[R] [R-pkgs] SCpubr: Generate high quality, publication-ready plots of single-cell transcriptomics data.

*functionalities in the *documentation book* <https://enblacar.github.io/SCpubr-book/>. Any kind of feedback is appreciated! Best, Enrique -- *Enrique Blanco Carmona* Developer and maintainer *SCpubr* *[CRAN package <https://cran.r-project.org/web/packages/SCpubr/index.html>] | [GitHub

[R] Installing ranger package in Ubuntu 14

I'm trying to install ranger package (any version) in Ubuntu 14 from a tar.gz file already downloaded, but unsuccessfully. System admin has already installed gcc 5.4 and g++ 5.4 and I've created a ~/.R/Makevars file pointing to these compilers instead of gcc 4.8 that comes in Ubuntu 14 by defaul

Re: [R] changing cex pointwise in lattice

This is just to make sure that a group has a value of 1 and the other of 2 dd$z <- (1:50)%%2 + 1 xyplot(y~x|group, panel=function(x,y,subscripts){panel.xyplot(x,y, cex=dd$z[subscripts])}, data=dd) Cheers, José M. Blanco El 20/07/2012 21:34, Peter Ehlers escribió: Sorry, I had meant to inc

[R] changing cex pointwise in lattice

11171L, 11219L, 11267L, 11315L, 11363L, 11411L, 11459L, 11507L, 11555L, 11603L, 11651L, 11699L, 11747L, 11795L, 11843L, 11891L, 11939L, 11987L, 12035L, 12083L, 12131L, 12179L, 12227L, 12275L)) -- --- José M. Blanco-Moreno Dept. de Biologia Vegetal (Botànica

Re: [R] Using graphics straight from R into published articles

Wow - thanks all for your helpful replies. Awesome forum. Am I right to assume that you use the postscript function to create .ps and .pdf files from R? blanco -- View this message in context: http://r.789695.n4.nabble.com/Using-graphics-straight-from-R-into-published-articles

[R] Using graphics straight from R into published articles

would like to think it is possible, better and more profession to do it all in R. I tried google and the search option but found nothing on the topic. What are the experiences for all the professionals out there that use R? Are there any articles on this specific subject? thanks, blanco -- View

Re: [R] modulo operation

or my hasty question when facing this behaviour. -- --- José M. Blanco-Moreno Dept. de Biologia Vegetal (Botànica) Facultat de Biologia Universitat de Barcelona Av. Diagonal 645 08028 Barcelona SPAIN --- phone: (+34) 934 039 86

[R] modulo operation

> 25/0.2 [1] 125 > 25 - floor(25/0.25)*0.25 [1] 0 (At least this second one is what I would expect from the code in arithmetic.c, lines 168 to 178) -- --- José M. Blanco-Moreno Dept. de Biologia Vegetal (Botànica) Facultat de Biologia Universitat de

[R] Error message: attempt to set rownames on object with no dimensions

set, random= ~1|ID) summary(lme.1)* If I don't use the as.factor I have no problems but I don't think this is the correct way to proceed... The other variables I use can have any value. Can anybody help me please? Thanking you in advance, Regard

[R] cbind with vectors of different lengths?

[5] 17.4    0.9  thanks and greets. Arantzazu Blanco Bernardeau Dpto de Química Agrícola, Geología y Edafología Universidad de Murcia-Campus de Espinardo _ ¿Un navegador seguro buscando es

Re: [R] Creating dummy variables

hey thanks I did solve it already, it had more mistakes as you see :S bye Arantzazu Blanco Bernardeau Dpto de Química Agrícola, Geología y Edafología Universidad de Murcia-Campus de Espinardo > Date: Thu, 3 Jun 2010 14:40:30 + > From: bt_jan...@yahoo.de > Subject: AW: [R]

[R] Creating dummy variables

1:length(datos$cambi)){if(datos$codsuelo[i]>=3.1 && datos$codsuelo[i]>=3.3){datos$cambi[i]=1}else{0} } and so on... but anyway R answers that a necesary value TRUE/FALSE is not existing. What can I do? thanks a lot!! Arantzazu Blanco Bernardeau Dpto de Química Agrícola, Geología y

[R] FW: "Re: Change class factor to numeric"

Hello everybody the problem has been solved. It was my mistake not to be ensured that any N/A had dissapeared. I do apologize for the inconveniences caused ;) friendly greeting sfrom Spain! Arantzazu Blanco Bernardeau Dpto de Química Agrícola, Geología y Edafología Universidad de Murcia

Re: [R] (no subject)

r more. If not, I could make an english version of the file to send, so you can try the commands. Thanks a lot for your help! Arantzazu Blanco Bernardeau Dpto de Química Agrícola, Geología y Edafología Universidad de Murcia-Campus de Espinardo

Re: [R] "Re: Change class factor to numeric"

12 2 2 4 2 2 ...  $ SUELO   : Factor w/ 40 levels "Arenosol calcárico",..: 30 3 8 3 36 7 7 10 7 3 ... In the other side, the variable Drenaje (drainage) that is factor mode, appears as integer. Thanks a lot! Arantzazu Blanco Bernardeau Dpto de Química Agrícola, Geología y Edafo

[R] "Re: Change class factor to numeric"

urposes). > The decimal commas have been converted to decimal points, so I have no idea > of what to do. > Thanks a lot > > > Arantzazu Blanco Bernardeau > Dpto de Química Agrícola, Geología y Edafología > Universidad de Murcia-Campus de Espinardo > > > > > > &

[R] (no subject)

and even entering 'as.numeric(levels(arcilla))[arcilla]'the variable is resting as factor, and the linear model is not valid (for my purposes). The decimal commas have been converted to decimal points, so I have no idea of what to do. Thanks a lot Arantzazu Blanco Bernardeau Dpto de Químic

Re: [R] [R-sig-Geo] error in trmesh (alphahull package)

eers, José M. Blanco Murray Richardson escribió: Hello R community, I have cross-posted with r-sig-geo as this issue could fall under either interest group I believe. I just came accross the alphahull package and am very pleased I may not need to use CGAL anymore for this purpose. However, I