Lorenzo, You can also use a custom colorscale using color.scale and the cellcolors option of color2D.matplot:
pdf("test_color_scale_logcolor.pdf") oldpar<-par( mar = c(4.5,5, 2, 1) + 0.1, cex.axis=1.4,cex.lab=1.6,cex.main=1.6) cellcolors <- color.scale(log(A),c(0.2,1),c(0.2,0.5),c(0,0)) color2D.matplot(A,main="Title", cellcolors=cellcolors, xlab = "", ylab="", show.legend=TRUE, show.values=1,vcol="black",vcex=1, axes=FALSE) box() par(oldpar) dev.off() Regards, Jan ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.