Hello all,
I get this error while uploading my documents with 'set' modifier in
json format.
My solr version is 7.3.1.
I disabled autocommit (both soft and hard), but used to work with a
previous version of the schema.
Someone have any clue on what's going on here?
I can't reproduce the issue indexing locally on another solr 7.3.1
instance, I get this error only in the production instance.
Thank you
Danilo
======== This is the error I get from client ========
{
"responseHeader":{
"status":500,
"QTime":33},
"error":{
"trace":"
java.lang.NullPointerException
at org.apache.solr.update.UpdateLog.lookup(UpdateLog.java:971)
at
org.apache.solr.handler.component.RealTimeGetComponent.getInputDocumentFromTlog(RealTimeGetComponent.java:537)
at
org.apache.solr.handler.component.RealTimeGetComponent.getInputDocument(RealTimeGetComponent.java:617)
at
org.apache.solr.handler.component.RealTimeGetComponent.getInputDocument(RealTimeGetComponent.java:594)
at
org.apache.solr.update.processor.DistributedUpdateProcessor.getUpdatedDocument(DistributedUpdateProcessor.java:1330)
at
org.apache.solr.update.processor.DistributedUpdateProcessor.versionAdd(DistributedUpdateProcessor.java:1049)
at
org.apache.solr.update.processor.DistributedUpdateProcessor.processAdd(DistributedUpdateProcessor.java:633)
at
org.apache.solr.update.processor.LogUpdateProcessorFactory$LogUpdateProcessor.processAdd(LogUpdateProcessorFactory.java:103)
at
org.apache.solr.update.processor.UpdateRequestProcessor.processAdd(UpdateRequestProcessor.java:55)
at
org.apache.solr.update.processor.FieldMutatingUpdateProcessor.processAdd(FieldMutatingUpdateProcessor.java:118)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.handleAdds(JsonLoader.java:501)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.processUpdate(JsonLoader.java:145)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.load(JsonLoader.java:121)
at org.apache.solr.handler.loader.JsonLoader.load(JsonLoader.java:84)
at
org.apache.solr.handler.UpdateRequestHandler$1.load(UpdateRequestHandler.java:97)
at
org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentStreamHandlerBase.java:68)
at
org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase.java:195)
at org.apache.solr.core.SolrCore.execute(SolrCore.java:2503)
at org.apache.solr.servlet.HttpSolrCall.execute(HttpSolrCall.java:711)
at org.apache.solr.servlet.HttpSolrCall.call(HttpSolrCall.java:517)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:384)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:330)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1629)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:190)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:188)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1253)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:168)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:166)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1155)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:219)
at
org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.java:335)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:530)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:347)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:256)
at
org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)
at
org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:124)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:247)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYouKill.java:140)
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:708)
at
org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:626)
at java.lang.Thread.run(Thread.java:748)
"
}
======= this is the error I see in solr.log ===============
2019-02-12 08:43:01.592 INFO (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.u.p.LogUpdateProcessorFactory [COSBIBioIndex] webapp=/solr
path=/update/json params={}{add=[PUBMEDPMID24951927
(1625251880396390400), PUBMEDPMID19328818 (1625251880437284864),
PUBMEDPMID24304416 (1625251880442527744), PUBMEDPMID24398789
(1625251880446722048), PUBMEDPMID23111281 (1625251880455110656),
PUBMEDPMID26933085 (1625251880464547840), PUBMEDPMID18635358
(1625251880471887872), PUBMEDPMID26856594 (1625251880472936448),
PUBMEDPMID21803289 (1625251880479227904), PUBMEDPMID25722448
(1625251880487616512), ... (194 adds)]} 0 5567
2019-02-12 08:43:01.594 ERROR (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.h.RequestHandlerBase org.eclipse.jetty.io.EofException: Early EOF
at org.eclipse.jetty.server.HttpInput$3.getError(HttpInput.java:1126)
at org.eclipse.jetty.server.HttpInput$3.noContent(HttpInput.java:1115)
at org.eclipse.jetty.server.HttpInput.read(HttpInput.java:309)
at
org.apache.commons.io.input.ProxyInputStream.read(ProxyInputStream.java:100)
at sun.nio.cs.StreamDecoder.readBytes(StreamDecoder.java:284)
at sun.nio.cs.StreamDecoder.implRead(StreamDecoder.java:326)
at sun.nio.cs.StreamDecoder.read(StreamDecoder.java:178)
at java.io.InputStreamReader.read(InputStreamReader.java:184)
at org.noggit.JSONParser.fill(JSONParser.java:208)
at org.noggit.JSONParser.getMore(JSONParser.java:215)
at org.noggit.JSONParser.readStringChars2(JSONParser.java:709)
at org.noggit.JSONParser.readStringChars(JSONParser.java:689)
at org.noggit.JSONParser.getStringChars(JSONParser.java:1154)
at org.noggit.JSONParser.getString(JSONParser.java:1142)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseSingleFieldValue(JsonLoader.java:637)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseArrayFieldValue(JsonLoader.java:667)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseNormalFieldValue(JsonLoader.java:625)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseExtendedFieldValue(JsonLoader.java:599)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseFieldValue(JsonLoader.java:557)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseDoc(JsonLoader.java:543)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.handleAdds(JsonLoader.java:500)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.processUpdate(JsonLoader.java:145)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.load(JsonLoader.java:121)
at org.apache.solr.handler.loader.JsonLoader.load(JsonLoader.java:84)
at
org.apache.solr.handler.UpdateRequestHandler$1.load(UpdateRequestHandler.java:97)
at
org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentStreamHandlerBase.java:68)
at
org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase.java:195)
at org.apache.solr.core.SolrCore.execute(SolrCore.java:2503)
at org.apache.solr.servlet.HttpSolrCall.execute(HttpSolrCall.java:711)
at org.apache.solr.servlet.HttpSolrCall.call(HttpSolrCall.java:517)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:384)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:330)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1629)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:190)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:188)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1253)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:168)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:166)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1155)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:219)
at
org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.java:335)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:530)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:347)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:256)
at
org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)
at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:124)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:247)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYouKill.java:140)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:131)
at
org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:382)
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:708)
at
org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:626)
at java.lang.Thread.run(Thread.java:748)
2019-02-12 08:43:01.599 ERROR (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.s.HttpSolrCall null:org.eclipse.jetty.io.EofException: Early EOF
at org.eclipse.jetty.server.HttpInput$3.getError(HttpInput.java:1126)
at org.eclipse.jetty.server.HttpInput$3.noContent(HttpInput.java:1115)
at org.eclipse.jetty.server.HttpInput.read(HttpInput.java:309)
at
org.apache.commons.io.input.ProxyInputStream.read(ProxyInputStream.java:100)
at sun.nio.cs.StreamDecoder.readBytes(StreamDecoder.java:284)
at sun.nio.cs.StreamDecoder.implRead(StreamDecoder.java:326)
at sun.nio.cs.StreamDecoder.read(StreamDecoder.java:178)
at java.io.InputStreamReader.read(InputStreamReader.java:184)
at org.noggit.JSONParser.fill(JSONParser.java:208)
at org.noggit.JSONParser.getMore(JSONParser.java:215)
at org.noggit.JSONParser.readStringChars2(JSONParser.java:709)
at org.noggit.JSONParser.readStringChars(JSONParser.java:689)
at org.noggit.JSONParser.getStringChars(JSONParser.java:1154)
at org.noggit.JSONParser.getString(JSONParser.java:1142)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseSingleFieldValue(JsonLoader.java:637)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseArrayFieldValue(JsonLoader.java:667)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseNormalFieldValue(JsonLoader.java:625)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseExtendedFieldValue(JsonLoader.java:599)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseFieldValue(JsonLoader.java:557)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.parseDoc(JsonLoader.java:543)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.handleAdds(JsonLoader.java:500)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.processUpdate(JsonLoader.java:145)
at
org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.load(JsonLoader.java:121)
at org.apache.solr.handler.loader.JsonLoader.load(JsonLoader.java:84)
at
org.apache.solr.handler.UpdateRequestHandler$1.load(UpdateRequestHandler.java:97)
at
org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentStreamHandlerBase.java:68)
at
org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase.java:195)
at org.apache.solr.core.SolrCore.execute(SolrCore.java:2503)
at org.apache.solr.servlet.HttpSolrCall.execute(HttpSolrCall.java:711)
at org.apache.solr.servlet.HttpSolrCall.call(HttpSolrCall.java:517)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:384)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:330)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1629)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:190)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:188)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1253)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:168)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:166)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1155)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:219)
at
org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.java:335)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:530)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:347)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:256)
at
org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)
at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:124)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:247)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYouKill.java:140)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:131)
at
org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:382)
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:708)
at
org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:626)
at java.lang.Thread.run(Thread.java:748)
2019-02-12 08:43:01.599 INFO (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.c.SolrCore [COSBIBioIndex] CLOSING SolrCore
org.apache.solr.core.SolrCore@44e058fb
2019-02-12 08:43:01.600 INFO (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.m.SolrMetricManager Closing metric reporters for
registry=solr.core.COSBIBioIndex, tag=1155553531
2019-02-12 08:43:01.600 INFO (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.u.DirectUpdateHandler2 Committing on IndexWriter close.
2019-02-12 08:43:01.600 INFO (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.u.SolrIndexWriter Calling setCommitData with
IW:org.apache.solr.update.SolrIndexWriter@13750f6d commitCommandVersion:0
2019-02-12 08:43:02.915 ERROR (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.u.DirectUpdateHandler2 Error in final commit
java.lang.NoClassDefFoundError:
org/apache/lucene/index/BufferedUpdatesStream$ApplyDeletesResult
at
org.apache.lucene.index.BufferedUpdatesStream.closeSegmentStates(BufferedUpdatesStream.java:368)
at
org.apache.lucene.index.FrozenBufferedUpdates.finishApply(FrozenBufferedUpdates.java:402)
at
org.apache.lucene.index.FrozenBufferedUpdates.apply(FrozenBufferedUpdates.java:327)
at
org.apache.lucene.index.DocumentsWriter$ResolveUpdatesEvent.process(DocumentsWriter.java:740)
at
org.apache.lucene.index.IndexWriter.processEvents(IndexWriter.java:5106)
at
org.apache.lucene.index.IndexWriter.processEvents(IndexWriter.java:5096)
at
org.apache.lucene.index.IndexWriter.prepareCommitInternal(IndexWriter.java:3258)
at
org.apache.lucene.index.IndexWriter.commitInternal(IndexWriter.java:3458)
at org.apache.lucene.index.IndexWriter.commit(IndexWriter.java:3423)
at
org.apache.solr.update.DirectUpdateHandler2.closeWriter(DirectUpdateHandler2.java:875)
at
org.apache.solr.update.DefaultSolrCoreState.closeIndexWriter(DefaultSolrCoreState.java:105)
at
org.apache.solr.update.DefaultSolrCoreState.close(DefaultSolrCoreState.java:402)
at
org.apache.solr.update.SolrCoreState.decrefSolrCoreState(SolrCoreState.java:83)
at org.apache.solr.core.SolrCore.close(SolrCore.java:1564)
at org.apache.solr.servlet.HttpSolrCall.destroy(HttpSolrCall.java:570)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:402)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:330)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1629)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:190)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:188)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1253)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:168)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:166)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1155)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:219)
at
org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.java:335)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:530)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:347)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:256)
at
org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)
at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:124)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:247)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYouKill.java:140)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:131)
at
org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:382)
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:708)
at
org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:626)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.ClassNotFoundException:
org.apache.lucene.index.BufferedUpdatesStream$ApplyDeletesResult
at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
at
org.eclipse.jetty.webapp.WebAppClassLoader.loadClass(WebAppClassLoader.java:565)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
... 50 more
2019-02-12 08:43:02.920 ERROR (qtp2137589296-19) [ x:COSBIBioIndex]
o.a.s.c.SolrCore java.lang.NoClassDefFoundError:
org/apache/solr/core/ShutdownAwareDirectory
at
org.apache.solr.core.CachingDirectoryFactory.close(CachingDirectoryFactory.java:298)
at
org.apache.solr.core.CachingDirectoryFactory.closeCacheValue(CachingDirectoryFactory.java:264)
at
org.apache.solr.core.CachingDirectoryFactory.close(CachingDirectoryFactory.java:194)
at org.apache.solr.core.SolrCore.close(SolrCore.java:1633)
at org.apache.solr.servlet.HttpSolrCall.destroy(HttpSolrCall.java:570)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:402)
at
org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:330)
at
org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1629)
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:190)
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:188)
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1253)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:168)
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:166)
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1155)
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:219)
at
org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:126)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at
org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.java:335)
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:530)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:347)
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:256)
at
org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)
at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:124)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:247)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYouKill.java:140)
at
org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:131)
at
org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:382)
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:708)
at
org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:626)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.ClassNotFoundException:
org.apache.solr.core.ShutdownAwareDirectory
at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
at
org.eclipse.jetty.webapp.WebAppClassLoader.loadClass(WebAppClassLoader.java:565)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
... 40 more
--
Danilo Tomasoni
COSBI
As for the European General Data Protection Regulation 2016/679 on the
protection of natural persons with regard to the processing of personal data,
we inform you that all the data we possess are object of treatement in the
respect of the normative provided for by the cited GDPR.
It is your right to be informed on which of your data are used and how; you may
ask for their correction, cancellation or you may oppose to their use by
written request sent by recorded delivery to The Microsoft Research –
University of Trento Centre for Computational and Systems Biology Scarl, Piazza
Manifattura 1, 38068 Rovereto (TN), Italy.
