at
org.apache.commons.io.input.ProxyInputStream.read(ProxyInputStream.java:100)
at sun.nio.cs.StreamDecoder.readBytes(StreamDecoder.java:284)
at sun.nio.cs.StreamDecoder.implRead(StreamDecoder.java:326)
at sun.nio.cs.StreamDecoder.read(StreamDecoder.java:178)
at java.io.InputStreamReader.read(InputStreamReader.java:184)
at org.noggit.JSONParser.fill(JSONParser.java:208)
at org.noggit.JSONParser.getMore(JSONParser.java:215)
at org.noggit.JSONParser.readStringChars2(JSONParser.java:709)
at org.noggit.JSONParser.readStringChars(JSONParser.java:689)
at org.noggit.JSONParser.getStringChars(JSONParser.java:1154)
at org.noggit.JSONParser.getString(JSONParser.java:1142)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseSingleFieldValue(JsonLoader.java:637)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseArrayFieldValue(JsonLoader.java:667)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseNormalFieldValue(JsonLoader.java:625)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseExtendedFieldValue(JsonLoader.java:599)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseFieldValue(JsonLoader.java:557)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseDoc(JsonLoader.java:543)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.handleAdds(JsonLoader.java:500)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.processUpdate(JsonLoader.java:145)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.load(JsonLoader.java:121)
at org.apache.solr.handler.loader.JsonLoader.load(JsonLoader.java:84)
at
org.apache.solr.handler.UpdateRequestHandler$1.load(UpdateRequestHandler.java:97)
at
org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentStreamHandlerBase.java:68)
at
org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase.java:195)
at org.apache.solr.core.SolrCore.execute(SolrCore.java:2503)
at org.apache.solr.servlet.HttpSolrCall.execute(HttpSolrCall.java:711)
at org.apache.solr.servlet.HttpSolrCall.call(HttpSolrCall.java:517)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:384)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:330)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1629)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:190)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:188)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1253)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:168)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:166)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1155)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:219)
at
org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.java:335)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:530)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:347)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:256)
at
org.eclipse.jetty.io
.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)
at org.eclipse.jetty.io
.ChannelEndPoint$2.run(ChannelEndPoint.java:124)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:247)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYouKill.java:140)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:131)
at
org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:382)
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:708)
at
org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:626)
at java.lang.Thread.run(Thread.java:748)
2019-02-12 08:43:01.599 INFO (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.c.SolrCore [COSBIBioIndex] CLOSING SolrCore
org.apache.solr.core.SolrCore@44e058fb
2019-02-12 08:43:01.600 INFO (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.m.SolrMetricManager Closing metric reporters for
registry=solr.core.COSBIBioIndex, tag=1155553531
2019-02-12 08:43:01.600 INFO (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.u.DirectUpdateHandler2 Committing on IndexWriter close.
2019-02-12 08:43:01.600 INFO (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.u.SolrIndexWriter Calling setCommitData with
IW:org.apache.solr.update.SolrIndexWriter@13750f6d commitCommandVersion:0
2019-02-12 08:43:02.915 ERROR (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.u.DirectUpdateHandler2 Error in final commit
java.lang.NoClassDefFoundError:
org/apache/lucene/index/BufferedUpdatesStream$ApplyDeletesResult
at
org.apache.lucene.index.BufferedUpdatesStream.closeSegmentStates(BufferedUpdatesStream.java:368)
at
org.apache.lucene.index.FrozenBufferedUpdates.finishApply(FrozenBufferedUpdates.java:402)
at
org.apache.lucene.index.FrozenBufferedUpdates.apply(FrozenBufferedUpdates.java:327)
at
org.apache.lucene.index.DocumentsWriter$ResolveUpdatesEvent.process(DocumentsWriter.java:740)
at
org.apache.lucene.index.IndexWriter.processEvents(IndexWriter.java:5106)
at
org.apache.lucene.index.IndexWriter.processEvents(IndexWriter.java:5096)
at
org.apache.lucene.index.IndexWriter.prepareCommitInternal(IndexWriter.java:3258)
at
org.apache.lucene.index.IndexWriter.commitInternal(IndexWriter.java:3458)
at org.apache.lucene.index.IndexWriter.commit(IndexWriter.java:3423)
at
org.apache.solr.update.DirectUpdateHandler2.closeWriter(DirectUpdateHandler2.java:875)
at
org.apache.solr.update.DefaultSolrCoreState.closeIndexWriter(DefaultSolrCoreState.java:105)
at
org.apache.solr.update.DefaultSolrCoreState.close(DefaultSolrCoreState.java:402)
at
org.apache.solr.update.SolrCoreState.decrefSolrCoreState(SolrCoreState.java:83)
at org.apache.solr.core.SolrCore.close(SolrCore.java:1564)
at org.apache.solr.servlet.HttpSolrCall.destroy(HttpSolrCall.java:570)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:402)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:330)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1629)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:190)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:188)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1253)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:168)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:166)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1155)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:219)
at
org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.java:335)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:530)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:347)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:256)
at
org.eclipse.jetty.io
.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)
at org.eclipse.jetty.io
.ChannelEndPoint$2.run(ChannelEndPoint.java:124)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:247)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYouKill.java:140)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:131)
at
org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:382)
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:708)
at
org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:626)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.ClassNotFoundException:
org.apache.lucene.index.BufferedUpdatesStream$ApplyDeletesResult
at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
at
org.eclipse.jetty.webapp.WebAppClassLoader.loadClass(WebAppClassLoader.java:565)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
... 50 more
2019-02-12 08:43:02.920 ERROR (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.c.SolrCore java.lang.NoClassDefFoundError:
org/apache/solr/core/ShutdownAwareDirectory
at
org.apache.solr.core.CachingDirectoryFactory.close(CachingDirectoryFactory.java:298)
at
org.apache.solr.core.CachingDirectoryFactory.closeCacheValue(CachingDirectoryFactory.java:264)
at
org.apache.solr.core.CachingDirectoryFactory.close(CachingDirectoryFactory.java:194)
at org.apache.solr.core.SolrCore.close(SolrCore.java:1633)
at org.apache.solr.servlet.HttpSolrCall.destroy(HttpSolrCall.java:570)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:402)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:330)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1629)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:190)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:188)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1253)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:168)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:166)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1155)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:219)
at
org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.java:335)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:530)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:347)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:256)
at
org.eclipse.jetty.io
.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)
at org.eclipse.jetty.io
.ChannelEndPoint$2.run(ChannelEndPoint.java:124)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:247)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYouKill.java:140)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:131)
at
org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:382)
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:708)
at
org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:626)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.ClassNotFoundException:
org.apache.solr.core.ShutdownAwareDirectory
at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
at
org.eclipse.jetty.webapp.WebAppClassLoader.loadClass(WebAppClassLoader.java:565)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
... 40 more
--
Danilo Tomasoni
COSBI
As for the European General Data Protection Regulation 2016/679 on the
protection of natural persons with regard to the processing of personal
data, we inform you that all the data we possess are object of treatement
in the respect of the normative provided for by the cited GDPR.
It is your right to be informed on which of your data are used and how;
you may ask for their correction, cancellation or you may oppose to their
use by written request sent by recorded delivery to The Microsoft Research
– University of Trento Centre for Computational and Systems Biology Scarl,
Piazza Manifattura 1, 38068 Rovereto (TN), Italy.
--
Danilo Tomasoni
COSBI
As for the European General Data Protection Regulation 2016/679 on the
protection of natural persons with regard to the processing of personal data,
we inform you that all the data we possess are object of treatement in the
respect of the normative provided for by the cited GDPR.
It is your right to be informed on which of your data are used and how; you may
ask for their correction, cancellation or you may oppose to their use by
written request sent by recorded delivery to The Microsoft Research –
University of Trento Centre for Computational and Systems Biology Scarl, Piazza
Manifattura 1, 38068 Rovereto (TN), Italy.
