Hi

Quite a few R packages are now available on GitHub long before they appear on CRAN, installation is simple thanks to devtools::install_github(). However, it seems to be common practice to keep the .Rd files (and NAMESPACE and the Collate section in the DESCRIPTION) in the Git tree, and to manually update it, even if they are autogenerated from the R code by roxygen2. This requires extra work for each update of the documentation and also binds package development to a specific version of roxygen2 (because otherwise lots of bogus changes can be added by roxygenizing with a different version).

What options are there to generate the .Rd files during build/install? In https://github.com/hadley/devtools/issues/43 the issue has been discussed, perhaps it can be summarized as follows:

- The devtools package is not the right place to implement roxygenize-before-build - A continuous integration service would be better for that, but currently there's nothing that would be easy to use - Roxygenizing via src/Makefile could work but requires further investigation and an installation of Rtools/xcode on Windows/OS X

Especially the last point looks interesting to me, but since this is not widely used there must be pitfalls I'm not aware of. The general idea would be:

- Place code that builds/updates the .Rd and NAMESPACE files into src/Makefile - Users installing the package from source will require infrastructure (Rtools/make) - For binary packages, the .Rd files are already generated and added to the .tar.gz during R CMD build before they are submitted to CRAN/WinBuilder, and they are also generated (in theory) by R CMD build --binary

I'd like to hear your opinion on that. I have also found a thread on package development workflow (https://stat.ethz.ch/pipermail/r-devel/2011-September/061955.html) but there was nothing on un-versioning .Rd files.


Cheers

Kirill

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