Re: [Rd] [R] How to convert "c:\a\b" to "c:/a/b"

2005-07-04 Thread Spencer Graves
\Boxplot_missing_Tukey2.txt This has been tested (in this one example) under XEmacs / ESS and Rgui for R 2.1.1 patched. Thanks for your great support of the R project and through that making it much easier for people to learn and use improved statistical methods and to ad

Re: [Rd] evaluating variance functions in nlme

2005-07-27 Thread Spencer Graves
gh of what you are asking to say. If an answer might still be worth pursuing to you, I suggest you read the posting guide and submit a question following that model to r-help. spencer graves Nicholas Lewin-Koh wrote: > Hi, > I guess this is a final plea, and maybe t

[Rd] qbinom returns NaN

2005-11-23 Thread Spencer Graves
p, size, prob, lower.tail, log.p)) } I suspect that for the right person, it would likely be easy to fix this in the .Internal qbinom code. However, that's beyond my current R skill level. Thanks for all your efforts to make R what it is today. Best Wishes,

Re: [Rd] typo in `eurodist'

2005-12-08 Thread Spencer Graves
fer "gage", because it's more restrictive and therefore seems clearer to me. spencer graves Martin Maechler wrote: >>>>>>"Torsten" == Torsten Hothorn <[EMAIL PROTECTED]> >>>>>>on Thu, 8 Dec 2005 08:51:57 +0100 (CET)

Re: [Rd] nls profiling with algorithm="port" may violate bounds (PR#8508)

2006-01-20 Thread Spencer Graves
n an IBM T30 notebook computer. Thanks to all of the R Core team for all your hard work to make R what it is today, with these kinds of unpleasant surprises to rare. Best Wishes, spencer graves [EMAIL PROTECTED] wrote: > [posted to R-devel, no discussion: &g

Re: [Rd] nls profiling with algorithm="port" may violate bounds (PR#8508)

2006-01-21 Thread Spencer Graves
requirement to reply to my comment. Thanks again, spencer graves Ben Bolker wrote: > Spencer Graves pdf.com> writes: > > >>Hi, Ben, et al.: >> >>The issue Ben identified with confint(nls(... )) generates a hard >>failure for me. >

[Rd] Searching R Packages

2018-01-27 Thread Spencer Graves
might be interested. Thanks for your contributions to improving the lot of humanity through better statistical software.   Best Wishes,   Spencer Graves, PhD   Founder   EffectiveDefense.org   7300 W. 107th St. # 506   Overland Park, KS 66212

[Rd] help(pac=xxx) get data from CRAN?

2018-01-29 Thread Spencer Graves
something like, "Local newer than CRAN."   This occurred to me, because someone suggested I update the "sos" package to use CRAN to get package information for packages not already installed.  It's a great idea, but I'm not

[Rd] Draft proposal for Searching R Packages

2018-02-17 Thread Spencer Graves
ne is April 1.  This sounds like lots of time, except that the key thing that is missing in this draft proposal is principal investigator(s).  Without PI(s), it won't fly.       Thanks,   Spencer Graves, PhD   Founder   EffectivedDefense.org   7300 W. 107th St. # 506

Re: [Rd] R Bug: write.table for matrix of more than 2, 147, 483, 648 elements

2018-04-18 Thread Spencer Graves
On 2018-04-18 17:38, Steven McKinney wrote: Hi Colton, You could divide your write task into chunks that do not violate the 2^31-1 limit. write.table has an append argument (default FALSE). Figure out a row chunk size nri < nr such that nri * nc is under 2^31-1 and use write.table() to writ

Re: [Rd] Spam to R-* list posters

2018-04-19 Thread Spencer Graves
; would be converted to "mai...@example.com". The visitor would then click on the "..." and solve the CAPTCHA in order to obtain the full email address. One can also edit the pop-up code so that none of the address is visible.' (https://en.wikipedia.org/wiki/ReCAPTCHA)  

[Rd] svg ignores cex.axis in R3.5.1 on macOS

2018-08-31 Thread Spencer Graves
r, when I wrote that to an svg file and opened it in other applications (GIMP and Safari), the cex.axis request was ignored.  This also occurred inside RStudio on my Mac. It worked properly using R 3.2.1 under Windows 7.   Thanks,   Spencer Graves _

Re: [Rd] svg ignores cex.axis in R3.5.1 on macOS

2018-08-31 Thread Spencer Graves
On 2018-08-31 14:21, Spencer Graves wrote: Plots produced using svg in R 3.5.1 under macOS 10.13.6 ignores cex.axis=2.  Consider the following: > plot(1:2, cex.axis=2) > svg('svg_ignores_cex.axis.svg') > plot(1:2, cex.axis=2) > dev.off() > sessionInfo() R

Re: [Rd] svg ignores cex.axis in R3.5.1 on macOS

2018-09-06 Thread Spencer Graves
eave it alone.   If anyone wants me to try something further to add to this record, I will.  Otherwise, I'll wait:  If the problem recurs, I'll try reinstalling XQuartz again, as Professors Dalgaard and Ripley suggested.  And if I have another problem with svg and need further help

Re: [Rd] Stability and reliability of R (comment on Re: as.vector() broken on a matrix or array of type "list")

2018-09-26 Thread Spencer Graves
these articles could doubtless be improved by someone more knowledgeable than I.   Many thanks and kudos to Ross Ihaka, Bob Gentleman, Martin Maechler and the rest of the R Core team, who have managed this project so successfully for more than two decades now.   Spencer Graves -Don

[Rd] point size in svg

2019-06-19 Thread Spencer Graves
the font size is tiny.  I also tried: svg('cex-svg.svg', width=15, height=15, pointsize=24) cex. <- 5 plot(1:2, cex.axis=cex.) text(1:2, 1:2, c('as', 'DF'),   cex=cex.) dev.off()       What do I do to control the font size in svg?   Thanks,    

Re: [Rd] point size in svg

2019-06-23 Thread Spencer Graves
same results.   I will repost this to r-sig-mac R .   Thanks again to Peter and David.   Spencer Graves #  From the Windows system: sessionInfo() R version 3.5.2 (2018-12-20) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 7 x64 (build 7601) Service Pack 1 Matri

[Rd] R-Forge > GitHub?

2019-06-26 Thread Spencer Graves
ndly/7269490".  This says it was "Last active 2 years ago" but seems to be the most current advice I can find on this right now.  That looks complicated, but I assume it preserves the edit history on R-Forge. ???       Thanks,       Spencer Graves Forwarded Mes

Re: [Rd] R-Forge > GitHub?

2019-06-27 Thread Spencer Graves
  I could create a separate version of this package on GitHub, but all the history would be lost.   Thanks again,   Spencer Graves On 2019-06-26 10:35, Lionel Henry wrote: On 26 Jun 2019, at 17:25, Duncan Murdoch wrote: R-Forge is mirrored on Github; see https://github.com/r

Re: [Rd] R-Forge > GitHub?

2019-06-27 Thread Spencer Graves
he "+" button on github.com <http://github.com>�and select > "Import a repository". > 2. Pass the URL of your SVN repo. > > Lionel > >> On 26 Jun 2019, at 18:58, Spencer Graves > <mailto:spencer.gra...@prodsyse.com>> wrote: >> >> �

Re: [Rd] R-Forge > GitHub?

2019-06-27 Thread Spencer Graves
done, in case they want to do anything more with this in the future.   I believe I know how to do 1, 2, and 4, and I can probably figure out 3.  However, before I start on this, I felt a need to thank everyone who contributed to this thread and invite comments, especially if someone thinks I

Re: [Rd] R-Forge > GitHub?

2019-06-28 Thread Spencer Graves
Thanks to Duncan, Henrik and Henrik, Brian, and Gábor:   I created a local copy of the new GitHub version using the following: git clone https://sbgraves237:mypassw...@github.com/sbgraves237/Ecdat.git   That worked in the sense that I got a local copy.  However, after I rolled the

Re: [Rd] R-Forge > GitHub?

2019-06-29 Thread Spencer Graves
sh keys, upload those to GH, and use ssh > authorization instead of https. > > Cheers, > Ott > > On Fri, Jun 28, 2019 at 8:18 PM Spencer Graves > mailto:spencer.gra...@prodsyse.com>> wrote: > > Thanks to Duncan, Henrik and Henrik, Brian, and Gábor: &g

Re: [Rd] R-Forge > GitHub?

2019-06-29 Thread Spencer Graves
estions on how to do this -- or at least on how to find documentation on how to do this.       Thanks,       Spencer On 2019-06-29 14:09, Henrik Bengtsson wrote: On Sat, Jun 29, 2019 at 9:43 AM Spencer Graves wrote: Hi, Ott et al.: What's the best way to get "Travis CI" to

Re: [Rd] R-Forge > GitHub?

2019-06-30 Thread Spencer Graves
H key dated two days ago, when I cloned Ecdat from within RStudio.  And in "~.ssh" I see files id_rsa and id_rsa.pub, both created two days ago.   What do you suggest I try to get past this?   Thanks again for all your help.   Spencer Graves cd Ecdat ### rename my Git

Re: [Rd] R-Forge > GitHub?

2019-07-03 Thread Spencer Graves
st integrate the remote changes hint: (e.g., 'git pull ...') before pushing again. hint: See the 'Note about fast-forwards' in 'git push --help' for details. SpenceravessMBP:Ecdat sbgraves$   Suggestions?   Thanks again,   Spencer Graves On 2019-07-0

[Rd] .travis.yml ... most likely included in error

2019-07-14 Thread Spencer Graves
  Or are thesejust Travis-CI problems?  If yes, what would you suggest they do?   Thanks,   Spencer Graves __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] .travis.yml ... most likely included in error

2019-07-14 Thread Spencer Graves
-- especially on how to find "warnings, treating as errors".   Thanks again,   Spencer Graves On 2019-07-14 10:08, Danny Smith wrote: > Hi Spencer, > > To get rid of the .travis.yml note add a .Rbuildignore file with this > line: > ^\.travis\.yml$ > This wil

Re: [Rd] R-Forge > GitHub?

2019-07-14 Thread Spencer Graves
rating them to GitHub.  I deleted them in a Terminal with "git rm -r inst/doc".  After "git commit" and "git push", I found they had been deleted from the GitHub repository but not my local computer, so I deleted them locally -- without any apparent side effects.

[Rd] GitHub passwords in .git/config?

2019-07-15 Thread Spencer Graves
On 2019-07-15 10:56, Dirk Eddelbuettel wrote: Don't write passwords down like this. Your error is likely in expecting _ssh_ authentication over _https_ -- when it works only over ssh. Use the alternate form for a remote e.g. one that looks like g...@github.com:emacs-ess/ESS.git   I'm

Re: [Rd] GitHub passwords in .git/config?

2019-07-15 Thread Spencer Graves
them fresh from GitHub?   Spencer On 2019-07-15 12:01, Brian G. Peterson wrote: it would be: ssh://g...@github.com:sbgraves237/Ecdat.git On Mon, 2019-07-15 at 11:41 -0500, Spencer Graves wrote: On 2019-07-15 10:56, Dirk Eddelbuettel wrote: Don't write passwords down l

Re: [Rd] GitHub passwords in .git/config?

2019-07-15 Thread Spencer Graves
e. Best, Marcel On 7/15/19 1:48 PM, Spencer Graves wrote: I'm diverging: Now I get: git pull ssh: Could not resolve hostname github.com:sbgraves237: nodename nor servname provided, or not known fatal: Could not read from remote repository. Please make sure you have the correct access

Re: [Rd] New matrix function

2019-10-11 Thread Spencer Graves
d documentation with good examples that tend to ensure quality.  Some maintainers reject my suggestions;  other have accepted them.   Spencer Graves [1] https://en.wikiversity.org/wiki/Searching_R_Packages [2] Caveat:  I wrote both that Wikiversity article and the "sos" pack

[Rd] default col.names from data.frame not the same as as.data.frame

2019-12-09 Thread Spencer Graves
this group what names you all prefer for examples like these.   Thanks,       Spencer Graves __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

[Rd] "simulate" does not include variability in parameter estimation

2019-12-26 Thread Spencer Graves
eed to simulate those as well.  If I combined those with "simulate.glm", what would I call them?  I can't use the word "response", because that's already used with a different meaning. Might "observations" be the appropriate term?   What do you thi

Re: [Rd] "simulate" does not include variability in parameter estimation

2019-12-27 Thread Spencer Graves
On 2019-12-27 04:34, Duncan Murdoch wrote: On 26/12/2019 11:14 p.m., Spencer Graves wrote: Hello, All:     The default "simulate" method for lm and glm seems to ignore the sampling variance of the parameter estimates;  see the trivial lm and glm examples below.  Both thes

[Rd] rpois(9, 1e10)

2020-01-19 Thread Spencer Graves
rnorm(sum(big), lambda[big], sqrt(lambda[big]))   out[!big] <- rpois(sum(!big), lambda[!big])   out   }   Comments?   Thanks,   Spencer Graves __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] rpois(9, 1e10)

2020-01-19 Thread Spencer Graves
On 2020-01-19 09:34, Benjamin Tyner wrote: Hello, All:     Consider: Browse[2]> set.seed(1) Browse[2]> rpois(9, 1e10) NAs produced[1] NA NA NA NA NA NA NA NA NA     Should this happen?     I think that

Re: [Rd] rpois(9, 1e10)

2020-01-19 Thread Spencer Graves
ic, they could write their own version of this function with "arbitraryPrecision" as an optional value for the "bigOutput" argument.   Comments?   Thanks,   Spencer Graves On 2020-01-19 10:28, Avraham Adler wrote: > Technically, lambda can always be numeric. It is the obse

Re: [Rd] rpois(9, 1e10)

2020-01-19 Thread Spencer Graves
ne$integer.max = 2147483647 = 2^31 > 1e9.  That still means that a Poisson distributed pseudo-random number just under that would have to be over 23000 standard deviations above the mean to exceed .Machine$integer.max. > > On Sun, Jan 19, 2020 at 1:58 PM Spencer Graves > mailto:s

Re: [Rd] rpois(9, 1e10)

2020-01-19 Thread Spencer Graves
Adler wrote: > Floor (maybe round) of non-negative numerics, though. Poisson should > never have anything after decimal. > > Still think it’s worth allowing long long for R64 bit, just for purity > sake. > > Avi > > On Sun, Jan 19, 2020 at 4:38 PM Spencer G

Re: [Rd] [External] Re: rpois(9, 1e10)

2020-01-19 Thread Spencer Graves
happen for R 4.0.0 this year, but 2021 may be possible. I few notes inline below: On Sun, 19 Jan 2020, Spencer Graves wrote: On my Mac: str(.Machine) ... $ integer.max  : int 2147483647  $ sizeof.long  : int 8  $ sizeof.longlong  : int 8  $ sizeof.longdouble    : int

Re: [Rd] [External] Re: rpois(9, 1e10)

2020-01-22 Thread Spencer Graves
On 2020-01-22 02:54, Martin Maechler wrote: Martin Maechler on Tue, 21 Jan 2020 09:25:19 +0100 writes: Ben Bolker on Mon, 20 Jan 2020 12:54:52 -0500 writes: >> Ugh, sounds like competing priorities. > indeed. >> * maintain type consistency >> * minimize storage

[Rd] matplot.Date & matplot.POSIXct

2020-01-24 Thread Spencer Graves
Jim asked me if we needed to to have "matplot" masking "graphics::matplot".  Rather than answer that question, I thought I would ask a larger question of this group.   Thanks,   Spencer Graves __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] matplot.Date & matplot.POSIXct

2020-01-27 Thread Spencer Graves
# NOT as POSIXct fda::matplot(AmRev.ct, Y) # problem fixed.   Comments?   Thanks again for the reply.   Spencer Graves B. __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] matplot.Date & matplot.POSIXct

2020-01-28 Thread Spencer Graves
On 2020-01-28 05:13, Martin Maechler wrote: Spencer Graves on Mon, 27 Jan 2020 23:02:28 -0600 writes: Still, as Abby mentioned, turning a simple function into the default method of an S3 generic is easy to do, but comes with a bit of cost, not just S3 dispatch which typically is

[Rd] ":::" operator doesn't work with data object Ecdat:::Crime

2020-03-16 Thread Spencer Graves
", even though "library(plm); data(Crime); Crime" works.  I would naively think a user should be able to compare "Crime" objects documented in different packages using the "::" and ":::" operators, even if a package maintainer chooses not to "export&

[Rd] status of Java & rJava?

2020-03-28 Thread Spencer Graves
ith sessionInfo() to this list or to Stack Exchange or Stack Overflow?   Since I'm getting so many problems with rJava on under both macOS and Windows 10, that suggests to me that potential users could have similar problems, and I should try to remove rJava from Ecfu

Re: [Rd] [BULK] Re: status of Java & rJava?

2020-03-28 Thread Spencer Graves
ssionInfo()" in each case.   Thanks for your help.   Spencer Graves  update.packages() rJava :  Version 0.9-11 installed in /Library/Frameworks/R.framework/Versions/3.6/Resources/library  Version 0.9-12 available at https://cran.rstudio.com Update? (Yes/no/cancel) y sf :  Versio

Re: [Rd] status of Java & rJava?

2020-03-28 Thread Spencer Graves
n to both Simon Urbanek and Prof. Ripley.  Spencer Graves __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] status of Java & rJava?

2020-03-29 Thread Spencer Graves
is architecture?" under Windows 10.  "00install.out" and "Sys.getenv('PATH')" follow.  "library(rJava)" seemed to work, and "help(pac='rJava') displays 0.9-12.  Suggestions?  Thanks, Spencer Graves * installing *source* package 'Ecfun' .

Re: [Rd] status of Java & rJava?

2020-03-30 Thread Spencer Graves
  Tomas Kalibera kindly suggested I might have both 32- and 64-bit Java installed, and it might be accessing the 32-bit.  He further suggested:    R CMD check Ecfun_0.2-4.tar.gz --no-multiarch   That worked.  Thanks, Thomas.   Spencer On 2020-03-29 08:03, Spencer Graves

[Rd] How to find detritis rejected by "R CMD check" on Debian?

2020-04-17 Thread Spencer Graves
ttps://win-builder.r-project.org/incoming_pretest/fda_5.1.3_20200416_225207/Debian/00check.log   Thanks,       Spencer Graves __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

[Rd] "not a valid win32 application" with rtools40-x86_65.exe on Windows 10

2020-04-29 Thread Spencer Graves
error:  unable to load shared object 'c:/Program Files/R/R-4.0.0/library/rJava/libs/i386/rJava.dll':   LoadLibrary failure: ^1 is not a valid win32 application   This was after installing R 4.0.0 and "rtools40-x86_64.exe" under Windows 10 Pro 64-bit.   Suggestions?

Re: [Rd] "not a valid win32 application" with rtools40-x86_65.exe on Windows 10

2020-04-30 Thread Spencer Graves
Hi, Jeroen et al.: On 2020-04-30 03:15, Jeroen Ooms wrote: On Thu, Apr 30, 2020 at 6:38 AM Spencer Graves wrote: Hello, All: "00install.out" from "R CMD check Ecfun_0.2-4.tar.gz" includes: Error: package or namespace load failed for 'Ecfun': .

Re: [Rd] Tips for debugging: R CMD check examples

2010-06-30 Thread Spencer Graves
___ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Spencer Graves, PE, PhD President and Chief Operating Officer Structure Inspection and Monitoring, Inc. 751 Emerson Ct. San José, CA 95126 ph: 408-655-4567

[Rd] perl.exe has stopped working

2010-08-18 Thread Spencer Graves
t do you suggest? I can install the latest version of perl from "www.perl.org" (5.12.1), but I thought I'd ask here first. Thanks, Best Wishes, Spencer Graves __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] c.POSIXct

2010-08-18 Thread Spencer Graves
ric(z) [1] 1282191399 > attr(z, 'tzone') <- 'GMT' > as.numeric(z) [1] 1282191399 > z [1] "2010-08-19 04:16:38 GMT" 2. How can one specify a time zone other than "GMT" and the default local time zone? > attr(z, 'tzone')

Re: [Rd] c.POSIXct

2010-08-19 Thread Spencer Graves
"? I'm not sure what the options should be nor what should be the default, but one option should throw and error if any contradiction was found while another would take all attributes from the first argument and ignore others. Best Wishes, Spencer Graves On 8/19/20

Re: [Rd] c.POSIXct

2010-08-19 Thread Spencer Graves
Hi, Gabor, et al.: I'm suggesting adding "checkAttributes" to "ca", NOT to "c". Spencer On 8/19/2010 8:50 AM, Gabor Grothendieck wrote: On Thu, Aug 19, 2010 at 11:43 AM, Spencer Graves wrote: Hi, Gabor, Paul, et al.: For classe

Re: [Rd] perl.exe has stopped working: Fixed.

2010-08-19 Thread Spencer Graves
build" all seemed to work properly. Of course, there is always a chance of some deeply hidden problem, but the obvious first tests seemed to function exactly as I have come to expect. Best Wishes, Spencer Graves On 8/18/2010 6:00 PM, Spencer Graves wrote: Hello: I ju

[Rd] No RTFM?

2010-08-19 Thread Spencer Graves
ain appears that you are asking us to read the help pages for you." I can appreciate the sentiment in fortunes('rtfm'). In this case, however, "r.ookie" had RTFM (and said so), but evidently the manual was not sufficiently clear. Best Wishes, Spencer Graves __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] No RTFM?

2010-08-20 Thread Spencer Graves
20, 2010 at 2:12 PM, Paul Johnson wrote: On Thu, Aug 19, 2010 at 7:08 PM, Spencer Graves wrote: What do you think about adding a "No RTFM" policy to the R mailing lists? Per, "http://en.wikipedia.org/wiki/RTFM": I think this is a great suggestion. I notice the R mailin

Re: [Rd] No RTFM?

2010-08-21 Thread Spencer Graves
e discouraged to do it. Kind regards Simone On Fri, Aug 20, 2010 at 8:37 PM, Gabor Grothendieck wrote: On Fri, Aug 20, 2010 at 2:12 PM, Paul Johnson wrote: On Thu, Aug 19, 2010 at 7:08 PM, Spencer Graves wrote: What do you think about adding a "No RTFM" policy to the R mailing l

Re: [Rd] No RTFM?

2010-08-21 Thread Spencer Graves
to effectively use r-help. __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Spencer Graves, PE, PhD President and Chief Operating Officer Structure Inspection and Monitoring, Inc. 751 Emerson Ct. San José, C

[Rd] reliability of R-Forge? (moving to r-Devel)

2010-08-26 Thread Spencer Graves
n more valuable if it were more reliable. I very much appreciate the work of the volunteers who maintain it; I am unfortunately not in a position to volunteer to do more for the R-Project generally and R-Forge in particular than I already do. Thanks, Spencer Graves On 8/26/2010 1

[Rd] reliability of R-Forge? (moved to R-Devel)

2010-08-26 Thread Spencer Graves
." I don't know if R-Forge is accepting new volunteers, but it looks like they could use help. Unfortunately, I'm not in a position to volunteer. Best Wishes, Spencer Graves On 8/26/2010 8:28 AM, R P Herrold wrote: On Thu, 26 Aug 2010, Gavin Simpson wrote: On Thu,

[Rd] reliability of R-Forge? (moved to R-Devel)

2010-08-26 Thread Spencer Graves
o work together with the new FusionForge infrastructure. Some services are thus not yet available." I don't know if R-Forge is accepting new volunteers, but it looks like they could use help. Unfortunately, I'm not in a position to volunteer. Best Wishes, Spencer Graves O

[Rd] Wiki entries on "package development process" and "software repository"

2010-09-08 Thread Spencer Graves
ge the entries directly. Otherwise, I'd be pleased to hear your comments, suggested improvements, etc., via email. Thanks, Spencer Graves __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] How to connect R to Mysql?

2010-09-17 Thread Spencer Graves
package in R 2.11.1 64 bit Now how can I connect R with MySql? I am using a windows 7 64 bit version. Please help ASAP. -- Spencer Graves, PE, PhD President and Chief Operating Officer Structure Inspection and Monitoring, Inc. 751 Emerson Ct. San José, CA 95126 ph: 408-655-4567 _

Re: [Rd] How to set up an own package repository

2010-09-17 Thread Spencer Graves
This is also discussed in "Creating R Packages, Using CRAN, R-Forge, And Local R Archive Networks And Subversion (SVN) Repositories ” by Spencer Graves and Sundar Dorai-Raj, available from CRAN -> contributed documentation "http://cran.fhcrc.org/doc/contrib/Gr

Re: [Rd] How to connect R to Mysql?

2010-09-17 Thread Spencer Graves
should have a look at this package. Hth Thomas Am 17.09.2010 17:50, schrieb Spencer Graves: I've recently been through that with some success. I don't remember all the details, but I first looked at "help(pac=RMySQL)". This told me that the maintainer was Jeffrey

Re: [Rd] R-Forge Downtime

2010-11-08 Thread Spencer Graves
info/r-devel -- Spencer Graves, PE, PhD President and Chief Operating Officer Structure Inspection and Monitoring, Inc. 751 Emerson Ct. San José, CA 95126 ph: 408-655-4567 __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] how to store package options over sessions?

2010-11-20 Thread Spencer Graves
ormation read or read/write, make it a file on NFS or CIFS or WebDAV, make it a database that can be read as file or over sockets and so. And Yoda still rules. Dirk -- Spencer Graves, PE, PhD President and Chief Operating Officer Structure Inspection and Monitoring, Inc. 751 Emerson Ct. San Jos

[Rd] R Tools & Vista_x64: Problem compiling RMySQL?

2010-11-26 Thread Spencer Graves
Hello: What do I need to do to compile R packages (especially RMySQL) for the 64-bit version of R 2.12.0 under Vista_x64? I upgraded to "Rtools212.exe" yesterday but immediately got errors from "R CMD check RMySQL_0.7-5.tar.gz". After the first error, I installed it a second time, t

Re: [Rd] R Tools & Vista_x64: Problem compiling RMySQL?

2010-11-26 Thread Spencer Graves
: I've removed R-sig-db. PLEASE don't cross-post, not least because the R-sig-db moderator (me) ends up having to approve all the non-subscribed replies such as Duncan's. On Fri, 26 Nov 2010, Duncan Murdoch wrote: On 26/11/2010 1:06 PM, Spencer Graves wrote: Hello: What

Re: [Rd] [Rcpp-devel] GPL and R Community Policies (Rcpp)

2010-12-01 Thread Spencer Graves
manage the problems they face. Best Wishes, Spencer Graves On 12/1/2010 4:20 PM, Dominick Samperi wrote: On Wed, Dec 1, 2010 at 6:37 PM, Gabor Grothendieck wrote: On Wed, Dec 1, 2010 at 5:18 PM, Hadley Wickham wrote: Perhaps a wider community of R users can weigh in on a policy decis

Re: [Rd] [Rcpp-devel] GPL and R Community Policies (Rcpp)

2010-12-01 Thread Spencer Graves
manage the problems they face. Best Wishes, Spencer Graves On 12/1/2010 4:55 PM, Gabor Grothendieck wrote: On Wed, Dec 1, 2010 at 7:20 PM, Dominick Samperi wrote: On Wed, Dec 1, 2010 at 6:37 PM, Gabor Grothendieck wrote: On Wed, Dec 1, 2010 at 5:18 PM, Hadley Wickham wrote: Perhaps a

Re: [Rd] GPL and R Community Policies (Rcpp)

2010-12-02 Thread Spencer Graves
, Dominick [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel --- This message and its attachments are strictly confidenti...{{dropped:8}} ___

[Rd] 0.5 != integrate(dnorm,0,20000) = 0

2010-12-06 Thread Spencer Graves
from Windows below. I thought you might want to know. Thanks for all your work in creating and maintaining R. Best Wishes, Spencer Graves ### integrate(dnorm,0,2) ## fails on many systems 0 with absolute error < 0 > sessionInfo() R

[Rd] Suggested change to integrate.Rd (was: Re: 0.5 != integrate(dnorm, 0, 20000) = 0)

2010-12-07 Thread Spencer Graves
el-boun...@r-project.org wrote: - To: r-devel@r-project.org, Prof Brian Ripley From: Martin Maechler Sent by: r-devel-boun...@r-project.org Date: 12/07/2010 03:29AM Subject: Re: [Rd] 0.5 != integrate(dnorm,0,2) = 0 Prof Brian Ripley on Tue, 7 Dec 2010 07:41:16 + (GMT) writes:

Re: [Rd] Suggested change to integrate.Rd

2010-12-08 Thread Spencer Graves
" seems misleading (it works fine in many cases) and it doesn't help a user understand how to use integrate( ) correctly/carefully. IMO a simple example like this one w/ dnorm would catch peoples attention and a couple lines of explanation/warning would then make more sense. John Nolan, A

Re: [Rd] Suggested change to integrate.Rd

2010-12-08 Thread Spencer Graves
simple example like this one w/ dnorm would catch peoples attention and a couple lines of explanation/warning would then make more sense. John Nolan, American U -Spencer Graves wrote: - To: John Nolan From: Spencer Graves Date: 12/07/2010 07:58PM Cc: pchau...@uwaterloo.ca, r-devel@r-project.o

Re: [Rd] R vs. C

2011-01-17 Thread Spencer Graves
Another point I have not yet seen mentioned: If your code is painfully slow, that can often be fixed without leaving R by experimenting with different ways of doing the same thing -- often after using profiling your code to find the slowest part as described in chapter 3 of "Writing R Ex

Re: [Rd] R vs. C

2011-01-17 Thread Spencer Graves
eparately. However, this has the distinct advantage of including unit tests with the documentation in a way that should help users understand "myfunc". (Unit tests too detailed to show users could be completely enclosed in "\dontshow". Spencer On 1/17/2

Re: [Rd] R vs. C

2011-01-17 Thread Spencer Graves
ests/ directory? Paul -Original Message- From: r-devel-boun...@r-project.org [mailto:r-devel-boun...@r-project.org] On Behalf Of Spencer Graves Sent: January 17, 2011 3:58 PM To: Dominick Samperi Cc: Patrick Leyshock; r-devel@r-project.org; Dirk Eddelbuettel Subject: Re: [Rd] R vs. C

Re: [Rd] R vs. C

2011-01-17 Thread Spencer Graves
cer On 1/17/2011 3:27 PM, Dominick Samperi wrote: On Mon, Jan 17, 2011 at 5:15 PM, Spencer Graves< spencer.gra...@structuremonitoring.com> wrote: Hi, Paul: The "Writing R Extensions" manual says that *.R code in a "tests" directory is run during "R CMD ch

Re: [Rd] R vs. C now rather: how to ease package checking

2011-01-18 Thread Spencer Graves
On 1/18/2011 8:44 AM, Dominick Samperi wrote: On Tue, Jan 18, 2011 at 4:48 AM, Claudia Beleiteswrote: On 01/18/2011 01:13 AM, Dominick Samperi wrote: On Mon, Jan 17, 2011 at 7:00 PM, Spencer Graves< spencer.gra...@structuremonitoring.com> wrote: Hi, Dominick, et al.: Dem

Re: [Rd] "+" operator on characters revisited

2011-01-23 Thread Spencer Graves
7;abc2' >>> Spencer On 1/23/2011 8:09 AM, Hadley Wickham wrote: Yet another useful suggestion of introducing cat0() and paste0(), for the common use of cat and paste with sep="" was not absorbed by the core R either. stringr has str_c which is a replacement for past

Re: [Rd] "+" operator on characters revisited

2011-01-23 Thread Spencer Graves
On 1/23/2011 8:50 AM, peter dalgaard wrote: On Jan 22, 2011, at 21:08 , Vitalie S. wrote: The only definite argument occurred in the thread against "+" operator was the lack of commutativity (as if one have to prove algebraic theorems in R). I think the real killer was associativity, combined

Re: [Rd] "+" operator on characters revisited

2011-01-23 Thread Spencer Graves
On 1/23/2011 12:15 PM, Vitalie S. wrote: Spencer Graves writes: On 1/23/2011 8:50 AM, peter dalgaard wrote: On Jan 22, 2011, at 21:08 , Vitalie S. wrote: The only definite argument occurred in the thread against "+" operator was the lack of commutativity (as if one hav

[Rd] Reading a specific file during "R CMD check"?

2011-02-04 Thread Spencer Graves
rn the old data, not the modified. I've looked at packages RUnit and svUnit, but have not spent enough time with either to know if they include a solution to this problem. Thanks for your help. Spencer -- Spencer Graves, PE, PhD President and Chief Operating Officer Structure I

Re: [Rd] Reading a specific file during "R CMD check"?

2011-02-05 Thread Spencer Graves
t .libPaths()[1], and that installed package is used by 'check' unless the user's code does really odd things (like manipulate .libPaths()). Hadley On Fri, Feb 4, 2011 at 7:57 PM, Spencer Graves wrote: Hello, All: How can I obtain the location of an example data file in a

[Rd] par(ask=TRUE) in R CMD check?

2011-03-12 Thread Spencer Graves
Hello: What happens in the auto-checks on R-Forge and CRAN with code using par(ask=TRUE)? Is this routine, or can it create problems? The fda package uses ask=TRUE to provide the user with a way to examine a group of plots. In the past, I've marked those tests in \exam

[Rd] Rtools questions

2011-04-05 Thread Spencer Graves
1252 [4] LC_NUMERIC=C [5] LC_TIME=English_United States.1252 attached base packages: [1] stats graphics grDevices utils datasets methods base Thanks, Spencer -- Spencer Graves, PE, PhD President and Chief Operating Officer Structure Inspectio

Re: [Rd] Rtools questions

2011-04-05 Thread Spencer Graves
On 4/5/2011 5:01 PM, Gabor Grothendieck wrote: On Tue, Apr 5, 2011 at 7:51 PM, Henrik Bengtsson wrote: On Tue, Apr 5, 2011 at 3:44 PM, Duncan Murdoch wrote: On 11-04-05 6:22 PM, Spencer Graves wrote: Hello: 1. How can I tell when the development version of Rtools has changed? I

Re: [Rd] Rtools questions

2011-04-05 Thread Spencer Graves
On 4/5/2011 6:03 PM, Gabor Grothendieck wrote: On Tue, Apr 5, 2011 at 8:58 PM, Spencer Graves wrote: On 4/5/2011 5:01 PM, Gabor Grothendieck wrote: On Tue, Apr 5, 2011 at 7:51 PM, Henrik Bengtsson wrote: On Tue, Apr 5, 2011 at 3:44 PM, Duncan Murdoch wrote: On 11-04-05 6:22 PM, Spencer

[Rd] Rtools questions

2011-04-06 Thread Spencer Graves
Hello: 1. How can I tell when the development version of Rtools has changed? For the past few years, I've installed the development version of R tools with each new release of R. I encountered problems with this a few days ago, so I rolled back to Rtools212.exe. Unfortunately, I se

Re: [Rd] Rtools questions

2011-04-06 Thread Spencer Graves
On 4/5/2011 5:01 PM, Gabor Grothendieck wrote: On Tue, Apr 5, 2011 at 7:51 PM, Henrik Bengtsson wrote: On Tue, Apr 5, 2011 at 3:44 PM, Duncan Murdoch wrote: On 11-04-05 6:22 PM, Spencer Graves wrote: Hello: 1. How can I tell when the development version of Rtools has changed? I

Re: [Rd] Wish there were a "strict mode" for R interpreter. What about You?

2011-04-09 Thread Spencer Graves
ata.))data(ETB); data.}. When I run "R CMD check", I get "no visible binding for global variable 'ETB'", even though the function is tested and works during R CMD check. Spencer Hadley -- Spencer Graves, PE, PhD President and Chief Operating O

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