Most of the data sets I'm dealing with exhibit a time trend.
We would like to get rid of the time trend.
The plot shows in some cases a monotonic increase of the dependent variable
with time. This is the easiest case.
In some other cases the plot shows a time trend where the dependent variable
chan
Hi Sir
I am new user of 'cluster' and 'amap' packages for hierarchical clustering.
I want to find the optimum number of clusters described by Mojena (1977)
'Hierarchical
grouping methods and stopping rules: An evaluation' The Computer
Journal, 20(4).
I did not find the such function for optimal
Rob Hodgkinson wrote:
> Forgive me, I do not yet use R nor is it (yet) installed on my machine.
>
> I just need an answer to whether (and how ?) R is able to do Ordinary Least
> Squares (OLS) Regression with the requirement that the regressed line must
> pass through the origin.
>
>
When you ent
Hi, you may look here http://www.ats.ucla.edu/stat/examples/asa/ to find an
answer to your question. Basically you have to overlay one graph with the
points (lines) that you want to add. Otherwise, R replaces the old graph by
the new and does not add it as far as I know.
Cheers,
Daniel
-
I have created some slides on the Bowl Championship series data for my
class. Copies of just that part are available in
http://www.stat.wisc.edu/~bates/BCS.zip
Two interesting things about the analysis are that a parallel
coordinate plot shows the differences in agreement quite clearly and
that a
On 10/29/07, Shubha Vishwanath Karanth <[EMAIL PROTECTED]> wrote:
> Hi R,
> Does 'savePlot' will not work in the batch mode? I get the below error:
Yes. As the error message says you can only copy from the Windows
device with savePlot. However, you can directly create pdf (see ?pdf)
or PostScr
Forgive me, I do not yet use R nor is it (yet) installed on my machine.
I just need an answer to whether (and how ?) R is able to do Ordinary Least
Squares (OLS) Regression with the requirement that the regressed line must
pass through the origin.
Thank you, Rob.
[[alternative HTML versi
Dear j,
I would probably use acf(). Also, set (or make sure you understand) the
parameter 'lag.max'.
See:
>?acf
Sincerely,
KeithC. [U.S]
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide
On 10/26/07, John Thaden <[EMAIL PROTECTED]> wrote:
>
> Michael,
>Where can we read you document that includes "various ideas
>going far beyond simply embedding R"? What about Julian's
>opinion that Tinn-R is more stable and loads more quickly
>than jEdit? Can that be true in a Wi
raymond chiruka wrote:
> hie
> when i use plot.survfit to plot more than one graph why I only see the last
> graph how do i see the other graphs.for example
>
> n=20
> n1=n/2
> n2=n/4
> a11=4;a12=4 ;a21=4 ;a22=4
> t1<-array(1,c(n1))
Dear R-user:
Could you please tell me how to extract gradient and Hessian from the following
example model of lmer2 package?
(fm1 <- lmer(Reaction ~ Days + (Days|Subject), sleepstudy))
I would really appreciate your kind help.
Best,
Sattar
oops i see i was missing the "packages" directory which is in the DMG...
everything installs fine from there.
incidentally i was recieving a message something like "this package is
already installed" sometimes from the main installer.
cheers
Jim
JimBarritt wrote:
>
> Hi Don,
>
> I am havin
Hi Folks,
I wonderif someone who is familiar with the details
of vglm in the VGAM package can assist me. I'm new
to using it, and there doesn;t seem much in the
documentation that's relevant to the question below.
Say I have a vector x of 0/1 responses and another
vector y of 0/1 responses, these
Hi Don,
I am having exactly the same issue - would you mind providing some details
about how you were able to run each of the packages seperately on here ?
cheers
Jim
Don Kalar wrote:
>
> Mark,
>
> Thanks for your suggestions - I was able to install R by running each
> of the individual pac
I'm not sure what you mean. You should provide an example (i.e. some code).
Julian
Gang Chen wrote:
> This must be very simple, but I'm stuck. I have a command line in R
> defined as a variable of a string of characters. How can I convert
> the variable so that I can execute it in R?
>
> Re
I do this all the time. Simply,
a) Open your pdf file using the pdf function.
b) Do a bunch of plots. Because now the pdf file is your active device,
every time you call a new plot you should get a new page. You can also
use par(mfrow=...) to split the page (the same way you do it on a
window),
...
Of course if arg1 and arg2 are expressions (as characters strings) that
themselves contain commas, then this won't work. So the poster does, indeed,
seem to have achieved near obfuscation optimality.
Of course this is yet another case where Lumley's principle (at least I
think it's his) holds
Here is a way of using parse and eval that was previously mentioned.
It works with constants, variable names or expressions:
> myFunc <- function(arg1, arg2) arg1+arg2
>
> x <- 20
> y <- 10
> myFunc(x,y)
[1] 30
>
> tempstr <- 'x,y'
> # split the string
> args <- strsplit(tempstr, ',')
> # parse an
Hi -
you can split the string using strsplit().
if your function uses Argument1 as a string, then you're all set. If
that's not the case then you can get() the object.
>myfunc <- function(arg1, arg2) {
+ arg1 <- get(arg1)
+ arg2 <- get(arg2)
...
}
>args <- "argument1,argument2" # easier with n
Thanks for the help.
One case is like this: With function MyFunc(Argument1,
Argument2, ...) I have the first two arguments defined as one
variable "tempstr", a string of characters, like
tempstr <- "Argument1, Argument2"
The question is how I can feed tempstr into MyFunc to make it
executa
Can you provide an example of your input and what you expect the
output to be. You can always use 'as.numeric'.
On 10/29/07, Gang Chen <[EMAIL PROTECTED]> wrote:
> This must be very simple, but I'm stuck. I have a command line in R
> defined as a variable of a string of characters. How can I conv
I don't think you ever want to do it this way. vcov() gives what is
needed. But, if you perform matrix operations represented algebraically
as t(x) %*% x, then use crossprod(x) and NOT t(x) %*% x
See the paper at the link below for reasons why
@ARTICLE{Rnews:Bates:2004,
author = {Douglas Bates}
Gang Chen wrote:
> This must be very simple, but I'm stuck. I have a command line in R
> defined as a variable of a string of characters. How can I convert
> the variable so that I can execute it in R?
>
>
First parse() it then eval() the result
--
O__ Peter Dalgaard Ø
If X is your p-1 variable matrix (with the first column vector being 1s),
i.e., nrow(X)=n and ncol(X)=p
then
MSE<-summary(lm(Y~X[2]+X[3] + ...X[P-1]))$s^2
and your coefficient (co)variance matrix is
MSE*ginv(t(X)%*%X)
Best,
Alex
On 10/29/07, Peter B. Mandeville <[EMAIL PROTECTED]> wrote:
>
>
This must be very simple, but I'm stuck. I have a command line in R
defined as a variable of a string of characters. How can I convert
the variable so that I can execute it in R?
Really appreciate any help,
Gang
__
R-help@r-project.org mailing list
Suppose I have a mixed-effects model where yij is the jth sample for
the ith subject:
yij= beta0 + beta1(age) + beta2(age^2) + beta3(age^3) + beta4(IQ) +
beta5(IQ^2) + beta6(age*IQ) + beta7(age^2*IQ) + beta8(age^3 *IQ)
+random intercepti + eij
In R how can I get an F test against the nu
I found myself the reason of the failure.
The last row of the matrix input to lm contains all NAs
for some reason that I'm going to investigate.
I apologize for my previous message. Please, discard it.
Sincerely,
--
Maura E.M
[[alternative HTML version deleted]]
___
Indeed it does. The thing that confused me was that lm worked with the odd
data names but lm.boot did not. Thanks.
Tom
-Original Message-
From: Peter Dalgaard [mailto:[EMAIL PROTECTED]
Sent: Monday, October 29, 2007 4:15 PM
To: Tom La Bone
Cc: r-help@r-project.org
Subject: Re: [R] lm.boo
On Mon, 2007-10-29 at 12:36 -0700, Tom.O wrote:
> Hi
> Does anyone know if its possible to add pagebreaks to an pdf through an R
> command? I'm running a loop where each session exports an pdf graph. Each
> image becomes a separate file, but I would like to have them in the same
> document but on
Tom La Bone wrote:
> When I run this calculation
>
> library(ISwR)
> library(simple.boot)
> data(thuesen)
> fit <- lm(thuesen$short.velocity~thuesen$blood.glucose)
> summary(fit)
> fit.sb <- lm.boot(fit,R=1000,rows=F)
> summary(fit.sb)
>
> I get the following error from the lm.boot ro
Hi R,
Does 'savePlot' will not work in the batch mode? I get the below error:
> x=c(1,2,3,4,5,6,7)
> hist(x)
> savePlot("D:\\Test\\histo",type="jpeg")
Error in savePlot("D:\\Test\\histo", type = "jpeg") :
can only copy from 'windows' devices
Execution halted
The same
Hi
Does anyone know if its possible to add pagebreaks to an pdf through an R
command? I'm running a loop where each session exports an pdf graph. Each
image becomes a separate file, but I would like to have them in the same
document but on separate pages.
Does anyone know a solution or workarou
Dear Peter,
See ?vcov. You could have discovered this via
help.search("covariance").
I hope this helps,
John
On Mon, 29 Oct 2007 11:30:11 -0600
"Peter B. Mandeville" <[EMAIL PROTECTED]> wrote:
> Greetings,
>
>
>
> Cohen, Cohen, West, and Aiken 2003 (Applied Multiple
> Regression-Correlatio
When I run this calculation
library(ISwR)
library(simple.boot)
data(thuesen)
fit <- lm(thuesen$short.velocity~thuesen$blood.glucose)
summary(fit)
fit.sb <- lm.boot(fit,R=1000,rows=F)
summary(fit.sb)
I get the following error from the lm.boot routine:
newdata' had 100 rows but va
Dear Gustaf,
I can think of two reasons why the two tests can disagree.
First, the t-test from the summary() output is based on the covariance
matrix of the coefficients, while the F-test in the anova() output is
based of fitting alternative models. The two are not in general the
same.
Second,
Peter B. Mandeville wrote:
> Greetings,
>
>
>
> Cohen, Cohen, West, and Aiken 2003 (Applied Multiple Regression-Correlation
> Analysis for the Behavioral Sciences, Third Edition) on page 273 state the
> covariance matrix of the regression coefficients is provided by standard
> programs for multip
But typically what you are looking for is the "number of operations"
per unit time. In the case of R, what you would probably be doing is
to monitor the time that it takes to go through a number of scenarios
and then divide this number by the CPU time and you will get "number
of operations per CPU
That is great, bitmap works.
Now I have the problem that the gray levels are too bright. I tried using
col="black" in the hist function, but that only fills the bars. The tick
marks etc are all in a fainting gray... Any idea on how to get those
darker???
Thanks again,
Bernd
|-Original Messa
You can use the gamm function (in the mgcv package) to fit generalized
additive mixed models and specify your covariance structure.
Julian
gallon li wrote:
> I used gam for data analysis a lot. Is it possible to use gam to analyze
> longitudinal data? I mean, besides the working independence ass
?vcov
You can use vcov(lm.obj) to extract the covariance matrix, where "lm.obj" is
your fitted object from lm().
Ravi.
---
Ravi Varadhan, Ph.D.
Assistant Professor, The Center on Aging and Health
Division of Geri
See ?vcov .
On Mon, 29 Oct 2007, Peter B. Mandeville wrote:
> Greetings,
>
>
>
> Cohen, Cohen, West, and Aiken 2003 (Applied Multiple Regression-Correlation
> Analysis for the Behavioral Sciences, Third Edition) on page 273 state the
> covariance matrix of the regression coefficients is provided
Greetings,
Cohen, Cohen, West, and Aiken 2003 (Applied Multiple Regression-Correlation
Analysis for the Behavioral Sciences, Third Edition) on page 273 state the
covariance matrix of the regression coefficients is provided by standard
programs for multiple regression, including SAS, SPSS, and S
Greetings,
On page 273, Cohen, Cohen, West, and Aiken (Applied Multiple
Regression/Correlation Analysis for the Behavioral Sciences, Third Edition",
state that the covariance matrix of the regression coefficients is provided by
standard programs for multiple regression, including SAS, SPSS, an
uups, ok, I see, thanks
Tim Calkins wrote:
> check the dimensions of your X and P matrices:
>
>> dim(X)
> [1] 21 9
>> dim(P)
> [1] 9 21
>
> what you see is that the final row is *named* 26. It's actually row 21.
>
> cheers,
>
> On 10/29/07, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote:
>> Hi A
But doesn't it suffice to replace png() by bitmap()?
b
On Oct 29, 2007, at 12:47 PM, Duncan Murdoch wrote:
> On 10/29/2007 12:06 PM, Bernd Jagla wrote:
>> Hi there,
>>
>>
>>
>> I want to run an R script on a cluster with qsub. Obviously I
>> don't want to
>> display any X window, but I want use
Hello!
I have a problem making a new variabel in a dataframe that consists of a time
difference.
It seems that the new variable gets into the dataframe but I cant look at it
anymoore.
Here is what hapens.
> tdiff<- difftime(Kontrolltid, Starttid, units="auto")> tdiffTime differences
> i
Greetings,
Cohen, Cohen, West, and Aiken 2003 (Applied Multiple Regression-Correlation
Analysis for the Behavioral Sciences, Third Edition) on page 273 state the
covariance matrix of the regression coefficients is provided by standard
programs for multiple regression, including SAS, SPSS, and S
I am interested in generating simulated data for demonstrating sampling
distribution of the mean difference between non-independent paired measures. Is
there an elegant way do generate non-independent data sets?
Thanks ../Murli
[[alternative HTML version deleted]]
___
Thanks for the comments/suggestions.
R is running smoothly on the head node with a small sample script.
We are using the grid engine qsub system. There is no -X option available
for that one.
Can't I just disable the X11? There is such an option in Matlab, so I
thought R would have something sim
Henrique Dallazuanna wrote:
>If I understand your question:
>
>df <- data.frame(x=rnorm(20), y=rnorm(20), z=rnorm(20))
>df <- as.matrix(df)
>dim(df)
>dim(df) <- c(10,6)
>dim(df) <- c(5,12)
>
>On 29/10/2007, Weiwei Shi <[EMAIL PROTECTED]> wrote:
>
>
>>hi,
>>
>>if I have 20 x 3 data.frame, how to
Weiwei Shi wrote:
> Thanks.
>
> but I need to make it into a more general case instead of that example
>
>
How about this?
> reshape(data.frame(df,expand.grid(id=1:10,time=1:2)), direction="wide")
id x.1 y.1z.1 x.2y.2z.2
1 1 -1.33527134 -0.3
On 10/29/2007 12:06 PM, Bernd Jagla wrote:
> Hi there,
>
>
>
> I want to run an R script on a cluster with qsub. Obviously I don't want to
> display any X window, but I want use png() or something else to write out
> images.
>
> Unfortunately I get the following error message:
>
>
>
>> png
Perhaps:
SplitByRow <- function(data, rows){
coln <- colnames(data)
df <- as.matrix(data)
dim(df) <- c(dim(df)[1]/rows, dim(df)[2]*rows)
colnames(df) <- rep(coln, rows)
return(df)
}
SplitByRow(df, 2)
On 29/10/2007, Weiwei Shi <[EMAIL PROTECTED]> wrote:
>
> Thanks.
>
> but I need to make
Hi Bernd,
A little speculation / uninformed input on my part, but I'm guessing
that the R on your nodes is compiled without X11 support, probably
because the cluster nodes have X11, but not the X11 header files
required by R when it is built. Probably
> capabilities()[["X11"]]
[1] FALSE
One solu
R-users,
Background: I took roadside samples of avian species richness and I
would like to model the relationship between species richness and
habitat around my 500 + sample locations (in a file called ROADSIDE).
However, one criticism is that roadside habitats do not represent
habitats through
Hi,
I have been struggling with this problem for some time now. Internet,
books haven't been able to help me.
## I have factorial design with counts (fruits) as response variable.
> str(stubb)
'data.frame': 334 obs. of 5 variables:
$ id : int 6 23 24 25 26 27 28 29 31 34 ...
$ infl.treat : Facto
Thanks.
but I need to make it into a more general case instead of that example
On 10/29/07, Henrique Dallazuanna <[EMAIL PROTECTED]> wrote:
> If I understand your question:
>
> df <- data.frame(x=rnorm(20), y=rnorm(20), z=rnorm(20))
> df <- as.matrix(df)
> dim(df)
> dim(df) <- c(10,6)
> dim(df)
Tom,
Allow me to give a few comments.
x <- c(x=(rep(33:55,1)))
#Is a very uggly way to write
x <- 33:55
#This (untested) code will probably generate a smooth plot too. Maybe
it's not the plot that you intended to create. I'm just guessing as I
can not reproduce your code (because I don't have
If I understand your question:
df <- data.frame(x=rnorm(20), y=rnorm(20), z=rnorm(20))
df <- as.matrix(df)
dim(df)
dim(df) <- c(10,6)
dim(df) <- c(5,12)
On 29/10/2007, Weiwei Shi <[EMAIL PROTECTED]> wrote:
>
> hi,
>
> if I have 20 x 3 data.frame, how to split it into
> 10 x 6 (moving the lower pa
Sorry, I didn't think carefully about your question on my first reply, so
please ignore it.
Chapter 9 in Morris and Doak (2002) cover vital rate elasticities and
sensitivities (see Box 9.1 for Matlab code
http://www.sinauer.com/PVA/vitalsens.m). Simon, thanks for posting your
code, I will add
If min and max are two vectors with values on the y-axis and x is a vector of
the values on the x-axis, then you need.
x <- 1:50
z <- matrix(rnorm(100), ncol = 2)
mini <- apply(z, 1, min)
maxi <- apply(z, 1, max)
plot(x, maxi, ylim = range(c(mini, maxi)), type = "l")
lines(x, mini)
polygon(c(x, r
Hi there,
I want to run an R script on a cluster with qsub. Obviously I don't want to
display any X window, but I want use png() or something else to write out
images.
Unfortunately I get the following error message:
> png(filename = " ALL.png", width = 480, height = 480, pointsize = 12, b
Dear Tom,
I'm afraid that you're confusing the point-biserial correlation with the
biserial correlation. It's the latter that polyserial() in the polycor
package computes; the biserial correlation is a special case when the
(ordered) categorical variable has just two categories.
Generally, biser
hi,
if I have 20 x 3 data.frame, how to split it into
10 x 6 (moving the lower part of 10x3 to column)
or
5 x 12
thanks
--
Weiwei Shi, Ph.D
Research Scientist
GeneGO, Inc.
"Did you always know?"
"No, I did not. But I believed..."
---Matrix III
__
Dear Jonh,
there is probably an easier way, but i find this to give nice smooth
plots.
good luck with it.
### R-file
alive <- data$num - data$numdead
numdead <- data$numdead
temp <- data$temp
data.table <- cbind(numdead, alive)
points.graph <- data$alive/data$num
glm.mort<-glm(data.table ~
Hello, I would like to build a list through the following codes."know1" &
"know2" are some list obtained before. "know1" has the length of 50 (as for
i), "know2" has the lengh of 50 (as for i), know1[[i]] has the length of
1000, know2[[i]] has the length of 1132. I would like to get the list
"fina
t.test() does give effect sizes: that is, it gives the actual difference
in means, and a confidence interval for this difference.
If you want to standardize your effect sizes you will have to do this
yourself. This is because the customs for standardization are different
in different fields.
Hello again
With the poylgon function it's possible to plot shaded areas under a curve.
But somehow it connects the start and the endpoint of a line and fills whats
between them. I would actually like to set the boarders of the shading by two
min and max curves, but I failed.
i tried stl like:
On Sat, 27 Oct 2007, eugen pircalabelu wrote:
>
> As mentioned in the subject, my question regards more the methodological
> part that accompanies survey design and the statistical part that is
> involved. So, I have the following data:
You might get more helpful (or more authoritative) advice o
Dear R-ussers,
While looking for a way to calculate the association between a countinuous
and a binary variable,
i found a procedure called point biserial corralation.
Me, not being a mathematicion, i did my very best to understand what it
was all about, and then i found a easily understandable
Leandre Bassole <[EMAIL PROTECTED]> wrote:
> I am a new user of R. I am very familar to Stata, but few days ago I have
> decided to switch to R.
> But R langage is very difficult.I really want to know the best way to
> learn this famous and
> interesting software.
I agree with the suggest
On Sun, 28 Oct 2007, kevinchang wrote:
>
> Hi all,
>
> Since proc.time return three different kind of times (user, system and
> elapsed) , I am wondering which one is right for calculating flops.
Probably none of them. The 'user'+'system' time is the amount of CPU time
that can be blamed on R.
Hi,
You can use the par function to set the parameters of the plot to have
multiple plots in one output. Have something like par(mfrow=c(2,1)) before
your plot commands.
You could also write the the outputs to a ps, pdf or jpeg file (look for the
pdf, postscript and jpeg commands). That way the p
dear R
I have a list consisting of 20 matrices of dimensions (1600, 15).
Out of this list I plot median, max, min values in a timeplot, that works well
with the code at the end.
I would like to plot quartile ranges.'m not able to find a way to compute the
quantile for every time step.
Thanks
David,
You should probably have a look at the 'msm' package.
Best,
Peter.
-Oprindelig meddelelse-
Fra: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] På vegne af Doran, Harold
Sendt: 29. oktober 2007 13:46
Til: David Kaplan; [EMAIL PROTECTED]
Emne: Re: [R] Markov models
David
I think tran
On 29 October 2007 at 05:45, Metaxab wrote:
|
| Hello I have the following problem:
|
| I am trying to install the 'rgl' package by:
|
| sudo R
| install.packages('rgl',dependencies=TRUE)
|
|
| I get the following message
|
| checking for X... no
| configure: error: X11 not found but require
Thanks!!!
Sorry for not having checked that - just did not remember...
Thanks again,
Pedro
At 12:59 2007/10/29, you wrote:
>This has been reported several times already and has been fixed in
>R-2.6.0 patched.
>Uwe Ligges
>
>
>
>Pedro de Barros wrote:
>>Dear All,
>>I am trying to save a plot made
This has been reported several times already and has been fixed in
R-2.6.0 patched.
Uwe Ligges
Pedro de Barros wrote:
> Dear All,
>
> I am trying to save a plot made with ggplot as pdf.
>
> I just created the plot, then printed it to the default graphics
> device (screen). I then tried to cr
Pedro de Barros wrote:
>Dear All,
>
>I am trying to save a plot made with ggplot as pdf.
>
>I just created the plot, then printed it to the default graphics
>device (screen). I then tried to create a pdf file choosing (from the
>menus) File-Save As-PDF file. However, I get an error as
>Error: I
Oh PLEASE do look in the list archives: this has come up several times.
It does not happen in R-patched, and a simple workaround for 2.6.0 has
already been posted here.
On Mon, 29 Oct 2007, Pedro de Barros wrote:
> Dear All,
>
> I am trying to save a plot made with ggplot as pdf.
>
> I just crea
Do you have the X11 devel packages installed? You probably do not.
--elijah
On Mon, 29 Oct 2007, Metaxab wrote:
> Date: Mon, 29 Oct 2007 05:45:33 -0700 (PDT)
> From: Metaxab <[EMAIL PROTECTED]>
> To: r-help@r-project.org
> Subject: [R] Cannot install 'rgl'
>
>
> Hello I have the follo
David
I think transition probabilities can be estimated in numerous ways using
general statistical models. For example, i've estimated them using the
prop.table() function as well as through the use of logistic regression
via glm().
Harold
> -Original Message-
> From: [EMAIL PROTECTED
Hello I have the following problem:
I am trying to install the 'rgl' package by:
sudo R
install.packages('rgl',dependencies=TRUE)
I get the following message
checking for X... no
configure: error: X11 not found but required, configure aborted.
ERROR: configuration failed for package 'rgl'
**
osita k ezeh wrote:
>
> hello,
>
> please can anyone help me out. Am a new user of R
> program. Am having problem
> with this code below, not getting the expected
> results.
>
>
Did you not get my and Uwe's previous responses to your question?
Ben Bolker
--
View this message in conte
> Subject: [R] Cluster Analysis
>
> Dear all,
>
> I would like to know if I can do a hierarchical cluster analysis in R
> using my own similarity matrix and how. Thanks. Katia Freire.
Yes. ;)
Reading the help for dist() and hclust() should make the procedure for
doing this appear fairly str
Dear All,
I am trying to save a plot made with ggplot as pdf.
I just created the plot, then printed it to the default graphics
device (screen). I then tried to create a pdf file choosing (from the
menus) File-Save As-PDF file. However, I get an error as
Error: Invalid font type
In addition: Wa
Using the command R CMD INSTALL I finally succed the isnstallation of ade4
juste by using
ade4_1.4-3.tar.gz instead of ade4_1.4-5.tar.gz.
Many thanks again,
Faithfully Yours,
Souleymane N'Doye
> Date: Mon, 29 Oct 2007 08:22:21 +
> From: [EMAIL PROTECTED]
> To: [EMAIL PROTECTED]
> CC: [EMA
take a look at hclust()
Dieter
Katia Freire wrote:
> Dear all,
>
> I would like to know if I can do a hierarchical cluster analysis in R using
> my own similarity matrix and how. Thanks. Katia Freire.
>
>
> [[alternative HTML version deleted]]
>
> _
You got at least two answers on this yesterday. If you want more precise
answers, please tell us what your expected result is.
Uwe Ligges
osita k ezeh wrote:
> hello,
>
> please can anyone help me out. Am a new user of R
> program. Am having problem
> with this code below, not getting the expe
Tom.O wrote:
>Hi
>
>I am doing some correlation analysis where I graphically display the results
>by using image() and then exporting the results in a PDF. I also use the
>par(mfrow=c(2,2)) to fit 4 images on the same sheet. But I wonder if it
>possible to use the some methodology to export the 4
>
> My code contains following snippet: "xlsReadWrite::read.xls", this is
> because another package I load masks read.xls function and :: help me
> to select correct read.xls. I guessed this use of :: but I would
> really like to know what :: is and where can I read more about this
> function?
>
Sorry, I should have specified:
windows(height=y, width=x)
works for the general caseand specifying <<...width=x, height=y>>= to
Sweave works perfectly. Thank you!
Cheers
Rory
On 10/29/07, Prof Brian Ripley <[EMAIL PROTECTED]> wrote:
>
> On Mon, 29 Oct 2007, Rory Winston wrote:
>
> > Thank
Hi
I am doing some correlation analysis where I graphically display the results
by using image() and then exporting the results in a PDF. I also use the
par(mfrow=c(2,2)) to fit 4 images on the same sheet. But I wonder if it
possible to use the some methodology to export the 4 matrixes on a PDF w
On Mon, 29 Oct 2007, Rory Winston wrote:
> Thank you Brian! This seems to do what I want for a screen device, however,
The 'this' having been deleted from your reply ...!
> I am using this plot within Sweave, so the code in my orginal email is
> within a <<>>= block. If I place a call to windows
Thank you Brian! This seems to do what I want for a screen device, however,
I am using this plot within Sweave, so the code in my orginal email is
within a <<>>= block. If I place a call to windows() just before I print()
the lattice plot, then I get an access denied error when generating the TeX
f
Hi all,
Sorry for reposting, but I think my last request was a little confusing.
I am trying to keep my x windows open after I exit the R session, so
when I have produced a series of plots from R I would like to retain
the graphics as x windows after exiting with q(). This would be
particul
Dear Prof. Bates,
first let me say that I completely agree with your points and your
frustration at the SAS PROC MIXED sloppy terminology. To be honest
I've only used SAS PROC MIXED twice, and I really do prefer the
flexibility lme() and lmer().
Now regarding the term "unstructured variance-co
The 'base height and width of a lattice plot' are the dimensions of the
graphics device in use. You set those when you open the graphics device
(which you are using was unstated, as was your OS), and each device has
device-specific defaults. I'd suggest something like
windows(width=8, height=
Dear all,
I would like to know if I can do a hierarchical cluster analysis in R using
my own similarity matrix and how. Thanks. Katia Freire.
[[alternative HTML version deleted]]
__
R-help@r-project.org mailing list
https://stat.ethz.ch/
On Fri, 26 Oct 2007, Richard Saba wrote:
> Is anyone aware of a procedure to apply Newey-West corrections for
> autocorrelation to a SUR regression model? The SANDWICH package seems to be
> applicable only to LM or GLM models.
No, "sandwich" is applicable to any estimating function-based model,
p
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