Re: [R] Help manipulating 23andme data in R - reproducing relationship results

2015-05-17 Thread Lyle Warren
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Re: [R] Comparing 2 different files in R

2015-05-17 Thread Lyle Warren
Thanks Ben! On 17 May 2015 at 23:14, Ben Tupper wrote: > Hi, > > On May 17, 2015, at 6:56 AM, Lyle Warren wrote: > > > Thanks and sorry for being light on detail. > > > > I have multiple files of raw human genome SNP data. Very large - the > > comp

Re: [R] Comparing 2 different files in R

2015-05-17 Thread Lyle Warren
Thanks and sorry for being light on detail. I have multiple files of raw human genome SNP data. Very large - the compressed zip files are about 8mb large. On 17 May 2015 at 20:53, John Kane wrote: > Probably but since you have not told us anything about what you are doing > it is difficult to

[R] Comparing 2 different files in R

2015-05-17 Thread Lyle Warren
Hi, I have multiple files that I want to compare in R. They contain SNP data with genotype in the 4th column, which is what I want to compare. Is there any easy way to do this? [[alternative HTML version deleted]] __ R-help@r-project.org maili

[R] Help manipulating 23andme data in R - reproducing relationship results

2015-05-17 Thread Lyle Warren
Hi, I'm trying to replicate 23andMe's parentage test results within R, using the 23andme raw data. Does anyone know a simple way to do this? I have read the data with gwascat and it seems to be in there fine. Thanks for any help you can give! Cheers, Lyle [[alternative HTML version del

Re: [R] How am i able to create Box plots of a factor (weight) separated by other factors (breed)?

2015-03-15 Thread Lyle Warren
Thanks very much everybody - I think i've got it now! On 15 March 2015 at 23:58, John Kane wrote: > Oops missed the links. Once more... > https://github.com/hadley/devtools/wiki/Reproducibility > > http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example > http://x

[R] How am i able to create Box plots of a factor (weight) separated by other factors (breed)?

2015-03-14 Thread Lyle Warren
> > > I have data with columns for animal ID, breed, and weight. > > I'd like to create a box plot of weight, separated by breed (there are 4 > breeds). > > Any ideas? > > Here's a sample of the data (there are 100 rows): > > id weight breed > 1 453 brahman > 2 527 brahman