Full_Name: emiel ver loren
Version: 2.2.0
OS: Windows XP
Submission from: (NULL) (145.117.31.248)
Dear R-community and developers,
I have been trying to read in a tab delimeted file where the column names and
the row names are of the form "GO:051" (gene ontology IDs). When using:
> gomat<-r
Please do not report documented behaviour as a bug!
See the 'check.names' argument to read.table.
In your second example you are applying as.character to a data frame, and
you seem not to realize that. We specifically ask you NOT to use R-bugs
to ask questions. (What is happening is that you g
[EMAIL PROTECTED] writes:
> Full_Name: emiel ver loren
> Version: 2.2.0
> OS: Windows XP
> Submission from: (NULL) (145.117.31.248)
>
>
> Dear R-community and developers,
>
> I have been trying to read in a tab delimeted file where the column names and
> the row names are of the form "GO:05
On Fri, 20 Jan 2006 [EMAIL PROTECTED] wrote:
> Full_Name: emiel ver loren
> Version: 2.2.0
> OS: Windows XP
> Submission from: (NULL) (145.117.31.248)
>
>
> Dear R-community and developers,
>
> I have been trying to read in a tab delimeted file where the column names and
> the row names are of
[EMAIL PROTECTED] writes:
> On Fri, 20 Jan 2006 [EMAIL PROTECTED] wrote:
>
> > Full_Name: emiel ver loren
> > Version: 2.2.0
>
> We do ask you not to send reports on obselete versions of R.
Well, we might forgive that (please at least check against the current
NEWS file), but
USING FAKE EMAIL
On Fri, 20 Jan 2006, Peter Dalgaard wrote:
[...]
> Yes, this is a bit nasty, but... What is happening is similar to this:
>
>> d <- data.frame(a=factor(LETTERS), b=factor(letters))
>> d[1,]
> a b
> 1 A a
>> as.character(d[1,])
> [1] "1" "1"
>> as.character(d[1,1])
> [1] "A"
>> as.character(d[1,1
Prof Brian Ripley <[EMAIL PROTECTED]> writes:
> > The thing is that as.character on a list will first coerce factors to
> > numeric, then numeric to character.
>
> Nope. It just coerces an INTSXP to a STRSXP. as.character (and all
> other forms of coercion that I can think of quickly) ignores
On Fri, 2006-01-20 at 07:47 +, Prof Brian Ripley wrote:
> This is related to the incorrect bug report PR#7820. Marc Schwartz
> pointed out in
>
> https://stat.ethz.ch/pipermail/r-devel/2005-April/033016.html
>
> an example of a real problem. If you call par(mfg=) after par(mfrow) (or
> mfc
in my view it's not always good to get this answer, but your "problem"
is not too deeply hidden in the manpages, so simply read the
documentation of read.table:
?read.table
(and look out for the "check.names" flag)
regards,
joerg
__
R-devel@r-proje
On 19 Jan 2006, [EMAIL PROTECTED] wrote:
> We do recommend you try INSTALLing and loading the package before R
> CMD check. The most common problem I have found is that the DSO/DLL
> cannot be loaded, and there loading will give a more extensive error
> message.
Yes, the package INSTALLs and loa
Hi,
I'm simulating a Markov chain in Fortran interfaced with R-2.2.1 in order
to generate data according to a Markov Random Field called the Potts model.
R Version:
platform i686-pc-linux-gnu
arch i686
os linux-gnu
system i686, linux-gnu
status
major2
minor2.1
year 2005
All arguments to functions called from C by Fortran are pointers
(or should be: yours are not). The error is within your own code.
You don't want to call rndstart and rndend around every call, only before
the first and after the last.
This is not the list for advice om mixed Fortran/C programmi
This really is an R-devel question, so moved there. (Just what would you
use R-devel for?)
On Fri, 20 Jan 2006, Paul Johnson wrote:
> On Fedora Core Linux 4, I have a cron job that causes R to update all
> packages and install new ones. Lately, I notice in the log that some
> packages fail to
I've run into a problem that I hope has an obvious solution. The sp
package uses S4 classes and has a NAMESPACE, and when installed without
package versions, runs OK, passes R CMD check, and so on.
A user reported that he installed it --with-package-versions, and that
from then on it would fai
On Fri, 20 Jan 2006, Roger Bivand wrote:
> I've run into a problem that I hope has an obvious solution. The sp
> package uses S4 classes and has a NAMESPACE, and when installed without
> package versions, runs OK, passes R CMD check, and so on.
>
> A user reported that he installed it --with-p
Prof Brian Ripley wrote:
> Quite a while back we set the goal of running R in 16Mb RAM, as people (I
> think Kjetil) had teaching labs that small.
It's a while since I actually har R used on such small machines, I think
64 MB is quite acceptable now.
Kjetil
>
> Since then R has grown, and we h
Hi, Ben, et al.:
The issue Ben identified with confint(nls(... )) generates a hard
failure for me. Specifically the command "confint(m1)" in his script
below under Rgui 2.2.1 first says, "Waiting for profiling to be done..."
then forces a screen to pop up with heading "R for Windows
From: Kjetil Brinchmann Halvorsen
>
> Prof Brian Ripley wrote:
> > Quite a while back we set the goal of running R in 16Mb
> RAM, as people (I
> > think Kjetil) had teaching labs that small.
>
> It's a while since I actually har R used on such small
> machines, I think
> 64 MB is quite accepta
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