Re: [R] aov + pairwise.t.test: only selected pairs

asonable answer can be extracted from a given body of data. > ~ John Tukey > > > -Oorspronkelijk bericht- > Van: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] > Namens Andreas Maunz > Verzonden: woensdag 11 juni 2014 10:02 > Aan: r-help@r-project.o

[R] multcomp: Contrasts for Tukey

I want to use the glht function. In the linfct argument, I provide my linear functions to be tested. I provide contrasts there, such as (for example) c("Group1 - Group2 = 0", "Group1 - Group3 = 0") to compare group no 1 against the other groups. I want to do Tukey's test in this fashion. Is it po

[R] aov + pairwise.t.test: only selected pairs

Hi, I have a 1-way anova result and want to do a post test. I want to do pairwise t-tests where the global variance is taken into account (i.e. a real post test on the anova result, not multiple simple t tests on the samples). I understand I should use pairwise.t.test() for that. However, it doe

[R] Heatmap with mouseover

Dear all, what is the recommended way to create heatmaps (or plots in general) with mouseover-effect in R, so that I can embed it into a web app? Options I have found so far are a) rCharts or b) sendplot. What are your experiences and recommendations? Thanks Andreas [[alternative HTML ve

Re: [R] rgl snapshot on headless server

server that would do it (tried XF4VNC and TigerVNC). Thanks for your help anyway! Andreas On Sun, Sep 15, 2013 at 1:18 PM, Duncan Murdoch wrote: > On 13-09-15 6:02 AM, Andreas Maunz wrote: > >> The other write* options seem to limited to me. I am looking for a way >> to obtain

Re: [R] rgl snapshot on headless server

Sane for plot3d(), for example. Please help, if you can, it would be quite important to have this functionality Thanks Andreas On Wed, Sep 11, 2013 at 6:19 PM, Duncan Murdoch wrote: > On 11/09/2013 11:44 AM, Andreas Maunz wrote: > >> I am running Xvfb now with >> >> -fbd

Re: [R] rgl snapshot on headless server

file format? Thanks Andreas On Tue, Sep 10, 2013 at 6:38 PM, Duncan Murdoch wrote: > On 10/09/2013 10:58 AM, Andreas Maunz wrote: > >> Hi all, >> >> I have a shiny app, in which I want to use rgl's snapshot function. I am >> running Xvfb on my server so that

[R] rgl snapshot on headless server

Hi all, I have a shiny app, in which I want to use rgl's snapshot function. I am running Xvfb on my server so that rgl works. I start my shiny app as follows: echo "Checking for Xvfb..." pgrep -U username Xvfb > /dev/null 2>&1 if [ "$?" -gt 0 ]; then echo "Starting Xvfb..." Xvfb :7 -screen 0

[R] [Fwd: Re: Fatal error: you must specify '--save', '--no-save' or '--vanilla']

2008 09:08:30 -0500 From: Duncan Murdoch <[EMAIL PROTECTED]> User-Agent: Thunderbird 2.0.0.12 (Windows/20080213) MIME-Version: 1.0 To: Andreas Maunz <[EMAIL PROTECTED]> Subject: Re: [R] Fatal error: you must specify '--save','--no-save' or '--vanilla

Re: [R] Fatal error: you must specify '--save', '--no-save' or '--vanilla'

Uwe Ligges wrote: > Andreas Maunz wrote: >> Hi, I get the above error when starting my program with rake (ruby >> make) instead of manual startup (which works as expected). >> It happens on R initialization with "REmbeddedPostgres --gui=none >> --silent" as

[R] Fatal error: you must specify '--save', '--no-save' or '--vanilla'

Hi, I get the above error when starting my program with rake (ruby make) instead of manual startup (which works as expected). It happens on R initialization with "REmbeddedPostgres --gui=none --silent" as arguments (this is part of my way of embedding R in a C application using libR.so). Any hel

[R] kernlab and gram matrix

se") where x is the 1xn R-matrix containing kernel values between the instance to be predicted and my training points. This won't work: Error in as.matrix(Z) : object "Z" not found. I'm using the current CRAN version of kernlab. Any help by kernlab users who had a similar tas