Thank you,
Ben.
I'm committing the fixes.
Martin
>>>>> Ben Bolker
>>>>> on Mon, 21 Mar 2011 23:09:29 -0400 writes:
> simplify: logical or character string; should the result
> be simplified to a vector, matrix or higher dimensional
ry, not on base::summary, so without the
Matrix::summary generic your object never sees the summary method for
lme4 objects.
So you need to Import: Matrix and importFrom(Matrix, summary).
Martin Morgan
exportMethods("coef","summary","show","print")
exportCla
R version 2.13.0 alpha (2011-03-27 r55091)
This error occurs when R CMD check'ing a Bioconductor package:
* checking for unstated dependencies in R code ... WARNING
Error in e[keep] : invalid subscript type 'list'
Execution halted
See the information on DESCRIPTION files in the chapter 'Creating
---
your code example below,
and it did *not* segfault for me (64-bit, Linux Fedora 13).
Martin
>>>>> Douglas Bates
>>>>> on Mon, 28 Mar 2011 09:24:39 -0500 writes:
> Can you provide the output from
> sessionInfo()
> so we can know the p
>>>>> "HL" == Hin-Tak Leung
>>>>> on Thu, 7 Apr 2011 07:51:44 +0100 writes:
HL> Douglas Bates wrote:
>> I isolated the problem and tested then committed a fix. I am going to
>> ask Martin to upload the new release as I
>>>>> Martin Maechler
>>>>> on Thu, 7 Apr 2011 12:24:32 +0200 writes:
>>>>> "HL" == Hin-Tak Leung
>>>>> on Thu, 7 Apr 2011 07:51:44 +0100 writes:
HL> Douglas Bates wrote:
>>> I isolated the probl
>>>>> "HL" == Hin-Tak Leung
>>>>> on Thu, 07 Apr 2011 19:31:35 +0100 writes:
HL> Martin Maechler wrote:
>>>>>>> Martin Maechler on Thu,
>>>>>>> 7 Apr 2011 12:24:32 +0200 writes:
>&g
; (referenced from http://developer.r-project.org/) has not
> been updated for months.
Thank you, Herve.
I've only now read your e-mail.
(and I now also agree that --keep-empty-dirs should *not* be needed
to keep an empty inst/ !)
Thanks for the heads up abo
Fantastic. Thanks a lot, Luke!
I can close the thread just to say the final"it wasn't
Matrix after all!"
;-)
On Fri, Apr 8, 2011 at 20:48, wrote:
> Fixed in R-devel by 55385 and R-2-113-branch by 55386.
>
> The problem was a call to install() in the C srouce code without
> protectin
TALL' should
>>> behave differently (by default) depending on whether it's used
>>> on a source tarball (mode 1) or a package source tree (mode
>>> 2).
>>>
>>> I'm suggesting that, by default, the 3 commands (R CMD bu
ad for
| "libR".
What does 'ldd /path/to/your/survial.so' say? Does the system find libR.so?
Maybe R CMD ldd /path/to/your/survival.so to pick up whatever
environment R configures.
Martin
I have no issues whatsoever on my Ubuntu box with the packages distributed
via CRAN
in detail; R CMD check produces a file
.Rcheck/-Ex.R that contains the compiled example code, and it
is in the evaluation of this file that the error occurs. So you could
dissect it to discover the gory details.
Martin
I have GenomicRanges listed in my Imports: field, and IRanges in the Sugge
> salmajj
> on Mon, 18 Apr 2011 11:11:28 -0700 (PDT) writes:
> Thanks a lot Petr it works!!!
of course ..
> You know for someone who is used to work with matlab it is not so
obvious:)
well, what do you mean with that?
I'm intrigued. After such a blatantly wrong claim ab
ce(methods::getPacakgeName, quote(print(where)))
or
trace(warning, quote(print(sys.calls(
somewhere early in your package (the top of the first file to be
collated) you'll get messages that might point to where things are going
wrong.
Hope that helps,
Martin
** help
*** i
'closure' is not subsettable
maybe you meant
setOldClass("AffymetrixCelSet")
but if I put that in a package that either Depends: or not on
aroma.affymetrix then I don't see the warning in your original report.
I'm not sure you've diagnosed the problem correct
as.factor / as.ordered is not written as a generic. This differs from
as.numeric, as.matrix, and other as.*. The following seems to address
this and does not break make check-all.
FWIW, the patch is against r55563, because with r55564 I see
/home/mtmorgan/src/R-devel/src/main/dounzip.c:75:15:
On 04/20/2011 10:13 AM, William Dunlap wrote:
-Original Message-
From: r-devel-boun...@r-project.org
[mailto:r-devel-boun...@r-project.org] On Behalf Of Martin Morgan
Sent: Wednesday, April 20, 2011 9:56 AM
To: R-devel@r-project.org
Subject: [Rd] Make as.factor an S3 generic?
as.factor
.double.A instead of as.numeric.A) until factor.
Martin
On Wed, 20 Apr 2011, Martin Morgan wrote:
as.factor / as.ordered is not written as a generic. This differs from
as.numeric, as.matrix, and other as.*. The following seems to address
this and does not break make check-all.
FWIW, the pat
read
> http://r.research.att.com/man/R-exts.html#Creating-R-packages
so indeed, we should cancel the sentence
The package subdirectory should be given the same name as the package.
in there, or maybe rather replace it by
The package subdirectory typically has the same name
I haven't take time to look through the
R sources for such candidate pages.
Suggestions are welcome.
> Kind regards
> Christophe
Thank you for the suggestion, Christophe!
Martin Maechler,
ETH Zurich
> --
> Christophe DUTANG
> Ph. D. student at ISFA, L
oncrete!) proposals for
improvement are welcome.
Ideally using texinfo syntax or even better a patch towards
a current version of the manual
/doc/manual/R-exts.texi
from subversion, a nightly tarball, or simply
https://svn.r-project.org/R/trunk/do
> mean.data.frame <- function(x, ...) sapply(x, mean, ...)
exactly.
My personal oppinion is that mean.data.frame() should never have
been written.
People should know, or learn, to use apply functions for such a
task.
The unfortunate fact that mean.data.frame() exists makes people
th
ls without installing RepitoolsExamples.
"if (require(RepitoolsExamples))" in an example on a man page is much
preferred to \dontrun{}, as Simon mentions.
Martin Morgan
For more info: this is covered in the "Writing R Extensions," but is
also described here:
http
Several Bioconductor packages were expecting Windows Rzlib.dll to
provide gzopen / gzread / gzseek / gzgets / gzrewind / gzclose. Are
these gone for good, viz., r55624 ?
Martin
--
Computational Biology
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109
27;t know).
As I think we'd want to use this in the C code which is also
underlying
cor(*, method="kendall")
I'll eventually want a C version, not the least because we may
look into dealing with NA 's in the same -- flexible -- way
that they are handled currently via the
or invoking methods, though maybe hiding hints about important
differences in object behavior -- I am dreading the introductory class
where one tries to explain S3, S4, and reference classes), and partly to
provide a distinction between a 'developer' API and a user API (again
with quest
L) {
c(gettext("Packages suggested but not available for checking:"),
and similar for 'Enhances' in lieu of 'Suggests'.
If Dario really uses R 2.13.0 (or newer),
and he gets the above error message for a package that is not
required but only
t and 64bit versions, in the ESS
menu, or via
M-x R- [Tab completion]
Very nice, very useful in my eyes.
Martin
> Regards Ronggui
> On 4 May 2011 13:26, Thomas Lumley wrote:
>> On Wed, May 4, 2011 at 3:25 PM, Yihui Xie
>> wrote:
>>> 1. "Few
GGESTS_=false
which of course is what Brian and Simon alluded to when they
told you you could turn off the behavior ...
Ok, so we have finally converged
I think I agree with Hervé: If a user has not set the
magic environment variable he should get an ERROR instead of a NOTE
but the error *messa
This change has significant consequences for Windows packages using R's
zlib, including packages providing core Bioconductor functionality. Are
the changes in r55624 meant to be long-term?
Martin
On 04/29/2011 03:13 PM, Martin Morgan wrote:
Several Bioconductor packages were expe
An .Rnw file in the vignettes/ directory might reasonably \usepackage or
\include .sty, .bib, or other (e.g., image) files in the same directory
or a sub-directory. The .Rnw file is copied to inst/doc and hence
installed, but the additional files are not. This means that the
installed .Rnw file
he post copied below.
Yes. I've added such a link now...
though quite disillusioned with a very vague hope that useRs
would read the help page so thoroughly ...
Martin Maechler, ETH Zurich
SpG>Thanks, Spencer
SpG> On 5/14/2011 3:30 AM, David Winsemius wrote:
>
also seems like a poor choice. What other strategies are recommended?
Martin
On 05/06/2011 09:58 AM, Martin Morgan wrote:
This change has significant consequences for Windows packages using R's
zlib, including packages providing core Bioconductor functionality. Are
the changes in r55624 meant
trying to generate an object from a virtual class ("A")
> .AA$new()
initialize,AA
An object of class "AA"
Martin
The problem is that 'getRefClass("MyDataFrame")$new' calls (I think) the
method that was written for "ANY". Thus even though I write a
might want is names(getClassDef("A")@subclasses) (see
slotNames(class(getClassDef("A"))) for other useful info).
Martin
setClass(Class="A", representation=list(a="numeric"))
setClass(Class="B", contains="A", representation=list(b="
did, apologies.
Maybe you're looking for ?ReferenceClasses rather then S4 classes?
Martin
-Brian
--
View this message in context:
http://r.789695.n4.nabble.com/S4-Slot-assignment-within-function-tp3572077p3572077.html
Sent from the R devel mailin
our intention is that name=value to be substituted with N=99, but
you end up with name=99. You could arrange to parse this correctly, but
this isn't usually what you _want_ to do and I don't really understand
what you're trying to accomplish. Maybe
.foo.update <- functio
ll S4 new() and, for me, introduces a
source of uncertainty / confusion when trying to understand why code
does not work.
Martin
John
---
> tc <- setRefClass("testclass", fields = list(a = "numeric"),
+ methods = list(
+ ))
> t1
turn graph 1.30.
Are there ways to make dependencies on Bioconductor less complicated?
Use the current version of R.
FWIW, part of the motivation for hosting graph only on Bioconductor
(previously it was dual-hosted) is to simplify version problems --
On 06/10/2011 05:46 PM, Kornelius Rohmeyer wrote:
Dear Martin,
thanks for your response.
The superclass graphBase is introduced in graph 1.30. In my
understanding the problem is that our package gMCP is build on CRAN
for R 2.12 with the package graph in version 1.30. Unfortunately
biocLite
29s.
For Bioconductor this will certainly require new hardware across all
supported platforms, and almost certainly significant effort to improve
build system efficiencies.
Martin
Byte-compilation is quite expensive (so you definitely want to do it at
install time, which requires lazy-load
e/mtmorgan/R/x86_64-unknown-linux-gnu-library/2.14/snow'
The downloaded packages are in
'/tmp/RtmpoGypnz/downloaded_packages'
Warning message:
In install.packages("snow", repos = "http://cran.r-project.org";) :
installation of package 'snow' had
.. and I am asking the same question as Simon:
Are you sure you need to use your own C code,
instead of simply using the R packages 'gmp' and 'Rmpfr' and
work with R code?
--
Martin Maechler, ETH Zurich
>> I have installed mpfr and gmp under the instructions of
ay}}, \code{\link{ave}}}
iw> (simplify2array, by, and ave should probably also be
iw> mentioned in the "See also" section of "apply".)
iw> hope this helps.
Yes, thank you.
I did (something like) that.
--
Martin Maechler, ETH Zurich
iw> /iaw
explained elsewhere in the documentation, 'NA' is required, not
> 'NULL'.
> An anonymous expert suggested that I should attach an svn diff file to
> this report, so I will.
Not necessary. I'
ike the user should get a chance to clean up
their mess before the system does it for them, so the above seems like a
bug. But maybe there is another way to understand this?
Martin
--
Computational Biology
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N. PO Box 19024 Seattle,
sing perspective:
I think
ImportClassesFrom(...)
should be much more widely used, in order to diminish such class
"conflicts".
Wherever the new code produces warnings (does it?) about
duplicate class names, it would be good to "advertize" the
ImportClassesFrom()
of producing unique row.names,
{though, I must say, not the "optimal" one if the issue is efficiency}
Rather keep using [,] and let's not get into having to maintain
yet another data.frame method ..
Martin Maechler, ETH Zurich
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
Hi Rolf,
please excuse a short "top-reply":
As I see you are using an operating system (instead of Win..),
can you try in the shell
echo 'X11.options()$type' | R --vanilla --slave
and does that really *not* report
[1] "cairo"
??
(and BTW: Your subject had tolower("LL") instead of
>>>>> Uwe Ligges
>>>>> on Mon, 8 Aug 2011 21:38:06 +0200 writes:
> On 08.08.2011 10:20, Martin Maechler wrote:
>> Hi Rolf,
>>
>> please excuse a short "top-reply":
>>
>> As I see you are usin
gin(src))
## 'Developer' classes
setClass("Punct", prototype=prototype(function(src) {
gsub("[[:punct:]]", "", src)
}), contains="Plugin")
Punct <- function() new("Punct")
setClass("Digit", prototype=p
ding
> it in base R. Alternatively, something like this could be
> included in the Matrix package.
well, see above and let us know if you see anything lacking in
bandSparse().
Till now we haven't got much feedback about it, and there may
well be room for improvement.
Martin Mae
ted by `methods()` there but
not in R2.13.x. I have now compiled the development version on two
It looks like the cog that has changed between release and devel is the
addition of export(plot.function) and S3method(plot, "function") to the
NAMESPACE of graphics.
Martin
Fedora insta
>>>>> Jeremy David Silver
>>>>> on Fri, 26 Aug 2011 15:08:03 +0200 writes:
> Thanks for the suggestion, Martin! I looked at both
> Matrix::band and Matrix::bandSparse. Maybe I misunderstand the
> help pages and the examples, but from what I
of expm()
which is faster for the special case of evaluating
expm(A * t) %*% v {A matrix, v vector, t scalar}
and *still* numerically reliable.
Martin Maechler, ETH Zurich
>> Which is why I said it applies when the system is "diagonalizable".
>
[R.app GUI 1.41 (5874) i386-apple-darwin9.8.0]
It does not happen on Linux (different versions)
nor Windows (2.13.1 patched, early August).
As this is calling LAPACK code,
I guess that this is yet another case where the Mac version
of optimized BLAS / LAPACK is playing wrongly.
Mart
>>>>> Simon Urbanek
>>>>> on Thu, 8 Sep 2011 09:33:23 -0400 writes:
> On Sep 8, 2011, at 4:01 AM, Martin Maechler wrote:
>>>>>>> David Winsemius
>>>>>>> on Tue, 6 Sep 2011 00:38:13 -0400 writes:
&g
t i = 0; i < it; ++i)
#pragma omp critical
{
j = omp_get_thread_num();
SEXP elt = PROTECT(Rf_ScalarInteger(1));
INTEGER(res)[j] = INTEGER(res)[j] + INTEGER(elt)[0];
UNPROTECT(1);
}
UNPROTECT(1);
return res;
}
and
> dyn.load("omp.so&qu
'..' when simple
dir(all.files=TRUE)
includes them.
However, from a strict description (of the argument names, and
also the help file) I would have expected that both would *include*
rather than omit them.
But then --the scenario abov, and also more general
reasoning -- would rat
ved though so a typo in the input doesn't "break"
> the code?
well, what every ' "break" the code ' means,
you are right that a more informative error message makes sense
here (though, the code now is slightly longer).
I've committed such a change {
else {
for (i = 0; i < idx; i++)
REAL(result)[n++] = REAL(u)[i % k];
}
we end up writing REAL(result)[n++] = REAL(u)[i % k] even though
(gdb) p TYPEOF(u)
$15 = 24
i.e., RAWSXP
(gdb) p TYPEOF(result)
$16 = 13
i.e., INTSXP
it
round this is to redefine .o rules
%.o: %.c
$(CC) $(MY_ZFLAGS) $(ALL_CPPFLAGS) $(ALL_CFLAGS) -c $< -o $@
Is there a better way? Can the ordering of the include search path be
altered in src/gnuwin32/fixed/etc/Makeconf:160-161?
Martin
--
Computational Biology
Fred Hutchinson Cancer Re
> Ben Bolker
> on Thu, 15 Sep 2011 11:03:26 +0200 writes:
> Inspired by
>
http://stackoverflow.com/questions/7487778/could-you-tell-me-what-this-error-means
> I wrote the following very small (one-line) patch which
> returns an *informative* error message when R tri
Allocating many small objects triggers numerous garbage collections as R
grows its memory, seriously degrading performance. The specific use case
is in creating a STRSXP of several 1,000,000's of elements of 60-100
characters each; a simplified illustration understating the effects
(because the
, quiet=TRUE))),
error=function(...) {})
Martin
According to ?sink:
Messages sent to ‘stderr()’ (including those from ‘message’, ‘warning’ and ‘stop’) can be
diverted by ‘sink(type = "message")’ (see below).
I'm pretty sure it's the system(), or .Internal() calls which are the
native HTML version deleted]]
Gabor, could you try to set a good example and *not* post in
HTML (even though your messages are fine when transformed to
plain text).
Thank you Gabor for your effort,
and best regards,
Martin
--
Martin http://stat.ethz.ch/people/maechler
Seminar f
ser to the current
code. I have very slightly changed it, e.g., using anyNA(.),
and tested it with some more examples... and this does look good
to me in the sense that it is "internally more consistent".
To get this going and "exposed to CRAN", I'm committing it
(with the regre
--with-tk-
where ever needed for me on 14.04 or earlier Ubuntu's... so I do
wonder how you got into problems at all.
Martin
> Ben
> On 15-05-26 10:25 AM, Dirk Eddelbuettel wrote:
>>
>> Ben,
>>
>> At work with little time s
ttern)
grep(pattern, slotNames(x), value = TRUE)
Instead of setOldClass, define a $ method on A
setMethod("$", "A", function(x, name) slot(x, name))
And then
a = new("A")
a$
d = new("D")
d$
I don't know about the setOldClass problem; it se
t;generic",base_function)]
and is mangled because you've post via Nabble which may always
use HTML.
I'd really us to consider **banning** the use of Nabble for
R-devel, completely. People on this list should be able to
subscribe to a mailing list and deal with mail filtering etc...
Martin Maechler,
ETH Zurich
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
SO* all the other S3
> method code that all.effects should be treated as a regular R
> function.
> I would very much like such a feature in R, and for that reason,
> I'm cross posting this (as one of the famous exceptions that
> accompany real-l
u use it in your package, say because one function uses
non-standard evaluation and hence 'xy',
*all* erronous global uses of 'xy in all other functions in your
package will *not* be flagged by the nice codetools package
functionality which is behind that part of R CMD check.
Martin
#x27;t know enough of the details.
Also, I did not find which notes (from developer.r-project.org)
you were refering to.
Given the broad agreement that we want to start working /
investigating this, we can well close the thread here for now
(and deal with ideas, issues, details within R-core).
Martin
replicate(30, capture.output(print(fx)))
stopifnot(r[,1] == r)
# ^^^ fails because of bug
but the R 3.2.1 release candidate probably really cannot be
touched now, with something non-trivial like this.
We'd be *very* happy to get such problems during alpha or beta
testing phase (or even before).
Martin Maechler
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
of all involved --
for reporting the bug here!
BTW: I've committed svn rev 68519
about ten minutes ago which does fix the bug (simply applying your good advice)
and contains a regression test.
Thank you once more, Radford!
Martin Maechler
__
R-devel@r-project.org mailing list
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ge to R-patched because I had not been
100% sure that there were no "bad" implications -- so wanted to wait a
couple of days -- and then forgot... I am sorry.
Still your "reminder" comes very very late in the release
process for R 3.2.1. ... but as an exception,
omas Lumley were *not* repeated this time (I think)
https://stat.ethz.ch/pipermail/r-devel/2006-August/039012.html
-
Historical note: At the time, there was only 'paste()' in base R.
Gabor did mention paste0() as a possible compromise,
and indeed, we did add paste0() to R event
ts
"plot.prcomp" "plot.princomp" "plot.profile.nls"
graphicsstatsstats
"plot.raster" "plot.spec" "plot.stepfun"
stats graphics
travis-ci.org/metacran/r-builder/builds/71225331#L7405
Yes. That's what R-devel is: "in development" and so, human errors do happen.
... and are corrected. ... already more than half an hour ago.
No need to trumpet to the world... I think
(R-core w
here are comments in
the sources that are lost in the process (of parsing,
byte-compiling, saving in binary, ),
but never mind:
you've marked your changes well and I can use your version to
modify the sources.
From what I've understood, the changes make much sense and look
go
>>>>> "MM" == Martin Maechler
>>>>> on Fri, 17 Jul 2015 18:00:28 +0200 writes:
MM> Dear Keith,
>>>>>
>>>>> on Thu, 16 Jul 2015 08:58:11 + writes:
>> Dear R Core Team,
>> Last wee
ctors which are mostly zero
(and hence often both equal to zero), but in other cases, this
may be more problematic (think of a case when also both vectors
are mostly (exactly) equal, but then there are a few
outliers...).
But in spite of such cases, as said above, I'm almost sure this
won
daily snapshot
tarballs from (new URL) https://stat.ethz.ch/R/daily/
The above failure is due to a bogous commit to the development version
of R in January(!) ...
and is now fixed in R-devel .. will be fixed in R 3.2.2 patched
next week.. but is most probably not making it into R 3.2.2
which has been in co
ut am almost sure that we could state that
for(n in obj) { ... }
should be semantically equivalent to
for(n in as.vector(obj)) { ... }
but there may be subtleties here
--> posting back to R-devel so people can experiment if the
above is true, and if not *where*.
Mart
tion layer. Reports to the
contrary welcome... Martin
- Original Message -
> Hi David,
>
> - Original Message -
> > From: "David Smith"
> > To: "Dan Tenenbaum" , "Uwe Ligges"
> > , "Elliot Waingold"
> >
I'm trying to apply a function defined in the VW R docs, that attemps to
convert a data.table object to Vowpal Wabbit format. In the process i'm
getting the error in printf mentioned in the subject.
The original function is here:
https://github.com/JohnLangford/vowpal_wabbit/blob/master/R/dt2vw.R
/pub/RWin:
Line starting ' available.packages(URL, method="internal")
Warning: unable to access index for repository
http://www.stats.ox.ac.uk/pub/RWin:
cannot open URL 'http://www.stats.ox.ac.uk/pub/RWin/PACKAGES'
Package Version Priority Depends Imports LinkingTo
On 08/25/2015 01:30 PM, Kevin Ushey wrote:
Hi Martin,
Indeed it does (and I should have confirmed myself with R-patched and R-devel
before posting...)
actually I don't know that it does -- it addresses the symptom but I think there
should be an error from libcurl on the 403 / 404 rather
(as by the subject's wording) ?
Internally, in these cases the matches do happen with character
coerced objects eventually; still I'd tend to agree that allowing some of
these as arguments to match() in addition to the
wide-sense-vectors (and NULL !) would make sense.
Martin
> Bi
^^^ not entirely arbitrary, but strongly linked to
>> allowing %$1 to %$99 !*/
>>
>>
>>
>> On 22/08/2015 04:21, Martin Bel wrote:
>>
>>> I'm trying to apply a function defined in the VW R docs, that attemps to
>>> convert a dat
>>>>> "DM" == Duncan Murdoch
>>>>> on Wed, 26 Aug 2015 19:07:23 -0400 writes:
DM> On 26/08/2015 6:04 PM, Jeroen Ooms wrote:
>> On Tue, Aug 25, 2015 at 10:33 PM, Martin Morgan
wrote:
>>>
>>> actually I don
On 08/27/2015 08:16 AM, Martin Maechler wrote:
"DM" == Duncan Murdoch
on Wed, 26 Aug 2015 19:07:23 -0400 writes:
DM> On 26/08/2015 6:04 PM, Jeroen Ooms wrote:
>> On Tue, Aug 25, 2015 at 10:33 PM, Martin Morgan
wrote:
>>>
>>> act
R-devel r69197 returns appropriate errors for the cases below; I know of a few
rough edges
- ftp error codes are not reported correctly
- download.file creates destfile before discovering that http fails, leaving an
empty file on disk
and am happy to hear of more.
Martin
On 08/27/2015 08
on r69202?
>>>>>
>>>>> It seems, that newer R-devel versions are now
>>>>> published on /pub/misc/cran/src/base-prerelease, for
>>>>> example at http://ftp5.gwdg.de/pub/misc/cran/, but
>>>>> without an R
x27; ...make[3]: *** [reg-packages.Rout]
Error 1
>> make[2]: *** [test-Reg] Error 2
>> make[1]: *** [test-all-basics] Error 1
>> make: *** [check] Error 2
>>
>> Looking at reg-packages.Rout.fail shows
> The r-devel commit log [1] shows th
"
(whereas e.g., complex(re = Inf, im = NaN) considered as
one of the infinitely many complex infinities by at least
some of the C library implementations.
---
I have found that match(), unique(), and duplicated() still
behave pretty pecularly --- I'd say bugously --- even after the
69410 change.
Some illustration of the above -- but with the "old" R 3.2.2
behavior is available at http://rpubs.com/maechler/complex-NAs-v3_2_2 .
--
Martin Maechler
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
s is only defined in the current release version of S4Vectors, which is the
only version expected to straddle R versions with different signatures.
Martin Morgan
>
> Maybe a red herring...
>
> ~Malcolm
>
> > -Original Message-
> > From: R-devel [
ault
> initialization worked for formula classes as well.
Well,
yes "of course", it was fixed quite a while ago ..
as I had ("almost") promissed (below).
Fixed only for R-devel though, e.g., because it potentially
requires package re-installation, etc.
Martin
> C
Core) should just apply that patch to the
R/src/extras/tre/ sources.
But this does not seem to be related to your original problem
where compilation stopped during tools package building,
or does it ?
Martin Maechler,
ETH Zurich
> -- Vinh
> On Thu, Oct 8, 2015 at 7:22 PM, Vinh N
else names(y) <- nm[!nas]
> y
> }
> ## MWE
> x <- c(10, 11, 11, 12, 12, 13)
> rank(x, ties.method="first")
> rank2(x, ties.method="last")
Indeed, this makes sense to me, and is easy enough to document
and maintain, and preferable to asking useRs
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