[R] Read output:

Dear r-usersl, I don't understand this comment: > gambang <- read.csv("G:/A_backup 11 mei 2015/DATA (D)/1 Universiti Malaysia Pahang/ISM-3 2016 UM/Data/Hourly Rainfall/gambang2.csv",header=TRUE) Error in file(file, "rt") : cannot open the connection In addition: Warning message: In file(file, "rt

Re: [R] Fwd: Help: malloc/free deadlock in unsafe signal handler 'Rf_onsigusr1'

The handlers for SIGUSR1 and SIGUSR2 are really intended as an emergency break, not for ordinary programming. These could be rewritten to be safer but that would make them less immediate. Followups would be more appropriate on R-devel. Best, luke On Mon, 1 Aug 2016, Ming Li wrote: Hi all, I

Re: [R] Climate data in R

The rnoaa package has the function ncdc_stations which can be used to search for stations in a region. You could use that giving it an extent around the coordinates that you are interested in (add and subtract a small amount from the coordinates), then pass the results from that function (possibly

Re: [R] about netcdf files

Thanks, Roy. I will do a search. In addition, how to look at spatial patterns from this netcdf file? Thanks again. On Mon, Aug 1, 2016 at 11:46 AM, Roy Mendelssohn - NOAA Federal < roy.mendelss...@noaa.gov> wrote: > Hi Lily: > > If you download the vignette to my xtractomatic package ( > http://

Re: [R] about netcdf files

Hi Lily: If you download the vignette to my xtractomatic package (http://coastwatch.pfeg.noaa.gov/xtracto/index.html) there are any number of examples using ggplot2 to make maps from netcdf data, HTH, -Roy > On Aug 1, 2016, at 10:35 AM, lily li wrote: > > Hi all, > > I can read the data,

Re: [R] about netcdf files

Hi all, I can read the data, but how to plot it using ggplot or something? In this case, x-axis should be longitude, and y-axis should be latitude. I tried to plot using raster function, but the x and y axes are from 0 to 1. Thanks again. The code is like this: pre1 = nc_open('sample_precip_daily

Re: [R] what happened to inside-r? [possibly OT]

Microsoft's version of CRAN (called of course, MRAN) has hyperlinked listings of packages at https://mran.microsoft.com/packages/ and Task Views at https://mran.microsoft.com/taskview/ DataCamp.com has a search engine for functions in CRAN and BioConductor (11095 packages) at http://www.rdocum

Re: [R] what happened to inside-r? [possibly OT]

If I prepend with "R" and an R function name in a Google search I generally see a link to a manual page at https://stat.ethz.ch/R-manual/R-devel/library/base/html/ David Sent from my iPhone > On Aug 1, 2016, at 8:04 AM, Christopher W Ryan wrote: > > No, not off the grid. I just don't follow

Re: [R] what happened to inside-r? [possibly OT]

"When giants move, they don't move lightly" Presumably, Revolution's portfolio of web-domains got assimilated and redirected to the corporate homepage. There are valid concerns that might explain such a move. You might as some of the Revolution/Microsoft about the possibility of a resurrection

[R] Ways to understand C code (like debug function)

Hi I need some advice. Note: I do not know anything from C apart from my 2 days of research. I am currently trying to make meaning of the modelmatrix function (written in C) and called from R function model.matrix() via .External2. In trying to view the source code (in R) for model.matrix(), I h

Re: [R] what happened to inside-r? [possibly OT]

No, not off the grid. I just don't follow developments with Revolution or with Microsoft. I was merely lamenting that inside-r URLs, that used to get me quickly to the R help pages (even if I was at a computer that did not have R), now re-direct to the corporate MRAN homepage, with the help pages

Re: [R] type of objects in last session

Hi Long time ago I (with some help from R help list) made following function, which is maybe less comprehensive as ls.str but I find it quite handy. ls.objects <- function (pos = 1, pattern, order.by) { napply <- function(names, fn) sapply(names, function(x) fn(get(x, pos = pos)))

[R] Climate data in R

Dear all, I have a set of coordinates. Is it possible to extract climate data (temperature and precipitation) by coordinates using the R packages such as rnoaa? For example; out <- ncdc(datasetid='ANNUAL', stationid='GHCND:USW00014895', datatypeid='TEMP') But instead of stationid can I pass a l

Re: [R] type of objects in last session

That's what happens when I answer too fast... Sorry for that. Next time I'll read more carefully! Ivan -- Ivan Calandra, PhD Scientific Mediator University of Reims Champagne-Ardenne GEGENAA - EA 3795 CREA - 2 esplanade Roland Garros 51100 Reims, France +33(0)3 26 77 36 89 ivan.calan...@univ-re

Re: [R] type of objects in last session

On 01/08/2016 9:28 AM, Marco Silva wrote: Sometimes I comeback with a session months later. I would like to know the type of variables I have in. So I tried: sapply(ls(), typeof) ago_ts ago_ts.1 ago_ts.2annualy conn "character""character""chara

Re: [R] type of objects in last session

Maybe "mode" or "class" instead of "typeof"? Ivan -- Ivan Calandra, PhD Scientific Mediator University of Reims Champagne-Ardenne GEGENAA - EA 3795 CREA - 2 esplanade Roland Garros 51100 Reims, France +33(0)3 26 77 36 89 ivan.calan...@univ-reims.fr -- https://www.researchgate.net/profile/Ivan_Ca

[R] type of objects in last session

Sometimes I comeback with a session months later. I would like to know the type of variables I have in. So I tried: > sapply(ls(), typeof) ago_ts ago_ts.1 ago_ts.2annualy conn "character""character""character""character""character"

Re: [R] Reduce woes

That seems like sage advise :) Thanks Stefan On 29 July 2016 at 22:06, Jeff Newmiller wrote: > Having experienced some frustration myself when I first started with R > many years ago, I can relate to your apparent frustration. However, if you > would like to succeed in using R I strongly recom

Re: [R] funnel plot asymmetry

The 'meta' and 'metafor' packages provide this. See also the meta-analysis task view: https://cran.r-project.org/web/views/MetaAnalysis.html (especially: "Investigating small study bias"). Best, Wolfgang -- Wolfgang Viechtbauer, Ph.D., Statistician | Department of Psychiatry and Neuropsych

[R] funnel plot asymmetry

Hi, I am conducting a meta analysis of continuous data and I cant find the code to curry out Egger’s test, for testing the funnel plot asymmetry. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and mor

Re: [R] Repeat matrices

Not sure it would be any smarter, but what about: a <- c(5.78, 5.79,5.86) n <- 10 matrix(rep(a,each=n), nrow=n) That way, it would be easy to build a function with 'a' and 'n' as arguments. HTH, Ivan -- Ivan Calandra, PhD Scientific Mediator University of Reims Champagne-Ardenne GEGENAA - EA

Re: [R] cpquery problem

Hi Ross, On 31 July 2016 at 09:11, Ross Chapman wrote: > I have tried running the cpquery in the debug mode, and found that it > typically returns the following for instances where the conditional > probability is returned as 0: > >> event matches 0 samples out of 0 (p = 0) > > Am I right in

[R] Repeat matrices

Dear r-users, I have a set of numbers that I would like to repeat for let say 10 times and each number is repeated by vertically. I tried this: a <- c(5.78, 5.79,5.86) tran_a <- t(matrix(rep.int(a, 10),3)) dput(tran_a) structure(c(5.78, 5.78, 5.78, 5.78, 5.78, 5.78, 5.78, 5.78, 5.78, 5.78, 5.7