Re: [slurm-users] Meaning of "defunct" in description of Slurm parameters

2020-07-20 Thread Kevin Buckley
On 2020/07/20 20:26, Riebs, Andy wrote: Ummm... unless I'm missing something obvious, though the choice of the term "defunct" might not be my choice (I would have expected "deprecated"), it seems quite clear that the new "SlurmctldHost" parameter has subsumed the 4 that you've listed. I wasn't

Re: [slurm-users] slurm & rstudio

2020-07-20 Thread Brian Andrus
Ah, They are assuming you are running the web interface as root. If your environment is secure enough, you can do that. Or, grant your web server user privileges in slurm to be allowed to use the "--uid" option. Brian Andrus On 7/20/2020 8:39 AM, Sidhu, Khushwant wrote: Hi, I have rstudio

Re: [slurm-users] slurm & rstudio

2020-07-20 Thread Brian Andrus
You are trying to use sbatch with the "--uid" option which is only allowed by root. Either run sbatch as the user doing the request (which should be the same user that is running rstudio) or use 'sudo -u ' to run sbatch. Brian Andrus On 7/20/2020 7:50 AM, Sidhu, Khushwant wrote: Hi, I’m t

Re: [slurm-users] slurm & rstudio

2020-07-20 Thread Sidhu, Khushwant
Hi, I have rstudio - works fine I have slurm installed (as node) on same machine - can submit jobs successfuly I want to integrate slurm into rstudio using a module called launcher (there are instructions which I have followed) There is a web interface to rstudio which brings up an interface fro

Re: [slurm-users] slurm & rstudio

2020-07-20 Thread Benjamin Redling
Hi Kush, have you tried searching for (parts of) that error message? Is R Studio Pro aware of the following changes? https://lists.schedmd.com/pipermail/slurm-users/2018-May/001296.html Regards, Benjamin Am 20. Juli 2020 16:50:08 MESZ schrieb "Sidhu, Khushwant" : >Hi, > >I'm trying to use rstu

Re: [slurm-users] slurm & rstudio

2020-07-20 Thread Riebs, Andy
Frankly, it's hard to tell what you might be doing wrong if you don't tell us what you're doing! That notwithstanding, the "--uid" message suggests that something in your process is trying to submit a job with the "--uid" option, but you don't have sufficient privs to use it. Andy From: slurm

[slurm-users] slurm & rstudio

2020-07-20 Thread Sidhu, Khushwant
Hi, I'm trying to use rstudio & slurm to submit jobs but am getting the attached error. Has anyone come across it or know what I'm doing wrong ? Thanks Regards Khush Disclaimer: This email and any attachments are sent in strictest confidence for the sole use of the addressee and may contain

[slurm-users] Slurm gpu vs cpu via partition, fair share and/or sos help

2020-07-20 Thread Jodie H. Sprouse
Good morning. I’m wondering if one could point me in the right direction to fulfill a request on one of our small clusters. Cluster info: * 5 nodes with 4 gpus/28 cpus each node. * User 1 only will submit to cpus, all other 8 users will submit to gpus * only one account in the database with

Re: [slurm-users] Meaning of "defunct" in description of Slurm parameters

2020-07-20 Thread Paul Edmon
My guess if I had to hazard one is that they wanted to simplify how you define who the controller is.  With the previous method you could define it in conflicting ways.  This method is less prone to mistakes. That's at least my read of it. -Paul Edmon- On 7/20/2020 8:26 AM, Riebs, Andy wrote:

Re: [slurm-users] Meaning of "defunct" in description of Slurm parameters

2020-07-20 Thread Riebs, Andy
Ummm... unless I'm missing something obvious, though the choice of the term "defunct" might not be my choice (I would have expected "deprecated"), it seems quite clear that the new "SlurmctldHost" parameter has subsumed the 4 that you've listed. I wasn't privy to the decision to the discussion a

Re: [slurm-users] Meaning of "defunct" in description of Slurm parameters

2020-07-20 Thread Paul Edmon
Presumably it wouldn't or it may pick up from the history files. I don't know for certain. For that reason it is best to change over to the new definition before you upgrade.  We did that prior to going to 20.02 and had no problem. -Paul Edmon- On 7/19/2020 11:49 PM, Kevin Buckley wrote: At