Re: [R] Plotrix Trick

2010-06-28 Thread Lorenzo Isella
Yes, I believe I did something along your lines. See the code snippet at the end of the email which sorts everything out as far as I am concerned. Cheers Lorenzo # library(Cairo) library(plotrix) set.seed(1234) myseq <- abs(

Re: [R] Plotrix Trick

2010-06-24 Thread Hrishi Mittal
Lorenzo, I think your question was already answered by Jan van der Laan - http://r.789695.n4.nabble.com/Plotrix-Trick-tp2265893p2266722.html -- View this message in context: http://r.789695.n4.nabble.com/Plotrix-Trick-tp2267177p2267225.html Sent from the R help mailing list archive at Nabble.c

Re: [R] Plotrix Trick

2010-06-24 Thread David Winsemius
On Jun 24, 2010, at 11:38 AM, Lorenzo Isella wrote: Dear Hrishi, I am almost there, thanks. The only small problem left is to convince also the colorbar to plot the values I want. Consider the small snippet at the end of the email: colors and numbers inside the cells are OK, but the legend show

Re: [R] Plotrix Trick

2010-06-24 Thread Jan van der Laan
Lorenzo, You can also use a custom colorscale using color.scale and the cellcolors option of color2D.matplot: pdf("test_color_scale_logcolor.pdf") oldpar<-par( mar = c(4.5,5, 2, 1) + 0.1, cex.axis=1.4,cex.lab=1.6,cex.main=1.6) cellcolors <- color.scale(log(A),c(0.2,1),c(0.2,0.5),c(0,0)) color2D.

Re: [R] Plotrix Trick

2010-06-24 Thread Hrishi Mittal
Lorenzo, This is a bit ugly but should work. Instead of using plotrix's show.values, use the text() command: for(i in 1:5) { for(j in 1:5) { text(i-0.5,j-0.5,format(A[6-j,i],digits=3),col="white") } } -- View this message in context: http://r.789695.n4.nabble.

Re: [R] Plotrix Trick

2010-06-23 Thread Peter Langfelder
On Wed, Jun 23, 2010 at 10:01 AM, Lorenzo Isella wrote: > Dear All, > I am using the plotrix library to plot some matrices. > I have a problem: some of my data are outliers, hence using a linear > color scale does not work very well (you would see too many cells having > a similar, indistinguishab