Re: [R] PCRE configure problem with R-4.0.0

2020-05-06 Thread Patrick Connolly
, or similar to |> install recent software releases on old systems. Thanks. Condo is a new one to me. |> |> Best, |> Ista |> |> > [...] |> > |> > |> > -- |> > ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. |> >___Patrick Connolly |> > {~._.~} Great minds discuss idea

Re: [R] PCRE configure problem with R-4.0.0

2020-05-05 Thread Patrick Connolly
On Mon, 04-May-2020 at 11:03AM -0400, Ista Zahn wrote: |> On Mon, May 4, 2020 at 3:51 AM Ivan Krylov wrote: |> > |> > First of all, you mentioned Linux Mint, so you might get better advice |> > on R-SIG-Debian mailing list. |> > |> > On Mon, 4 May 2020 16:15:42 +

[R] PCRE configure problem with R-4.0.0

2020-05-03 Thread Patrick Connolly
version. The only packages with prce2 in the name are these: > aptitude search pcre2 v apertium-pcre2 - v apertium-pcre2:i386 - Suggestions welcome. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~

Re: [R] TWITTER API environment variables

2020-04-08 Thread Patrick Connolly
repeating the steps described in the tutorial on |> your second computer instead of cloning the settings from the computer |> #1? There might be some other settings not correctly copied. |> |> HTH, |> Kimmo |> |> ke, 2020-04-08 kello 19:02 +1200, Patrick Connolly kirjoitti: |&

Re: [R] TWITTER API environment variables

2020-04-08 Thread Patrick Connolly
|> Have you already read this: |> |> https://cran.r-project.org/web/packages/rtweet/vignettes/auth.html |> |> I think they explain rather well how to use Twitter tokens with |> rtweet... |> |> HTH, |> Kimmo |> |> ke, 2020-04-08 kello 17:19 +1200, Patrick C

[R] TWITTER API environment variables

2020-04-07 Thread Patrick Connolly
bles which also worked for a short time. Recommendations please. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss events (:_~*~_:)

Re: [R] The "--slave" option

2019-09-19 Thread Patrick Connolly
gt; > |> >__ |> >R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see |> >https://stat.ethz.ch/mailman/listinfo/r-help |> >PLEASE do read the posting guide |> >http://www.R-project.org/posting-guide.html |>

Re: [R] Bounding box on plotting files inserted into a LaTeX document

2019-05-17 Thread Patrick Connolly
On Thu, 16-May-2019 at 07:52PM -0400, Marc Schwartz wrote: |> |> |> > On May 16, 2019, at 7:04 PM, Patrick Connolly wrote: |> > [...] |> |> |> Patrick, |> |> Are you explicitly calling postscript() in an R session to create the figure? |>

[R] Bounding box on plotting files inserted into a LaTeX document

2019-05-16 Thread Patrick Connolly
to avoid. It must be possible since graphs were included in LaTeX documents for decades before there was Rstudio. TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_

Re: [R] Debugging Rmarkdown

2019-04-23 Thread Patrick Connolly
run each chunk in sequence starting from an fresh restart of |> R by copying code to the R console. However you can use knitr::purl |> to extract all of the code into a regular R script to do whatever |> debugging you are most familiar with. |> On April 19, 2019 2:03:00 PM PDT, Patr

Re: [R] Debugging Rmarkdown

2019-04-19 Thread Patrick Connolly
code chunks to reuse in later chunks? (I > haven't worked with knitr lately, so this may be nonsense). > > Cheers, > Bert > > On Fri, Apr 19, 2019 at 2:03 PM Patrick Connolly > mailto:p_conno...@slingshot.co.nz>> wrote: > > > On 19/04/19 12

Re: [R] Debugging Rmarkdown

2019-04-19 Thread Patrick Connolly
er > The combination of some data and an aching desire for an answer does > not ensure that a reasonable answer can be extracted from a given body > of data. ~ John Tukey > /////// > > <https:

[R] Debugging Rmarkdown

2019-04-18 Thread Patrick Connolly
rch x86_64 os linux-gnu system x86_64, linux-gnu Rstudio Version 1.1.383 -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great min

[R] BLUPS from lme models

2019-01-03 Thread Patrick Connolly
random term from the model, or setting it as a fixed effect? To get something meaningful, one needs to choose which random effects are relevant to the topic under study? Thank you. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___

Re: [R] Corrupting files while copying (was Re: saveRDS() and readRDS() Why? [solved, pretty much anyway])

2018-11-30 Thread Patrick Connolly
I'd be interested to know if anyone can replicate what I experienced. VBox version: 5.1.22 r115126 (Qt5.6.2) Versions of R and OSes below: On Sun, 18-Nov-2018 at 09:44PM +1300, Patrick Connolly wrote: |> Sequence of steps: |> |> Using R-3.5.1 and Windows 7 with the latest R

Re: [R] Corrupting files while copying (was Re: saveRDS() and readRDS() Why? [solved, pretty much anyway])

2018-11-18 Thread Patrick Connolly
ication instructions, including telling us what |> host and gest operating systems you are using (including the |> versions), the version |> of virtualbox you used, and exactly what steps are needed to |> reproduce the surprising behavior. |> |> Best, |> Ista |> On Wed, Nov 1

[R] Corrupting files while copying (was Re: saveRDS() and readRDS() Why? [solved, pretty much anyway])

2018-11-13 Thread Patrick Connolly
ying the files corrupted them. How did you copy them |> >> (with R |> >> or cp or copy or ftp, etc.)? I don't see how this has anything to do |> >> with R. |> >> |> >> Bill Dunlap |> >> TIBCO Software |> >> wdunlap tibco.com [1] |&

Re: [R] saveRDS() and readRDS() Why? [solved, pretty much anyway)

2018-11-12 Thread Patrick Connolly
ot;y.rds") will work. An undocumented feature? Thanks to all who contributed. On Sat, 10-Nov-2018 at 08:48PM +1300, Patrick Connolly wrote: |> On Thu, 08-Nov-2018 at 11:06AM +0100, Martin Maechler wrote: |> |> |> >>>>> Patrick Connolly |> |> >>>>

Re: [R] saveRDS() and readRDS() Why? [solved, kind of]

2018-11-10 Thread Patrick Connolly
On Thu, 08-Nov-2018 at 11:06AM +0100, Martin Maechler wrote: |> >>>>> Patrick Connolly |> >>>>> on Thu, 8 Nov 2018 20:27:24 +1300 writes: [...] |> > |> > I still don't know Why, but I know How. |> |> Hmm.. and nobody has been ab

Re: [R] saveRDS() and readRDS() Why? [solved, kind of]

2018-11-07 Thread Patrick Connolly
readRDS(file = "rawData.rds") did! So what I needed was serialize but not unserialize. I still don't know Why, but I know How. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Avera

Re: [R] saveRDS() and readRDS() Why?

2018-11-07 Thread Patrick Connolly
|> |> On 07/11/18 08:13, Eric Berger wrote: |> >What do you see at the OS level? |> >i.e. on windows |> >DIR rawData.rds |> >on linux |> >ls -l rawData.rds |> >compare the file sizes on both. |> > |> > |> >On Wed, Nov 7, 2018 at 9:56 AM

Re: [R] saveRDS() and readRDS() Why?

2018-11-07 Thread Patrick Connolly
They're both about 3kb. On 7/11/18 9:13 PM, Eric Berger wrote: > What do you see at the OS level? > i.e. on windows > DIR rawData.rds > on linux > ls -l rawData.rds > compare the file sizes on both. > > > On Wed, Nov 7, 2018 at 9:56 AM Patrick Connolly > mailto

[R] saveRDS() and readRDS() Why?

2018-11-06 Thread Patrick Connolly
s could have different permissions for different OSes, but should that affect the R objects? TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss events (:_~*~_:)

Re: [R] Corrupted package?[solved]

2018-11-04 Thread Patrick Connolly
On Thu, 01-Nov-2018 at 08:51PM +1300, Patrick Connolly wrote: |> On Wed, 31-Oct-2018 at 07:30PM +0100, peter dalgaard wrote: |> |> |> Hm, a source install to r-devel gave me |> |> |> |> Peter-Dalgaards-MacBook-Air:BUILD pd$ ls -l library/pkgconfig/R/pkgconfig.rdb |>

Re: [R] Corrupted package?

2018-11-01 Thread Patrick Connolly
scales_1.0.0 [41] cli_1.0.1 stringi_1.2.4 stopwords_0.9.0 fastmatch_1.1-0 [45] tools_3.5.1 glue_1.3.0hms_0.4.2 parallel_3.5.1 [49] colorspace_1.3-2 bindr_0.1.1 haven_1.1.2 modeltools_0.2-22 > |> -pd |> [..] -- ~.~.~.~.~.~

[R] Corrupted package?

2018-10-31 Thread Patrick Connolly
d? I removed the package and reinstalled it, but that made no difference. Is this documented anywhere? TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_

[R] Why can't I make use of tcltk in this installation?

2018-09-10 Thread Patrick Connolly
#x27;t help. Where else should I be looking for a difference? TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss events (:_~*~_:) Small minds discuss peo

Re: [R] Plots in ioslides and R markdown

2018-08-26 Thread Patrick Connolly
On Sat, 25-Aug-2018 at 08:10PM -0400, Duncan Murdoch wrote: |> On 25/08/2018 7:37 PM, Patrick Connolly wrote: |> >On Sat, 25-Aug-2018 at 07:53AM -0400, Duncan Murdoch wrote: |> > |> >|> On 25/08/2018 6:21 AM, Patrick Connolly wrote: |> >|> >--- |>

Re: [R] Plots in ioslides and R markdown

2018-08-25 Thread Patrick Connolly
On Sat, 25-Aug-2018 at 07:53AM -0400, Duncan Murdoch wrote: |> On 25/08/2018 6:21 AM, Patrick Connolly wrote: |> >--- |> >title: "Barking up the wrong tree" |> >author: "Patrick Connolly" |> >date: "`r format(Sys.time(), '%a %d/%m/%Y %H

Re: [R] Plots in ioslides and R markdown

2018-08-25 Thread Patrick Connolly
I've simplified it so that it's reproducible: --- title: "Barking up the wrong tree" author: "Patrick Connolly" date: "`r format(Sys.time(), '%a %d/%m/%Y %H:%M')`" output: ioslides_presentation: default slidy_presentation: default beam

Re: [R] Plots in ioslides and R markdown

2018-08-24 Thread Patrick Connolly
t would be clearer for me to have saved the objects to a file by a different name. Is there a better way to do that?? |> On August 23, 2018 2:15:19 AM PDT, Patrick Connolly wrote: |> >I'm having difficulty getting plots into ioslides. It seems to me |> >that the scale is c

[R] Plots in ioslides and R markdown

2018-08-23 Thread Patrick Connolly
ke a badly scaled plot about 25 times the size of the plotting area, so only a fragment is visible. This is the code I've tried: --- title: "Barking up the wrong tree" author: "Patrick Connolly" date: "`r format(Sys.time(), '%a %d/%m/%Y %H:%M')`" output: iosl

Re: [R] parallel processing in r...

2018-06-30 Thread Patrick Connolly
If you use gkrellm, you'll get a plot of each core's activity so it's easy to see how many are being used. yum install gkrellm. HTH On 07/01/2018 06:16 AM, Jeff Newmiller wrote: > Use "top" at the bash prompt. > > Read about the "mc.cores" parameter to mclapply. > > Make a simplified example v

Re: [R] OT --- grammar.

2018-06-30 Thread Patrick Connolly
-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see |> https://stat.ethz.ch/mailman/listinfo/r-help |> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html |> and provide commented, minimal, self-contained, reproducible code. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~

Re: [R] Using gutenbergr with a firewall

2018-02-15 Thread Patrick Connolly
ou might also be having |> trouble with anti virus software. -- |> Sent from my phone. Please excuse my brevity. |> |> On February 13, 2018 10:55:40 PM PST, Patrick Connolly wrote: |> >I can use the gutenberg_download() function in the gutenbergr package |> >on a co

[R] Using gutenbergr with a firewall

2018-02-13 Thread Patrick Connolly
on on anyone else's experience. Thank you. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___ Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss events (:_~*~_:) S

Re: [R] Updating Rcpp package when it is claimed by dplyr

2018-02-02 Thread Patrick Connolly
; On 2 Feb 2018, at 08:15 , Jeff Newmiller wrote: |> > |> > Your last statement is extremely unlikely to be true. The dplyr package should not be present in a vanilla environment, so there should be no such conflict. |> > -- |> > Sent from my phone. Please excuse my brevity.

[R] Updating Rcpp package when it is claimed by dplyr

2018-02-01 Thread Patrick Connolly
loaded via a namespace (and not attached): [1] compiler_3.4.3 magrittr_1.5 R6_2.1.2 assertthat_0.1 parallel_3.4.3 [6] tools_3.4.3DBI_0.3.1 dplyr_0.4.3Rcpp_0.12.3grid_3.4.3 -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___P

[R] Function gutenberg_download in the gutenbergr package

2018-01-23 Thread Patrick Connolly
ingi_1.1.5lazyeval_0.2.1 munsell_0.4.3 [43] slam_0.1-42 broom_0.4.2 > -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_

[R] Distributions for gbm models

2017-12-14 Thread Patrick Connolly
Shrinkage 4n.minobsinnode numeric Min. Terminal Node Size Is that a limitation of the caret package? Or is there something I'm not getting? -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~}

[R] Using bartMachine with the caret package

2017-11-24 Thread Patrick Connolly
he 'recipe' method. All the specific links in the help files were dead. Any suggestions welcome. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_

[R] Final models from caret's train function

2017-10-31 Thread Patrick Connolly
lways be true, so is that saying anything? Or is it a case of a model for prediction being useless for inference? > version _ platform x86_64-pc-linux-gnu arch x86_64 os

[R] How to install packages from GitHubb

2017-10-29 Thread Patrick Connolly
ent for install_github()? TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss events (:_~*~_:) Small minds discuss people (_)-(_)

Re: [R] Error in readRDS(dest) SOLVED

2017-06-06 Thread Patrick Connolly
On Wed, 31-May-2017 at 10:05AM -0400, Martin Morgan wrote: |> On 05/31/2017 04:38 AM, Patrick Connolly wrote: |> >When I check out those directories in a terminal, there's a big diffrence: |> > |> >With R-3.4.0 |> >~ > ll /tmp/RtmpFUhtpY |> >total 4 |>

Re: [R] Error in readRDS(dest) (was Re: Error with installed.packages with R 3.4.0 on Windows)

2017-05-31 Thread Patrick Connolly
bear with a small brain, I can't figure out what differences should be expected. I have no idea what populates those 'dest' directories. TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_

Re: [R] Error in readRDS(dest) (was Re: Error with installed.packages with R 3.4.0 on Windows)

2017-05-24 Thread Patrick Connolly
fers to a repo and is zero length whereas 3.3.3 refers to a library. To me that would appear to be a major difference. That must have something to do with it. But what? Since the latter works and the former doesn't, it seems as though the problem is with 3.4.0's re

[R] Error in readRDS(dest) (was Re: Error with installed.packages with R 3.4.0 on Windows)

2017-05-23 Thread Patrick Connolly
On Mon, 22-May-2017 at 05:43AM -0400, Martin Morgan wrote: |> On 05/22/2017 05:10 AM, Patrick Connolly wrote: |> >Apparently it isn't harmless. |> > |> >>install.packages("withr") |> >Error in readRDS(dest) : error reading from connection |> |&g

Re: [R] Error with installed.packages with R 3.4.0 on Windows

2017-05-22 Thread Patrick Connolly
stats graphics methods base other attached packages: [1] lattice_0.20-35 loaded via a namespace (and not attached): [1] compiler_3.4.0 tools_3.4.0grid_3.4.0 > Has anyone a workaround? -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___

[R] R-3.4.0 fails test

2017-05-17 Thread Patrick Connolly
h(fd) == 10, identical(fd, format(dct <- as.POSIXlt(dlt would pass. But would that be any use? TIA (Linux Mint 17.3) -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.

[R] What is se.fit in a glm predict list?

2017-03-02 Thread Patrick Connolly
Should I remove those or would that be unnecessary? TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss events (:_~*~_:)

[R] ASReml-R lack of documentation

2017-02-27 Thread Patrick Connolly
, please let me know what you did to achieve it. Better still. if you have experience with predictions from asreml.binomial models, I have a question about a possible bug if you'd bee so kind. TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Pa

Re: [R] > Understanding strip.default & strip.custom

2016-06-30 Thread Patrick Connolly
an example but I cannot remember any of the |> details It would be amazing for anyone to remember those details. ;-) |> |> Regards |> |> Duncan |> |> |> -Original Message- |> From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Patrick |> Conno

Re: [R] > Understanding strip.default & strip.custom

2016-06-30 Thread Patrick Connolly
"The trouble with having an open mind is that people keep coming along |> and sticking things into it." |> -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) |> |> |> On Wed, Jun 29, 2016 at 1:29 AM, Patrick Connolly

Re: [R] > Understanding strip.default & strip.custom

2016-06-29 Thread Patrick Connolly
s to Duncan Mackay also. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___ Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss events (:_~*~_:) Small minds dis

Re: [R] R 3.2.4-revised is released

2016-04-13 Thread Patrick Connolly
__ |> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see |> https://stat.ethz.ch/mailman/listinfo/r-help |> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html |> and provide commented, minimal, self-contained, reproducibl

Re: [R] What "method" does sort() use?

2016-03-19 Thread Patrick Connolly
t; -pd |> |> |> |> On 18 Mar 2016, at 10:13 , peter dalgaard wrote: |> |> > |> > On 18 Mar 2016, at 10:02 , Patrick Connolly wrote: |> > |> >> I don't follow why this happens: |> >> |> >>> sort(c(LETTERS[1:5], let

[R] What "method" does sort() use?

2016-03-19 Thread Patrick Connolly
since all the uppercase ones would be before the lowercase ones. I know something different is happening but I don't know what it is (do you, Mr Jones?). Apologies to Bob Dylan. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Pa

Re: [R] How to read ./configure messages

2016-02-02 Thread Patrick Connolly
t; > Ideas greatly appreciated. |> > |> > |> > best |> > Patrick |> > |> > __ |> > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see |> > https://stat.ethz.ch/mailman/listinfo/r-help |>

Re: [R] Special characters in regular expressions

2015-09-27 Thread Patrick Connolly
on't think it does what I think you think it does... |> Somewhat safer, maybe: |> |> gsub("\\|[AK]\\|","\\|", x) |> |> (avoids surprises from, say, "LBAM 5|A|15A|3h") Thanks for that suggestion. Very simple now. |> |> -pd |> |> > [snip

[R] Special characters in regular expressions

2015-09-24 Thread Patrick Connolly
ssion that can detect "A|" *and* "K|" without collateral damage from the impact of special characters and regular characters. TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_

[R] Getting predictions for skewed t-distribution

2015-07-03 Thread Patrick Connolly
loaded via a namespace (and not attached): [1] Rcpp_0.11.3 assertthat_0.1grid_3.2.1DBI_0.3.1 [5] magrittr_1.0.1stringi_0.4-1 lazyeval_0.1.10 tools_3.2.1 [9] numDeriv_2014.2-1 parallel_3.2.1mnormt_1.5-3 -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.

Re: [R] Using and abusing %>% (was Re: Why can't I access this type?)

2015-03-28 Thread Patrick Connolly
On Fri, 27-Mar-2015 at 03:27PM +0100, Henric Winell wrote: |> On 2015-03-26 07:48, Patrick Connolly wrote: |> |> >On Wed, 25-Mar-2015 at 03:14PM +0100, Henric Winell wrote: |> > |> >... |> > |> >|> Well... Opinions may perhaps differ, but apart from '

Re: [R] Why can't I access this type?

2015-03-27 Thread Patrick Connolly
150, c("Name", "Frost")] Modify the above to match where my guess at what you tried is in error. HTH -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss ev

[R] Using and abusing %>% (was Re: Why can't I access this type?)

2015-03-25 Thread Patrick Connolly
teractive one-off use. But |> lately I've seen examples of the '%>%' operator creeping into |> functions in packages. That could indicate that %>% is seductively easy to use. It's probably true that there are places where it should be done the hard way. |&

Re: [R] Why can't I access this type?

2015-03-25 Thread Patrick Connolly
; |> |> FREE ONLINE PHOTOSHARING - Share your photos online with your friends and family! |> Visit http://www.inbox.com/photosharing to find out more! |> |> __ |> R-h

[R] Oddity using multcompView package

2014-10-30 Thread Patrick Connolly
s: [1] grid grDevices utils stats graphics methods base other attached packages: [1] dplyr_0.3.0.2 multcompView_0.1-5 lattice_0.20-29 loaded via a namespace (and not attached): [1] assertthat_0.1 DBI_0.3.1 lazyeval_0.1.9 magrittr_1.0.1 parallel_3.1.1 [6] Rcpp_0.11.3tools_3.1.1 > TIA -- ~.~.

Re: [R] Unexpected behaviour of plyr::ddply

2014-09-29 Thread Patrick Connolly
("P","G")) However: > summary(hab$tot) Min. 1st Qu. MedianMean 3rd Qu.Max.NA's 22713282640 82645440 3039000 89 Those NAs interfere with the cut() statement. The simplest work around is > hab <-

Re: [R] yaxs Causes Boundary Line Colour to Change

2014-08-25 Thread Patrick Connolly
_ |> R-help@r-project.org mailing list |> https://stat.ethz.ch/mailman/listinfo/r-help |> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html |> and provide commented, minimal, self-contained, reproducible code. -- ~.~.~.~.~.~.~.~.

Re: [R] Fwd; Trellis devices and pointize

2014-06-23 Thread Patrick Connolly
Thanks Deepayan, I'd never have figured that out for myself. On Sat, 21-Jun-2014 at 08:47PM +0530, Deepayan Sarkar wrote: |> On Sat, Jun 21, 2014 at 1:00 PM, Patrick Connolly |> wrote: |> > Hello Deepayan, |> > |> > The question below I asked on the Rhelp list.

Re: [R] Trellis devices and pointize

2014-06-12 Thread Patrick Connolly
27;d done in panel functions with an argument called gp but I get no error message or any difference in my resulting plot. I know I can fiddle with trellis.par.get() and trellis.par.set() but that's a bit long-winded when it's so simple to do in base graphics. TA |> |> |> On

[R] Trellis devices and pointize

2014-06-08 Thread Patrick Connolly
ger)# pointsize ignored print(pik) dev.off() TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss events (:_~*~_:) Small minds discuss people (_)-(_

Re: [R] how to make R plot under Linux

2014-05-15 Thread Patrick Connolly
t; > |> >__ |> >R-help@r-project.org mailing list |> >https://stat.ethz.ch/mailman/listinfo/r-help |> >PLEASE do read the posting guide |> >http://www.R-project.org/posting-guide.html |> >and provide commented, minimal,

Re: [R] Character type and size using spatstats

2014-05-15 Thread Patrick Connolly
C, 5, edge = FALSE, weights = marks(ppp9C)$New), |> >main = "") |> > plot(ppp9C, add = TRUE, cols = "red", chars = |> >levels(marks(ppp9C)$Concept), |> >maxsize = max(marks(ppp9C)$New)/20) |> >## chars is ignored and no error message to comp

Re: [R] listserv subscription

2014-02-24 Thread Patrick Connolly
de commented, minimal, self-contained, reproducible code. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss event

Re: [R] creating an equivalent of r-help on r.stackexchange.com ? (was: Re: Should there be an R-beginners list?)

2014-02-07 Thread Patrick Connolly
simpler effective means of communications are being taken over by whizz-bang complicated inefficient ones is a cause for concern. I belong to a group (as distinct from the aforementioned minority group) which has never known the delights of an efficient mailing list and flounders around try

Re: [R] Categorizing and displaying excel data in tabular format

2014-02-07 Thread Patrick Connolly
doesn't look anything like any type of plot I've seen. It's more like a table in HTML. |> |> Is there any function which I can use for that. If that's what you need, check out the toHTML function in the tools package. HTH -- ~.~.~.~.~.~.~.~.~.~.~.

Re: [R] Is this a bug or am I making a mistake?

2014-01-12 Thread Patrick Connolly
> it is believed to be a possible bug, I would be glad to package up the |> > data that is generating the issue, but not sure where to place such a |> > large data set. |> > |> > __________ |> > R-help@r-project.org mailing list |

Re: [R] RWeka and multicore package

2013-10-22 Thread Patrick Connolly
t |> https://stat.ethz.ch/mailman/listinfo/r-help |> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html |> and provide commented, minimal, self-contained, reproducible code. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.

Re: [R] plot multiple graphs in one graph and in multiple windows

2013-10-03 Thread Patrick Connolly
fo/r-help |> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html |> and provide commented, minimal, self-contained, reproducible code. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~}

Re: [R] Appropriateness of R functions for multicore

2013-08-19 Thread Patrick Connolly
PLEASE do read the posting guide |> >http://www.R-project.org/posting-guide.html |> >and provide commented, minimal, self-contained, reproducible code. |> |> __ |> R-help@r-project.org mailing list |> https://stat.ethz.ch/mailma

Re: [R] Fwd: about plantbreeding library

2013-08-16 Thread Patrick Connolly
quires something you don't have. All of your errors have a similar basis. Maybe you need to look through a few tutorials to understand a few basics, such as using ls() to see what's in your working directory. [] HTH -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connoll

Re: [R] getting rid of .Rhistory and .RData

2013-08-14 Thread Patrick Connolly
__ |> R-help@r-project.org mailing list |> https://stat.ethz.ch/mailman/listinfo/r-help |> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html |> and provide commented, minimal, self-contained, reproducible code. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.

[R] Rmpi installs before R-3.0.0 but not since

2013-08-13 Thread Patrick Connolly
1] grid_3.0.1 multicore_0.1-7 > TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss events (:_~*~_:) Small minds discuss people (_)-(_)

Re: [R] R Job taking longer in Linux than in Windows

2013-08-07 Thread Patrick Connolly
.org mailing list |> https://stat.ethz.ch/mailman/listinfo/r-help |> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html |> and provide commented, minimal, self-contained, reproducible code. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~

Re: [R] .eps files and powerpoint

2013-07-23 Thread Patrick Connolly
ide http://www.R-project.org/posting-guide.html |> and provide commented, minimal, self-contained, reproducible code. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas

[R] Understanding how nls() works

2013-04-23 Thread Patrick Connolly
could supply my xx dataframe if it's indispensible to the explanation. TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss

Re: [R] How to use parentheses and degree symbol together?

2013-03-27 Thread Patrick Connolly
rent font family for the brackets, evidently from the Symbol family, not Helvetica (or whatever). Probably more appropriate since it's more akin to the other characters' features. So, not only more elegant, but better looking. |> |> HTH, |> Pascal |> |> |> On 26/03/13 16:5

Re: [R] How to use parentheses and degree symbol together?

2013-03-26 Thread Patrick Connolly
;t I think of that? I knew there had to be something more elegant than what I had. Thanks |> |> HTH, |> Pascal |> |> |> On 26/03/13 16:55, Patrick Connolly wrote: |> >On Tue, 26-Mar-2013 at 04:20PM +0900, Pascal Oettli wrote: |> > |> >|> Hi, |&

Re: [R] How to use parentheses and degree symbol together?

2013-03-26 Thread Patrick Connolly
ontinues. Thanks |> text(0, .4, substitute(paste(Temperature, B * degree, "C)"), list(B |> = " ("))) |> |> Hope this help, |> Pascal |> |> |> |> On 26/03/13 16:12, Patrick Connolly wrote: |> >I'm interested in using a regular bracket wit

Re: [R] RWeka and Back Propagation NN

2013-03-26 Thread Patrick Connolly
don't have much of an idea of what you have and what you want to do with it, but the above might give you some ideas. HTH -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great mind

[R] How to use parentheses and degree symbol together?

2013-03-26 Thread Patrick Connolly
~ C)) But I'm not that easily pleased. I prefer it to look like this: > text(0, .4, substitute(paste(Temperature, B * degree, "C)"), list(B = " ("))) It looks fine, but I'm sure there's a more elegant way to do it. Is there? -- ~.~.~.~.~.~.~.~.~.~.~.~.

Re: [R] Accuracy of some classifiers

2013-03-14 Thread Patrick Connolly
rg/posting-guide.html |> and provide commented, minimal, self-contained, reproducible code. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average mind

[R] Debugging (was Re: HELP!!!)

2013-02-28 Thread Patrick Connolly
mailman/listinfo/r-help |> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html |> and provide commented, minimal, self-contained, reproducible code. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds di

Re: [R] Controlling Order of Panels in Lattice Trellis Plots

2013-02-24 Thread Patrick Connolly
idea: > cc <- 13:1 > levels(as.factor(cc)) [1] "1" "2" "3" "4" "5" "6" "7" "8" "9" "10" "11" "12" "13" > levels(as.factor(as.charact

Re: [R] Equivalent of box() in grid graphics

2013-01-29 Thread Patrick Connolly
.) |> grid.segments(0, 0, 1, 0, gp=gpar(lwd=1.5, col="red")) |> }) |> |> Is that the sort of effect you want? I didn't really want thick red lines, but now that I know how to use grid.segments, I can do what I need. Thanks --

Re: [R] Simple use of dcast (reshape2 package)

2013-01-23 Thread Patrick Connolly
0 1 |> > 4 3 0 1 |> > 5 8 2 0 |> > 6 9 1 0 |> > 710 1 0 |> > 811 1 0 |> > |> > As per the help file, it's giving counts of the numbers in the Eaten |> > column since that's the default fun.aggregate v

[R] Simple use of dcast (reshape2 package)

2013-01-22 Thread Patrick Connolly
the Eaten column since that's the default fun.aggregate value. My questions are: what fun.aggregate would work? Alternatively, can value.var be set to something useful? TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~}

Re: [R] Log scale on y axis of parallel coordinate plot (lattice)

2013-01-16 Thread Patrick Connolly
f_n, panel = panel.spiderplot, |> horizontal.axis = FALSE, : |> cannot have log y-scale Check out how to use the scales list in the help for xyplot(). You might need to brush up on how the help for axis() to see which parameters you need to set. HTH -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.

Re: [R] abline of an lm fit not correct

2012-12-13 Thread Patrick Connolly
|> ?? |> Thanks |> [[alternative HTML version deleted]] |> |> __ |> R-help@r-project.org mailing list |> https://stat.ethz.ch/mailman/listinfo/r-help |> PLEASE do read the posting guide http://www.R-project.org/posting-gui

Re: [R] strip.custom() with more than one conditioning variable

2012-11-16 Thread Patrick Connolly
d helped me get done what I was trying to do. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_ Average minds discuss events (:_~*~_:) Small minds discuss people (_)-(_)

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