Re: [Rd] Undocumented S4 method Warning For Bracket

2013-12-11 Thread Martin Morgan
On 12/05/2013 07:00 PM, Dario Strbenac wrote: Hello, With R version 3.0.2 Patched (2013-10-30 r64123) I don't see warnings that I get in R Under development (unstable) (2013-11-03 r64145) The warnings are like : Undocumented S4 methods: generic '[' and siglist 'BayMethList,ANY,ANY' The fu

[Rd] Strategies for keeping autogenerated .Rd files out of a Git tree

2013-12-11 Thread Kirill Müller
Hi Quite a few R packages are now available on GitHub long before they appear on CRAN, installation is simple thanks to devtools::install_github(). However, it seems to be common practice to keep the .Rd files (and NAMESPACE and the Collate section in the DESCRIPTION) in the Git tree, and to

Re: [Rd] Strategies for keeping autogenerated .Rd files out of a Git tree

2013-12-11 Thread Gábor Csárdi
Hi, this is maybe mostly a personal preference, but I prefer not to put generated files in the vc repository. Changes in the generated files, especially if there is many of them, pollute the diffs and make them less useful. If you really want to be able to install the package directly from github

[Rd] freetype 2.5.2, problem with the survival package, build R 2.15.x with gcc 4.8.x

2013-12-11 Thread Hin-Tak Leung
Here is a rather long discussion etc about freetype 2.5.2, problem with the survival package, and build R 2.15.x with gcc 4.8.x. Please feel free to skip forward. - freetype 2.5.2: the fix to cope with one of the Mac OS X's system fonts just before the release of freetype 2.5.1 caused a regre

[Rd] R CMD INSTALL may create invalid DLL under Windows

2013-12-11 Thread Dominick Samperi
Under Windows the make include share/make/winshlib.mk uses nm to grab symbols from object files to insert into a module definition file tmp.def that is used to create a package DLL. This works fine provided the DLL is only used via exported function entry points, which is the case currently, I susp