In a rather simple regression, I’d like to ask the question, for high trees,
whether it makes a difference (for volume) whether a three is thick.
If my interpretation is correct, for low trees, i.e. for which trees$isHigh
== FALSE, the answer is yes.
The problem is how to "merge" the standard er
Deat R users,
I am looking for a way to get standard errors of marginal effects of
multinomial logit model.
So far I have estimated coeficients of multinomial logit and covariance matrix
of coefficients.
I also managed to obtain marginal effects. However, I can not find a way to
find standard
Hi,
I have the very same problem of this here
http://grokbase.com/t/r/r-help/111d386yn9/r-standard-errors-in-johansen-test,
I replicated all the steps in the Papar:
http://cran.r-project.org/web/packages/vars/vignettes/vars.pdf
untill here:
R> vecm <- ca.jo(Canada[, c("rw",
Dear all,
I am using the zeroinfl() function from the pscl package to develop a
zero-inflated Poisson GLM. I would like to calculate the standard errors of
predicted values. I've tried code posted in a previous discussion on this topic
(https://stat.ethz.ch/pipermail/r-help/2008-December/182806
roject.org] En
nombre de D_Tomas
Enviado el: martes, 13 de marzo de 2012 14:39
Para: r-help@r-project.org
Asunto: [R] Standard errors GLM
Dear userRs,
when applied the summary function to a glm fit (e.g Poisson) the parameter
table provides the categorical variables assuming that the first leve
On Mar 13, 2012, at 9:38 AM, D_Tomas wrote:
Dear userRs,
when applied the summary function to a glm fit (e.g Poisson) the
parameter
table provides the categorical variables assuming that the first level
estimate (in alphabetical order) is 0.
Not really. It returns an estimate for the cont
Hi,
See inline.
On Tue, Mar 13, 2012 at 6:38 AM, D_Tomas wrote:
> Dear userRs,
>
> when applied the summary function to a glm fit (e.g Poisson) the parameter
> table provides the categorical variables assuming that the first level
> estimate (in alphabetical order) is 0.
>
> What is the standard
Dear userRs,
when applied the summary function to a glm fit (e.g Poisson) the parameter
table provides the categorical variables assuming that the first level
estimate (in alphabetical order) is 0.
What is the standard error for that variable then?
Are the standard errors calculated assuming
Mike,
Isn't this just an example of the wrong model giving a spurious
impression of precision? or more accurately, precision at the expense of
accuracy?
Here's a linear model example of the same thing...
set.seed(1)
n <- 400
x <- runif(n)-.5
y <- 2+ x*.2+ x^2 + rnorm(n)*.5
m1 <- lm(y~1)
m2 <- l
I've got a small problem.
I have some observational data (environmental samples: abiotic explanatory
variable and biological response) to which I've fitted both a multiple linear
regression model and also a gam (mgcv) using smooths for each term. The gam
clearly fits far better than the lm mod
Hello!
I am working on a manuscript on sexual dimorphism in an aquatic
invertebrate, where we have estimated sexual dimorphism (SD) for 7 different
traits in four populations (a total of 28 SD-estimates). We have used the
following formula for estimating SD: 100 * (mean male trait value - mean
fem
Hi Walter,
The paper can be found at
http://cran.r-project.org/web/packages/vars/vignettes/vars.pdf It seems
that you need the "vars" library before trying the function you mention.
What happens if you do the following?
install.packages("vars")
require(vars)
?cajorls
?ca.jo
HTH,
Jorge
On Wed
Dear all,
I have a question. How to get the standard errors of alpha and beta
when using "ca.jo" to test cointergration?
In the paper by Bernhard Pfaff and Kronberg im Taunus âVAR, SVAR and SVEC
Models: Implementation Within R Packageâ pp.24-25. The standard errors are
listed on the table
hi,
i did a binomial glmer for a repeated measure design. now i wanted to use
some indicator of variance for the fixed eff. of the model for the graphical
representations. sd's of the plain incident rates are huge and misleading in
that context. thus i thought of extracting se's of the coefficien
On Jan 8, 2010, at 6:45 AM, jjh wrote:
Hello-
Is it possible to estimate standard errors for a multiple regression
model
using a randomization test approach? I have seen a lot on using the
procedure to get a test statistic, but nothing that talks about
getting
actual standard errors. Is
Standard errors for the coefficients. Thanks!
Tal Galili wrote:
>
> Hi jjh,
> I wasn't able to understand: for what statistic do you want the standard
> error for? (The coefficients, the R^2 ?)
>
> Tal
>
>
> Contact
> Details:--
Hi jjh,
I wasn't able to understand: for what statistic do you want the standard
error for? (The coefficients, the R^2 ?)
Tal
Contact
Details:---
Contact me: tal.gal...@gmail.com | 972-52-7275845
Read me: www.talgalili.com (Heb
Hello-
Is it possible to estimate standard errors for a multiple regression model
using a randomization test approach? I have seen a lot on using the
procedure to get a test statistic, but nothing that talks about getting
actual standard errors. Is this possible? How might I do this in R?
Thank
Peter Dalgaard wrote:
>
> alexander russell wrote:
>> Hello,
>> Mle2 is a little unforthcoming in the matter of standard errors? Is there
>> a
>> way to ask the program to supply standard errors along with estimates in
>> cases when it doesn't print them 'voluntarily'?
>> regards,
>> s
>
> Wha
alexander russell wrote:
> Hello,
> Mle2 is a little unforthcoming in the matter of standard errors? Is there a
> way to ask the program to supply standard errors along with estimates in
> cases when it doesn't print them 'voluntarily'?
> regards,
> s
What did you do? Which "cases"? Did you look a
Hello,
Mle2 is a little unforthcoming in the matter of standard errors? Is there a
way to ask the program to supply standard errors along with estimates in
cases when it doesn't print them 'voluntarily'?
regards,
s
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_
Hello.
I estimated a VAR(1) TSmodel (var_1) with estMaxLik from the dse1 package given
a TSdata object (mydata).
est.model <- estMaxLik(var_1,mydata)
How can I obtain the standard errors for the four coefficients of the estimated
model to check for significance? - Is it yet calculated and I ca
age-
> From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org]
On
> Behalf Of Bruno Estigarribia
> Sent: January-22-09 12:32 AM
> To: r-help@r-project.org
> Subject: [R] Standard errors of least squares adjusted means
>
> Hello,
>
> I have the following model
Hi Bruno,
Apropos of "ls-means" ...
>> I have tried help.search and RSiteSearch with several terms including
>> "standard errors", "least square means", "adjusted means".
And "ls-means," which is what "you" call them?
There are many threads on this, spanning many years. The following,
RSiteSe
Hello,
I have the following model:
lm.7 <- lm(Y ~ F + C1 + C2 , data = EM4)
F is a 4-level factor, the rest are covariates centered at their mean (Y
is a two-column matrix).
I have tried to find functions to give the model-adjusted means
(adjusted at the covariates'means) and their standard dev
nts(st$conc,predict(puro1),pch=2,col="red")
> #
> isn't that what we want graphically and t(qq) gives us the values
> obviously quantile can be used with any set of p's
> [EMAIL PROTECTED]
>
>
> -Original Message-
> From: [EMAIL PROTECTED] on behalf of Ben
nd t(qq) gives us the values
obviously quantile can be used with any set of p's
[EMAIL PROTECTED]
-Original Message-
From: [EMAIL PROTECTED] on behalf of Ben Bolker
Sent: Tue 11/11/2008 3:09 PM
To: [EMAIL PROTECTED]
Cc: r-help@r-project.org
Subject: Re: [R] standard errors for predict.nls
Here's how far I've gotten. It's a start, but
I can't so far find a way to extract the actual
thing we want -- the bootstrap confidence intervals
on the predictions.
I apologize for not taking the time to go
read up on the boot library etc. etc. (I *have*
RTFM, but I haven't backtracked to th
On 7/11/2008, at 11:33 PM, Christoph Scherber wrote:
Dear all,
I would like to get standard errors (or confidence intervals) for
*predicted* values from an nls fit.
I have tried to implement code from p.225 in MASS (bootstrapping a
nls fit), but this gives only the
confidence intervals o
Dear all,
I would like to get standard errors (or confidence intervals) for *predicted*
values from an nls fit.
I have tried to implement code from p.225 in MASS (bootstrapping a nls fit), but this gives only the
confidence intervals of the parameter estimates, but not an overall confidence in
Dear Prof Ripley,
Am I correct if I use the following code to get c.i.´s for predicted values of
the nls fit:
puro1<-nls(rate~a*conc/(b+conc), data=Puromycin[1:12,], start=list(a=200, b=1))
#set up nls model
# assume only one predicted value is obtained using
predict(puro1,list(conc=0.02)):
On Mon, 3 Nov 2008, Ben Bolker wrote:
Prof Brian Ripley wrote:
Christoph Scherber agr.uni-goettingen.de>
writes:
Dear all,
Is there a way to retrieve standard errors from nls models?
The help page tells me that arguments
such as se.fit are ignored...
Many thanks and best wishes
Christoph
Prof Brian Ripley wrote:
>> Christoph Scherber agr.uni-goettingen.de>
>> writes:
>>
>>>
>>> Dear all,
>>>
>>> Is there a way to retrieve standard errors from nls models?
>>> The help page tells me that arguments
>>> such as se.fit are ignored...
>>>
>>> Many thanks and best wishes
>>> Christoph
>
On Mon, 3 Nov 2008, Ben Bolker wrote:
Christoph Scherber agr.uni-goettingen.de> writes:
Dear all,
Is there a way to retrieve standard errors from nls models?
The help page tells me that arguments
such as se.fit are ignored...
Many thanks and best wishes
Christoph
I have written some rea
Dear Christoph,
using the package 'alr3' it's not difficult!
Have a look at the following example:
## Fitting a Michaelis-Menten model
Puromycin.m1<-nls(rate~a*conc/(b+conc), data=Puromycin[1:12,],
start=list(a=200, b=1))
library(alr3)
## Predictions (with standard errors) at concentrations 0
Christoph Scherber agr.uni-goettingen.de> writes:
>
> Dear all,
>
> Is there a way to retrieve standard errors from nls models?
> The help page tells me that arguments
> such as se.fit are ignored...
>
> Many thanks and best wishes
> Christoph
I have written some reasonably generic
delta-
Dear all,
Is there a way to retrieve standard errors from nls models? The help page tells me that arguments
such as se.fit are ignored...
Many thanks and best wishes
Christoph
--
Dr. rer.nat. Christoph Scherber
University of Goettingen
DNPW, Agroecology
Waldweg 26
D-37073 Goettingen
Germa
Subject: [R] standard errors
Hi, guess my problem has simple solution.
I want to extract ONLY Std. Errors of Max. Lik. estimates
(my_fit<-mle(object,...)), the same as I can do with estimates by:
x<-as. matrix(coef(my_fit)).
I could not find any function similar to 'coef(my_fit)', whi
threshold wrote:
> Hi, guess my problem has simple solution.
> I want to extract ONLY Std. Errors of Max. Lik. estimates
> (my_fit<-mle(object,...)), the same as I can do with estimates by:
> x<-as. matrix(coef(my_fit)).
> I could not find any function similar to 'coef(my_fit)', which extracts onl
Try this:
coef(summary(fit))[,2]
On 28/02/2008, threshold <[EMAIL PROTECTED]> wrote:
>
> Hi, guess my problem has simple solution.
> I want to extract ONLY Std. Errors of Max. Lik. estimates
> (my_fit<-mle(object,...)), the same as I can do with estimates by:
> x<-as. matrix(coef(my_fit)).
>
On Thu, 28 Feb 2008, threshold wrote:
> Hi, guess my problem has simple solution.
> I want to extract ONLY Std. Errors of Max. Lik. estimates
> (my_fit<-mle(object,...)), the same as I can do with estimates by:
> x<-as. matrix(coef(my_fit)).
> I could not find any function similar to 'coef(my_fit)
Hi, guess my problem has simple solution.
I want to extract ONLY Std. Errors of Max. Lik. estimates
(my_fit<-mle(object,...)), the same as I can do with estimates by:
x<-as. matrix(coef(my_fit)).
I could not find any function similar to 'coef(my_fit)', which extracts only
Standard Errors. So far
Dear All
Is there a way to extract the standard errors of sample autocorrelations after
using acf function to estimate the autocorrelations.
If yes, what method is the calculation of standard errors based on?
Thanks in advance for your time and help.
Strong
___
stderr_int <- summary(lm(y ~ x))$coefficients[1,2]
stderr_slope <- summary(lm(y ~ x))$coefficients[2,2]
Jeff.
On Oct 3, 2007, at 3:01 AM, Alexander Moreno wrote:
> Hi,
>
> If I have two vectors x and y and I do lm(y~x) and now I want to
> define
> variables that are the standard errors of the
Hi,
If I have two vectors x and y and I do lm(y~x) and now I want to define
variables that are the standard errors of the slope and intercept, how do I
do that?
Thanks,
Alex
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