I followed the procedure indicated in https://cran.mirror.garr.it/CRAN/
step by step to� install R under ubuntu 21.04 hirsute but� the apt-key
command failed:
vr@ubuntu:~$ apt-key adv --keyserver keyserver.ubuntu.com --recv-keys
E298A3A825C0D65DFD57CBB651716619E084DAB9
Warning: apt-key is depre
Dear all,
I am using package MCMCglmm and I would like to request for an
assistant on what
to look in the output which can tell me whether there is
significant association among the three antibody
titers(logiga,logigm,logigg) for example association between antibody
titers and exposure I ca
A new package, nVennR, is available on CRAN
Description: Provides an interface for the nVenn algorithm (Perez-Silva et
al. 2018) to create approximately
proportional, n-dimensional Venn and Euler diagrams. There is no limit to
the number of sets, although using more than seven takes a long tim
'sourced' in.
>
>
> Jim Holtman
> Data Munger Guru
>
> What is the problem that you are trying to solve?
> Tell me what you want to do, not how you want to do it.
>
> On Thu, Oct 29, 2015 at 2:13 PM, Victor Tian wrote:
>
>> Thanks, Marc and Jeff, for
from my phone. Please excuse my brevity.
>
> On October 29, 2015 8:16:17 AM MST, Victor Tian
> wrote:
> >Hi there,
> >
> >Often times, I would run R in the terminal when the task is
> >computationally
> >intensive and a nice-looking UI is less desired.
> >
Hi there,
Often times, I would run R in the terminal when the task is computationally
intensive and a nice-looking UI is less desired.
However, pasting a large chunk of code into the terminal often times ends
up being messed up. In Python, the same problem would happen, however,
iPython provides
Hi Ravi,
Thanks for this interesting question. My thoughts are given below.
If you believe the rounding is indeed uniformly distributed, then the
problem is equivalent with adding a uniform random error between (-0.5,
0.5) for every observation in addition to the standard normal error, which
will
The R-CRAN project under FreeBSD 10.2 ports is quite obsolete being blocked at
version 3.0.2 while at the moment the project is at version 3.2.2.
Modifying the /usr/ports/math/R port I'm trying to upgrade R to that last
version. When I issue the 'make' command I get the following error
All,
Assume we have data in an ASCII file that looks like
Var1$Var2$Var3$Var4
1$2$3$4
2$$5
$$$6
When I execute
read.table( 'test.dat', header=TRUE, sep='$' )
I, of course, receive the following error:
Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings,
:
line 2 did n
any one ever used this book "Understanding and Applying Research Design?"
or has an e-copy?
[[alternative HTML version deleted]]
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PL
Hi all.
I am having problems with inheritance in reference class, here is a small
example:
Myclass = setRefClass("Myclass",
fields = list(
fa = "numeric",
fb = "numeric",
filename = "character"
I have the following (monthly) ts time-series:
> t
Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec
2002 5.3 9.4 12.1 14.4 17.9 23.5 24.3 23.6 19.3 16.3 13.9 9.0
2003 7.5 5.4 10.4 13.3 19.9 25.6 26.2 27.6 20.6 15.5 12.5 8.0
2004 6.3 7.8 9.6 13.6 16.5 22.0 24.3 24.6 21.3 18.
, 0.6).
I really appreciate your help!
Thanks!
Best
Victor
Here is the initial reply and code provided by Dr. Simon Wood:
"Actually, you might as well use "gam" directly for this (has the
advantage that the smoothing parameter
Context: Mac OS X 10.7 - R 3.0.2 GUI 1.62 Snow Leopard build (6558)
I had been using x12 for some time with no problem at all. every month I update
the time series ricpesata (see below) and run the simple procedure below. Now
adding the data of the last month, Sep.2013,
x12 is complaining:
> l
Dear list,
I am trying to compile R on a 64-bit Ubuntu 13.04 machine and get the
following error:
make[2]: Entering directory
`/home/kaiyin/opt/R-2.15.0/src/library/Recommended'
begin installing recommended package MASS
Error in untar2(tarfile, files, list, exdir) : incomplete block on file
make[
s
"32015tmx".
Any suggestions? Thanks a lot in advance
Dr Victor M Rodríguez M
Doctor en Ciencias, en Ciencias de la Tierra / Geociencias Ambiental
eadLines ("
> for(ifile in listatmn)
> FindU(paste("./",ifile,sep=""),paste("salidas/",ifile,sep=""),"-999.9")
> Error: objeto 'ifnames' no encontrado
What I'd like to do is to make easier and fast running the RHtest
Dear list,
According to this presentation (
http://www.rinfinance.com/agenda/2010/MarkSeligman_Tutorial.pdf), gpuHclust
in the gputools package should be about 20x faster than clust, but after
some testing, I find it actually 4x slower. Here is the code:
test.data <- function(dim, num, seed=17) {
Hi, dear list.
I found that hclust causes segfault in R 3.0.1, here is the code after
starting R --vanilla:
test.data <- function(dim, num, seed=17) {
set.seed(seed)
matrix(rnorm(dim * num), nrow=num)
}
m <- test.data(120, 45)
library(rpud) # load rpud with rpudplus
d <-
i, envir))
1: source("testing.R")
The sequential run was ok.
Best regards,
Kaiyin ZHONG
--
FMB, Erasmus MC
k.zh...@erasmusmc.nl
kindlych...@gmail.com
On Mon, Apr 29, 2013 at 8:26 PM, Duncan Murdoch wrote:
> On 29/04/2013 2:16 PM, Kaiyin Zhong (Victor Chung
Oh, indeed, that IS the problem. Thank you!!!
Best regards,
Kaiyin ZHONG
--
FMB, Erasmus MC
k.zh...@erasmusmc.nl
kindlych...@gmail.com
On Mon, Apr 29, 2013 at 8:22 PM, David Winsemius wrote:
>
> On Apr 29, 2013, at 11:16 AM, Kaiyin Zhong (Victor Chung)
ror in checkForRemoteErrors(val) :
12 nodes produced errors; first error: could not find function "predR"
Best regards,
Kaiyin ZHONG
--
FMB, Erasmus MC
k.zh...@erasmusmc.nl
kindlych...@gmail.com
On Tue, Apr 23, 2013 at 3:44 PM, Uwe Ligges wrote:
>
Thanks for the reply.
How can i make the functions known to all nodes?
Best regards,
Kaiyin ZHONG
--
FMB, Erasmus MC
k.zh...@erasmusmc.nl
kindlych...@gmail.com
On Tue, Apr 23, 2013 at 2:43 PM, Uwe Ligges wrote:
>
>
> On 18.04.2013 11:11, Kaiyin Zhon
re = system('nproc')
> 16
> > ncore
> [1] 0
> # the result is printed, not returned
>
>
> Best wishes,
> Jon
>
>
> On 18-Apr-13 10:52, Kaiyin Zhong (Victor Chung) wrote:
>
>> Dear all,
>>
>> I found a strange thing with the sn
tried on a redhat linux (R 2.15.0) server:
>>
>> > ncore = system('nproc')
>> 16
>> > ncore
>> [1] 0
>> # the result is printed, not returned
>>
>>
>> Best wishes,
>> Jon
>>
>> On 18-Apr-13 10:52, Kaiyin Zhon
Here is the code, assuming 8 cores in the cpu.
library('modeest')
library('snow')
cl = makeCluster(rep('localhost', 8), 'SOCK')
x = vector(length=50)
x = sapply(x, function(i) i=sample(c(1,0), 1))
pastK = function(n, x, k) {
if (n>k) { return(x[(n-k):(n-1)]) }
else {return(NA)}
}
predR
Dear all,
I found a strange thing with the snow package.
This will work:
y = matrix(1:4, 2)
cl = makeCluster(rep('localhost', 8), type='SOCK')
parMM(cl, y, y)
This will not:
y = matrix(1:4, 2)
ncore = system('nproc')
parMM(cl, y, y)
Error in cut.default(i, breaks) : invalid number of intervals
$A;G$bin<-F$b;G$S<-sm$S;G$off<-0
p<-pcls(G); # fit spline (using s.p. from unconstrained fit)
fv<-Predict.matrix(sm,data.frame(x=x))%*%p
lines(x,fv,col=2)
lines(x,f,col="blue")
Thanks a lot!!
Victor
[[alternative HTML version deleted]]
___
.08 0.10 0.12 0.14 0.16 0.18
[61] 0.20
>
Why does "x[x<=0.02]" return no 0.02 but "x[x<0.2]" return a subsample
with 0.02?
Anyone who can tell me why?
Thanks!
Victor
[[alternative HTML version deleted]]
__
increasing, decreasing). However, this package is using B-spline
and can only do linear and quadratic B-spline.
In my research, I need to force a cubic smoothing spline to pass a
point.
Thanks!
Victor
[[alternative HTML versi
I have a Mac OS X system. To deal with a long monthly electricity demand
time-series I use the procedures TRAMO/SEATS with the MS-windows only Demetra
programme and X12 under R resorting to the awkward - as far as the output is
concerned - x12 R package running the relating Fortran code.
I won
I would like to make a string executable, e.g,
s<- "ln(a+b)"
a<-1
b<-2
execute string s to obtain ln(a+b)
How can I make it?
Ciao fron Rome
Vittorio
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PLEASE do
Giornaliero(.)+","",testo[k[30]])
rif<-gsub("^(.)+href=\"","",rif)
pag<-paste("http://www.terna.it",rif,sep="";)
pagina<-readLines(pag)
……….
……….
……….
Il giorno 18/set/2011,
ontrollers) .OO#. .OO#. rocks...1k
> ---
> Sent from my phone. Please excuse my brevity.
>
> Victor wrote:
> In an R script I need to extract some figures from many web pages in pdf
> format. As an example see
> http://www.terna.it/LinkClick.aspx
In an R script I need to extract some figures from many web pages in pdf
format. As an example see
http://www.terna.it/LinkClick.aspx?fileticket=TTQuOPUf%2fs0%3d&tabid=435&mid=3072
from which I would like to extract the "Totale: 1,025,823").
Is there any solution?
Ciao
Vittorio
__
mmand: /
> data.loci <- read.loci(file
="/Users/victor/Documents/SIV_Compartment/data/pegas_data_seq.txt",
header = TRUE,
col.loci = seq(1,200),
col.pop = TRUE)
/seems to work./
/in fact:/
> data.loci
Allelic data frame: 68563 individuals
Hi Ista,
Thank you so much for your explanation!!
I know now how to handle this scale_color_manual() function.
Le 28/05/2011 19:56, Ista Zahn a écrit :
Hi Victor,
The problem is that you have not grasped the difference between
setting an aesthetic to a fixed value and mapping it to a variable
ne.
I guessing i am duing it wrong but i'm stucked with it.
Do you have suggestions?
An additional question is that i want to add text along the blue line (which is
a reference) but i did not understand what geom_text was expecting.
Thanks for your help!
Victor
[[alternat
Thanks for the help!
In the end, i chose to use ggplot which creates really simply different
panels.
And I am replacing my bars by simple points in the end.
Victor
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temporal intervals between samples.
Hence I would like to use a continuous time AR(1) that allow irregular time
intervals between samples.
Unfortunalty I don't find this function in any R package.
Doesn't someone know if this function has already be implemented for R?
Many thanks in advan
that we don't
want to display the same number of parameters for each algorithm.
Thanks for your help.
Victor
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PLEASE do read the posting guide http://www.R-project.o
data=data, method = "class",
control=control)
summary(x)
Similar code run on "noproblem.csv" will not produce the error.
Any suggestions on how to proceed to debug this issue would be greatly
appreciated. I am a novice R user, but not a novice programmer (SAS, some C,
J
goes out of the border as the
borders were not designed for the case of a big title.
Thanks again!!
Victor
Le 29/04/2011 10:03, Jannis a écrit :
On 04/29/2011 05:21 AM, Victor Gabillon wrote:
Horizo <- c(1,2,6,10,20)
legtext <- paste(Horizo,sep="")
legend("topleft&quo
)
saying title.cex argument as been ignored.
Thank you for helping.
Victor
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
I have the following xts objetct "temp"
> str(temp)
An ‘xts’ object from 2010-12-26 to 2011-03-05 containing:
Data: num [1:70, 1] 2.95 0.852 -0.139 1.347 2.485 ...
- attr(*, "dimnames")=List of 2
..$ : NULL
..$ : chr "t_n"
Indexed by objects of class: [POSIXct,POSIXt] TZ: GMT
xts Attr
try the code below,
if you use different upper and lower limits you might get different parameter
estimates
HTH, Victor
standard.curve<-data.frame(conc=c(50, 25, 12.5, 6.25, 3.125, 1.563, 0.781,50,
25, 12.5, 6.25, 3.125, 1.563, 0.781),absorb=c(1.918, 1.251, 1.104, 0.719,
0.403, 0.
another option is to use reshape()
x<-data.frame(x1=rep(1:3,each=3),x2=letters[1:9])
x$id<-rep(1:3,3)
dur<-reshape(x,timevar="x1",idvar="id",direction="wide")
dur<-dur[,-1]
colnames(dur) <- paste("
Here is a more clear example:
# Create the ftable object
oftable<-ftable(Titanic, row.vars = 4,col.vars=c(2,3))
require(gridExtra)
#Draw the grid, but the rows and heads are missing
grid.draw(tableGrob(oftable,
show.csep=TRUE, show.rsep=TRUE, show.box=TRUE,
sepa
object that
prints all the head columns.
Thanks in advance
Victor
--
View this message in context:
http://r.789695.n4.nabble.com/grid-table-with-head-of-two-rows-tp3219992p3219992.html
Sent from the R help mailing list archive at Nabble.com.
__
R-help
although the code somehow didn't work on my Vista / R 2.8,
it did work perfectly on a XP machine / R 2.10
I've been trying to fix this for days,
Thank you very much for your help!
__
02/01/2011 19:30, David Winsemius < dwinsem
I guess you should specify x and y variables:
plot(x=PCECTPI$var1, y=PCECTPI$var2, axes = FALSE)
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PLEASE do read the posting guide http://www.R-project.org/posting-gui
$var1,pos=4)
title(x=15,y=5,expression("how to substitute the < = with the " <=
"symbol"),font=5)
Please, note that the data must come from a table (not manually fed in a
text command)
I received help yesterday an
_
Em 01/01/2011 20:05, Victor F Seabra < vsea...@uol.com.br > escreveu:
Dear all,
Please, when I use the command:
table1<-read.table("table1.txt", header=TRUE, sep="\t")
cells that contain \ u 2264 (corresponding to <= si
)
plot(NULL,xlim=c(1,10),ylim=c(1,10))
text(5,5,"\u2264")
dev.off()
I'm using windows vista, my system is in English, R v2.8.1
thanks, Victor
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.
Is there a way to fix that?
thanks, Victor
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Please, you need to read.table to R as my problems start there
If you want you can download the txt file at the link below
https://docs.google.com/leaf?id=0BweZgDxYn9BkNmY1NThmMDEtOWUxZS00MzE0LTk0NTQ
tYzdlODMxODgxYzJh&hl=en
thanks, Vi
and ">="
> # and then plot an hifen under the "<" or the ">" sign.
> # This worked to fix both problems, but is hard to do and
> # impossible to automate (or at least very difficult)
>
> #Please, does anyone know a better approach?
To accomp
,ylab="",axes=FALSE,xlab="")
text(y=table1$ypos,x=2,table1$animal)
text(y=table1$ypos,x=4,table1$var1)
text(y=table1$ypos,x=8,table1$var2)
dev.off()
#
#
# A solution would be to plot "<" or ">" instead of "<=" and &quo
"bill >= tony" "bill \u2265 tony"
"9" "fish" "dude <= bro" "dude \u2264 bro"
By the way, I'm running R on windows and didn't try any of this on Linux.
thanks in advance, Victor
Â
Â
Victor Faria Sea
uot;",axes=FALSE,xlab="")
text(y=table1$ypos,x=2,table1$animal)
text(y=table1$ypos,x=4,table1$var1)
text(y=table1$ypos,x=8,table1$var2)
dev.off()
#My solution was to plot "<" or ">" instead of "<=" and ">="
# and then plot
Dear all,
I'm writing code to do automatically several
calculations and gather the results in a matrix.
I have the following vectors and
I just want to make a matrix with them:
VD1
VD2
VD3
...
VD12
*In this case, this series of vectors stops there, in 12,
but it could be a higher number or sma
Hey, check this link: http://www.burns-stat.com/pages/Tutor/R_inferno.pdf
Greetings
Víctor
De: r-help-boun...@r-project.org en nombre de Peng Yu
Enviado el: jue 17/09/2009 10:43
Para: r-h...@stat.math.ethz.ch
Asunto: [R] r-inferno.pdf with detailed table of c
with larger data, feel free to do so ... unless you
>>> explicitly write code to use >1 cpu, you'll still have another cpu
>>> free to do with what you will (assuming you have enough ram).
>>>
>>> -steve
>>>
>>>> On 9/11/09 10:32 AM, Ma
Hi all,
I have been using R on Windows for a long time, but now I am ready to move to
Mac OS X, but I was just wondering if R works better on Mac than on Windows.
This is because I had some memory size issues in the past.
Another question is if some of you know an R editor for Mac (just like
ns during the for looping and all previous results are lost.
Can anyone help me to avoid that my looping stops after the error message?
Thanks in advance,
Victor Landeiro
PS: A reproducible example is above, but there is a chance that the error
message do not appears, and i reaches 1000:
for(i
It' true, but if you type -8^(1/3) returns -2, and if you type -8^1/3 it
returns -2.6, maybe there are some rules about parenthesis...
regards
Víctor
De: r-help-boun...@r-project.org en nombre de Dave DeBarr
Enviado el: sáb 18/07/2009 05:04
Para: r-help@r
Wonderful!!! It works!!! Thank you very much Daniel. I owe you one.
Cheers
Victor
De: Daniel Malter [mailto:dan...@umd.edu]
Enviado el: jue 09/07/2009 10:44
Para: Victor Manuel Garcia Guerrero; r-help@r-project.org
Asunto: AW: [R] Population pyramids
Thanks Jim, I'll try it and I'll keep you informed.
All the best,
Victor
De: Jim Lemon [mailto:j...@bitwrit.com.au]
Enviado el: jue 09/07/2009 05:54
Para: Victor Manuel Garcia Guerrero
CC: r-help@r-project.org
Asunto: Re: [R] Population pyramids
axis(1,pretty(c(0:1200),n=5),
hadj=NA,padj=NA,cex.axis=0.5,las=1)
Víctor Manuel García Guerrero
Doctorado en Estudios de Población,
CEDUA, COLMEX
Camino al Ajusco N° 20, Pedregal de Sta. Teresa
C.P.10740, Tlalpan, México, D.F.
* : vmgar...@colmex.mx
( : 5617-9016
-Mensa
Yes, but my issue is because I need to plot a pop pyramid with confidence
intervals, and the pyramid function does not work in that way. Thanks Daniel.
-Mensaje original-
De: Daniel Malter [mailto:dan...@umd.edu]
Enviado el: mié 08/07/2009 11:36
Para: Victor Manuel Garcia Guerrero; r
...@gmail.com]
Enviado el: mié 08/07/2009 11:32
Para: Victor Manuel Garcia Guerrero
CC: r-help@r-project.org
Asunto: Re: [R] Population pyramids
Hi Victor,
See
http://bm2.genes.nig.ac.jp/RGM2/R_current/library/plotrix/man/pyramid.plot.html
<http://bm2.genes.nig.ac.jp/RGM2/R_current/library/plotrix/
sign in the bar plot in
such way that I have no-sign numbers, both in left and right side of the graph.
I have been trying all day long and I could not succed.
Thanks...
Victor
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Hi,
We are trying to classify atmospheric patterns using PCA and kmeans. In
T-mode, the (non-normalized) loadings of the PCs are used as input
variables for the k-means classification.
As first step we perform PCA using "princomp" but the computed loadings
produced by princomp are normalized
Is there a way to obtain the parameters (mean, sd, amplitude) of the
gaussian functions obtained in a density fit to data. The faithful
$waiting times is a standard example. The 2-gaussian fit is very nice,
but how can I obtain the parameters?
Thanks for your help.
Regards,
Victor
I got the same error.
> sessionInfo()
R version 2.6.0 (2007-10-03)
i386-pc-mingw32
locale:
LC_COLLATE=Spanish_Colombia.1252;LC_CTYPE=Spanish_Colombia.1252;LC_MONETARY=Spanish_Colombia.1252;LC_NUMERIC=C;LC_TIME=Spanish_Colombia.1252
attached base packages:
[1] stats graphics grDevices utils
Hi,
you might try this:
set.seed(100)
m <- 10
size.a<- 10
prob.a<- 0.3
prior.constant = 0
draw1 = rbinom( m , size.a, prob.a )
beta.draws <- function(draw, size.a, prior.constant, n) {
rbeta(n, prior.constant + draw, prior.constant + size.a - draw)
}
bdraws <- sapply(d
h NA, then filled.contour will not plot in those areas.
Hope this helps,
-Original Message-
From: [EMAIL PROTECTED] [[2]mailto:[EMAIL PROTECTED]
project.org] On Behalf Of Victor Homar
Sent: Tuesday, September 16, 2008 9:54 AM
To: [EMAIL PROTECTED]
Subject: [R] Blank certain areas of a contour plot
Hi,
I'm interpolating a list of syncronous accumulated precipitation
observations collected over a number of raingauge stations sited over
land, over a regular lat/lon grid using akima's interp().
Then, I plot and locate geographycally the resulting field with a
filled.contour() and a call t
Hi,
2008/8/21 Mario Maiworm <[EMAIL PROTECTED]>
> Hi,
> I want to fit some psychophysical data with cumulative gaussians. There is
> quite a convenient toolbox for matlab called 'psignifit' (formerly known as
> 'psychofit'). It allows the lower bound of the sigmoid to vary slightly
> from
> zero,
Hi,
I'm trying to plot a field obtained from the atmospheric model WRF-NMM
which uses a "Rotated Lat-Lon¨ map projection.
The WRF documentation mentions that:
· Rotates the earth's lat/lon grid such that the intersection of the
equator and prime meridian is at the center of the model domain.
Hi, I'm trying to use sapply to compute the min of several variables, each
of them stored in data.frames, grouped as a list:
Is it normal that mean() and min() produce different objects dimensions?
> str(dats)
List of 5
$ log20:'data.frame': 83 obs. of 5 variables:
..$
Hi Paul,
Thanks for the answer. I temporarily did it with the subplot function
from the TeachingDemos package but I like this version much better.
Best,
Victor.
Paul Hiemstra wrote:
Victor Homar wrote:
Dear R users and helpers,
I'm trying to find an example of a histogram plot as an
Dear R users and helpers,
I'm trying to find an example of a histogram plot as an inset (upper
right or left corner) of another histogram.
Anyone has an example of that?
Thanks for your help,
Víctor.
--
---
Víctor Homar San
s are lost.
-Original Message-
From: Prof Brian Ripley [mailto:[EMAIL PROTECTED]
Sent: Friday, May 23, 2008 12:46 PM
To: Lobanov, Victor S. [PRDUS]
Cc: r-help@r-project.org
Subject: Re: [R] problem using embedded R
All the usual questions:
What OS?
What version of R?
What is meant by 'environme
environment path gets reset to the system's default
value, which renders R unusable. I wonder if anyone had experienced a
similar problem and knows how to fix it?
Victor
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If I copy the following commands in my batch file to the R console, R
creates a file named "basicStatsIBM.lis" with the program output in it:
Sortie <- file(description = "basicStatsIBM.lis", open = "wt", blocking =
TRUE,
encoding = "UTF-8")
sink(file = Sortie, append = FALSE, type = "outp
for spatial autocorrelation
and include an online appendix with R commands!
victor
On 10/22/07, Geertje Van der Heijden <[EMAIL PROTECTED]>
wrote:
>
> Hi,
>
> I have collected data on trees from 5 forest plots located within the
> same landscape. Data within the plots are spa
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