Re: [Rd] file 2 is not in sorted order error building unsuffered consequences

2012-05-08 Thread Duncan Murdoch
On 12-05-08 1:46 AM, Joshua Wiley wrote: Hi All, I just downloaded the source tar ball (Revision: 59324 Last Changed Date: 2012-05-07) and tried to compile on a Win x64 system. I am using Rtools version 2.15.0.1919. The only change I make is changing MkRules.dist -> MkRules.local and setting

Re: [Rd] How to list package dependency on a Bioconductor package?

2012-05-08 Thread Steven Lund
I recently submit a package called QuasiSeq. The package source and Windows binary worked fine, but the MacOS X binary failed. The bottom of the CRAN page for QuasiSeq shows Downloads: Package source: QuasiSeq_1.0-1.tar.gz MacOS X binary: not available, see check log. Windows binary

Re: [Rd] file 2 is not in sorted order error building unsuffered consequences

2012-05-08 Thread Joshua Wiley
On Tue, May 8, 2012 at 3:48 AM, Duncan Murdoch wrote: > On 12-05-08 1:46 AM, Joshua Wiley wrote: >> >> Hi All, >> >> I just downloaded the source tar ball (Revision: 59324 Last Changed >> Date: 2012-05-07) and tried to compile on a Win x64 system.  I am >> using Rtools version 2.15.0.1919.  The on

Re: [Rd] How to list package dependency on a Bioconductor package?

2012-05-08 Thread Simon Urbanek
Steven, On May 7, 2012, at 1:24 PM, Steven Lund wrote: > I recently submit a package called QuasiSeq. The package source and > Windows binary worked fine, but the MacOS X binary failed. The bottom of > the CRAN page for QuasiSeq shows > > Downloads: > Package source: QuasiSeq_1.0-1.tar.gz

Re: [Rd] How to list package dependency on a Bioconductor package?

2012-05-08 Thread Martin Morgan
On 5/8/2012 8:44 AM, Simon Urbanek wrote: Steven, On May 7, 2012, at 1:24 PM, Steven Lund wrote: I recently submit a package called QuasiSeq. The package source and Windows binary worked fine, but the MacOS X binary failed. The bottom of the CRAN page for QuasiSeq shows Downloads: Package

Re: [Rd] file 2 is not in sorted order error building unsuffered consequences

2012-05-08 Thread Duncan Murdoch
This time it was a similar error on a different file. Now fixed. Duncan Murdoch On 08/05/2012 11:20 AM, Joshua Wiley wrote: On Tue, May 8, 2012 at 3:48 AM, Duncan Murdoch wrote: > On 12-05-08 1:46 AM, Joshua Wiley wrote: >> >> Hi All, >> >> I just downloaded the source tar ball (Revision:

Re: [Rd] How to list package dependency on a Bioconductor package?

2012-05-08 Thread Simon Urbanek
On May 8, 2012, at 11:56 AM, Martin Morgan wrote: > On 5/8/2012 8:44 AM, Simon Urbanek wrote: >> Steven, >> >> On May 7, 2012, at 1:24 PM, Steven Lund wrote: >> >>> I recently submit a package called QuasiSeq. The package source and >>> Windows binary worked fine, but the MacOS X binary failed

Re: [Rd] f951.exe: sorry, unimplemented: 64-bit mode not compiled

2012-05-08 Thread Balasubramanian Narasimhan
The original post below refers to an issue that arose with glmnet. It has since been fixed but the underlying problem (I believe) is a bug in gcc/gfortran 2.6.3 toolchain. Here is a reproducible example, test.f90. program dblbug real :: x, y x=2 y=exp(dble(x)) end program dblbug Compile