Thanks Jeff, Bert! You are right - definitely out of my skill area.. I've no found some help on the bioconductor mailing list.
On 18 May 2015 at 03:04, Bert Gunter <gunter.ber...@gene.com> wrote: > (No response necessary) > > What struck me about this post was the apparent mismatch: the OP > seemed not to have a clue where to begin. Maybe he somehow has been > assigned or chose a task for which his skills and background are > inadequate. This is not really a criticism: if someone told me to make > a dining room set, my reply would be: "Either find someone else or see > you in about a year after which I may have learned enough to attempt > the task. " > > So maybe the OP should give up looking for internet advice altogether > and find someone local to work with? > > And, of course, apologies if I have misinterpreted. > > Cheers, > Bert > > > > Bert Gunter > Genentech Nonclinical Biostatistics > (650) 467-7374 > > "Data is not information. Information is not knowledge. And knowledge > is certainly not wisdom." > Clifford Stoll > > > > > On Sun, May 17, 2015 at 9:52 AM, Jeff Newmiller > <jdnew...@dcn.davis.ca.us> wrote: > > This is a very domain-specific question (genetic data analysis), not so > much a question about how to use R, so does not seem on topic here. I also > suspect that the company 23andme may use some proprietary algorithms, so > "replicating their results" could be a tall order. > > > > You might start with the CRAN "Statistical Genetics" task view, and a > textbook on the subject. The Bioconductor project may also be a useful > resource. > > > --------------------------------------------------------------------------- > > Jeff Newmiller The ..... ..... Go > Live... > > DCN:<jdnew...@dcn.davis.ca.us> Basics: ##.#. ##.#. Live > Go... > > Live: OO#.. Dead: OO#.. Playing > > Research Engineer (Solar/Batteries O.O#. #.O#. with > > /Software/Embedded Controllers) .OO#. .OO#. > rocks...1k > > > --------------------------------------------------------------------------- > > Sent from my phone. Please excuse my brevity. > > > > On May 16, 2015 6:53:46 AM PDT, Lyle Warren <lyl...@gmail.com> wrote: > >>Hi, > >> > >>I'm trying to replicate 23andMe's parentage test results within R, > >>using > >>the 23andme raw data. Does anyone know a simple way to do this? I have > >>read > >>the data with gwascat and it seems to be in there fine. > >> > >>Thanks for any help you can give! > >> > >>Cheers, > >> > >>Lyle > >> > >> [[alternative HTML version deleted]] > >> > >>______________________________________________ > >>R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > >>https://stat.ethz.ch/mailman/listinfo/r-help > >>PLEASE do read the posting guide > >>http://www.R-project.org/posting-guide.html > >>and provide commented, minimal, self-contained, reproducible code. > > > > ______________________________________________ > > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
