methods base
Any suggestions as to how I might track this down?
Best,
Jim
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Department of Human Genetics
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Ann Arbor MI 48109-5618
734-615-7826
/www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826
*
tp://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826
***
g else to the file at that point.
You could also use writeLines(), but that is likely too low-level for
your needs.
Best,
Jim
Thanks,
Laura
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PLEA
code.
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University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826
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_________
d to
allow one to query any DBMS. Since RMySQL is MySQL-specific, it may be
more efficient. Anyway, why don't you just try it and see?
Best,
Jim
Best,
Ralf
On Wed, Jun 23, 2010 at 4:36 PM, James W. MacDonald
wrote:
Hi Ralf,
Ralf B wrote:
I am running a simple SQL SELECT statemen
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University of Mich
ne: 3371-4346
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Hi Assa,
First off, please don't cross-post. This is really an R-help question,
as it is about the R language rather than a specific BioC package.
Assa Yeroslaviz wrote:
dear all,
I have a problem with a masked object in a package we created here.
we make a package for a workflow of interna
hz.ch/mailman/listinfo/r-help
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Biostatistician
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University of Michigan
De
SE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 4810
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James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
tp://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826
***
ect you already know):
https://stat.ethz.ch/pipermail/r-help/
Best
--
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826
**
Elec
-contained, reproducible code.
--
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826
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https
-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
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James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
posting guide
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PLEASE do read the posting guide
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Biostatistic
00
44 comps 45 comps 46 comps 47 comps 48 comps 49 comps 50
comps
X100 100 100 100 100 100 100
octane 100 100 100 100 100 100 100
51 comps 52 comps 53 comps
X100 100 10
ct.org mailing list
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Biostatistician
Douglas Lab
University of Michigan
Department of Human
at this row.names vector is
2. How I can refer to cases after creating a subset (e.g., in order to
exclude them).
Many thanks in advance,
Best,
Holger
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James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann
iling list
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and provide commented, minimal, self-contained, reproducible code.
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James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human
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James W. MacDonald, M.S.
Biost
Rowv=rowv, Colv=colv)
Best,
Jim
Many thanks,
Chrysanthi.
2009/7/8 James W. MacDonald <mailto:jmac...@med.umich.edu>>
Hi Chrysanthi,
Chrysanthi A. wrote:
Hi,
I am analysing gene expression data using the heatmap.2 function
in R and I
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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--
James W. MacDonald, M.S.
Biostatistician
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University of Michigan
Department of Human Gen
, minimal, self-contained, reproducible code.
--
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826
__
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more personal nature, so I'll let you get back to
tilting at windmills.
vQ
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James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
73
e 'print sprintf("%.1f", 0.15) . "\n";'
0.1
vQ
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s
mike
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James W. MacDonald, M.S.
Biostatistician
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producible code.
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James W. MacDonald, M.S.
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Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
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d i dont
want the dendogram. I am using the R version 2.8.0 (2008-10-20)".
Thanks,
Tanuja
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Biostatistician
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Ann Arbor MI 48109-5618
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valide -- a-t-il été installé < 2.0.0 ?
Could you please help me to solve this problem?
Regards
Damien
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Biostatistician
Douglas Lab
5912 Buhl
1241 E. Catherine St.
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Biostatistician
r_1.16.0 survival_2.34
annotate_1.16.1 xtable_1.5-2
[16] AnnotationDbi_1.0.6 RSQLite_0.6-4 DBI_0.2-4
graph_1.16.1Biobase_1.16.3
[21] GO_2.0.1
loaded via a namespace (and not attached):
[1] KernSmooth_2.22-22 RColorBrewer_1.0-2 cluster_1.11.9 grid_2.6.2
--
James W. MacDonald, M.
rom within R.
I was looking at the help for 'url' and I can see I can probably access
the information I need and display it in my own way, but can I somehow
just open the given url with my web browser of choice?
many thanks for any help,
Jose
--
James W. MacDonald, M.S.
Biostat
gives me
Usage:
hclust(d, method = "complete", members=NULL)
Thank you and sorry if I posted this in the wrong place. If I have, please
let me know and I will move it to the appropriate list.
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Biostatistician
Affymetrix and cDNA Microarray Core
Univ
Germany
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he clustering every time is not feasible.
Thanks, Joh
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PLEASE do read the posting guide
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and provide commented, minimal, self-contained, reproducible code.
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James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Microarray Core
University of Michiga
t;
You want your table name to be wrapped in []. In this case the query
should be
SELECT * FROM [nameclass$]
Best,
Jim
>
> [[alternative HTML version deleted]]
>
> __
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> https://stat.eth
======
>> \documentclass[a4paper]{article}
>>
>> \title{Sweave Example 1}
>> \author{Friedrich Leisch}
>>
>> \begin{document}
>>
>> \maketitle
>>
>> In this example we embed parts of the examples from the
>> \
@r-project.org mailing list
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
--
James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Mi
gt;> I am pretty new to R. I think it is showing me the entire p-value.
>>
>>
>>
>> --
>> View this message in context:
>> http://www.nabble.com/Calculating-the-t-test-for-each-row-tp15808716p15808716.html
>> Sent from the R help mailing list archive at Nabble.com.
>>
&g
t; ExpressionSet) instead
>
>
>
>
>
> Can someone suggest me how to use the new method AnnotatedDataFrame to create
> eSet?
>
>
>
>
>
> Thanks
>
>
>
> Manisha
>
>
>
>
>
>
> [[alternative HTML version deleted]]
>
> _
n unix. Does anyone have any idea on this?
>>
>> Thank you in advance,
>> Eleni
>>
>> [[alternative HTML version deleted]]
>>
>> __
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on halted
>
> I do have pdflatex, it's what I use all of the time. However, how do I
> point to it for this build process?
>
>> -Original Message-
>> From: James W. MacDonald [mailto:[EMAIL PROTECTED]
>> Sent: Monday, January 21, 2008 4:09 PM
>> To: Dor
rg mailing list
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
--
James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Microarr
>> 3. Does R language have a way for me to define which processor in a
>> cluster
>> I would
>>
>> like to execute a section of code upon, like in MPI?
>>
>>
>>
>> Please let me know some of these things, if you can help.
>>
>> Than
and all required dependencies.
Best,
Jim
>
> Duncan Murdoch
--
James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109
734-647-5623
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
--
org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
--
James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109
734-647-5623
table(textConnection(x), header=TRUE)
> x
>
> Any idea how to do this in R?
>
> Best regards,
> Lauri
>
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> PLEASE do read the postin
0/lib/R/library
> Please check your permissions or provide a different 'lib' parameter.
> Execution halted
>
> Any pointers?
>
--
James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Driv
start = list(c0 = 0,
> :
> number of iterations exceeded maximum of 50
> best regards.
> Sadeghian.
>
> __
>
>
>
> [[alternative HTML version deleted]]
>
> _____
ion has length > 1 and only the first element will be used
> 8: In if (x < 0) a <- -1 else a <- 1 :
> the condition has length > 1 and only the first element will be used
>
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>
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