UPDATE: textproc/py-yaml 3.12

2016-11-12 Thread Jonathan Gray
Index: Makefile === RCS file: /cvs/ports/textproc/py-yaml/Makefile,v retrieving revision 1.14 diff -u -p -r1.14 Makefile --- Makefile9 Dec 2015 18:26:47 - 1.14 +++ Makefile13 Nov 2016 05:15:05 - @@ -2,10 +2,9 @@

UPDATE: textproc/lua-yaml 6.1

2016-11-12 Thread Jonathan Gray
Index: Makefile === RCS file: /cvs/ports/textproc/lua-yaml/Makefile,v retrieving revision 1.2 diff -u -p -r1.2 Makefile --- Makefile16 Oct 2016 23:21:23 - 1.2 +++ Makefile13 Nov 2016 05:12:28 - @@ -1,7 +1,7 @@ # $

UPDATE: devel/libyaml 0.1.7

2016-11-12 Thread Jonathan Gray
https://bitbucket.org/xi/libyaml/raw/6d5f97d2330147c286839bacfa0c66fac3992faf/announcement.msg * Fixed segfault in yaml_string_write_handler. * Fixed invalid simple key assertion. * Fixed error handling in some examples (thank to Mathias Svensson). * Removed obsolete VS project files. Index: Make

Re: UPDATE: devel/doxygen

2016-11-12 Thread Jeremie Courreges-Anglas
Nigel Taylor writes: > On 10/22/16 16:42, Rafael Sadowski wrote: >> On Tue Sep 20, 2016 at 01:33:34AM +0100, Stuart Henderson wrote: >>> These plist changes for every update are getting silly, I think I'd >>> rather disable doxygen in those ports.. >>> >> >> Other opinions or agreements? >> > >

Re: UPDATE: devel/doxygen

2016-11-12 Thread Nigel Taylor
On 10/22/16 16:42, Rafael Sadowski wrote: > On Tue Sep 20, 2016 at 01:33:34AM +0100, Stuart Henderson wrote: >> These plist changes for every update are getting silly, I think I'd >> rather disable doxygen in those ports.. >> > > Other opinions or agreements? > I don't build qt5/kde4/kde5 for am

Re: New: biology/hmmer

2016-11-12 Thread Senthil Kumar M
On Sat, 12 Nov 2016, Jeremie Courreges-Anglas wrote: > Senthil Kumar M writes: > > > Hello ports, > > > > HMMER is used for searching sequence databases for sequence homologs, > > and for making sequence alignments. It implements methods using > > probabilistic models called profile hidden Mar

NEW: math/py-bottleneck 1.2.0

2016-11-12 Thread Alexandr Shadchin
Hi, ok to import? DESCR: Bottleneck is a collection of fast NumPy array functions written in C. -- Alexandr Shadchin py-bottleneck.tgz Description: application/tar-gz

update devel/cargo to 0.14.0

2016-11-12 Thread Sebastien Marie
= 9f8c3a65f70b2a5723e0d9cc0a32d531ea42da67 # cargo version used for bootstrapping -BOOTSTRAP_VERSION =0.12.0-20160821 +BOOTSTRAP_VERSION =0.14.0-20161112 # registry index # see ${WRKDIR}/cargo-home/registry/index/github.com-${REGISTRY_INDEX} @@ -27,19 +25,15 @@ CATEGORIES =devel

Re: New: biology/hmmer

2016-11-12 Thread Jeremie Courreges-Anglas
Senthil Kumar M writes: > Hello ports, > > HMMER is used for searching sequence databases for sequence homologs, > and for making sequence alignments. It implements methods using > probabilistic models called profile hidden Markov models (profile > HMMs). (http://hmmer.org) > > The latest versio

Re: [NEW] www/tbb improved, updated

2016-11-12 Thread attila
[Sorry for duplicate email to anyone who got one, my bad -A] Landry Breuil writes: > On Wed, Nov 02, 2016 at 09:55:17AM -0600, attila wrote: n>> >> Landry Breuil writes: >> >> > On Tue, Oct 18, 2016 at 11:07:22AM -0500, attila wrote: >> >> >> >> attila writes: >> >> >> >> > attila writes:

Re: add py3 flavor for py-boto

2016-11-12 Thread Antoine Jacoutot
On Sat, Nov 12, 2016 at 06:35:56PM +0500, Alexandr Shadchin wrote: > On Fri, Nov 11, 2016 at 01:01:21PM +0100, Antoine Jacoutot wrote: > > On Fri, Nov 11, 2016 at 03:05:14PM +0500, Alexandr Shadchin wrote: > > > On Fri, Nov 11, 2016 at 10:46:16AM +0100, Antoine Jacoutot wrote: > > > > On Fri, Nov 1

Re: add py3 flavor for py-boto

2016-11-12 Thread Alexandr Shadchin
On Fri, Nov 11, 2016 at 01:01:21PM +0100, Antoine Jacoutot wrote: > On Fri, Nov 11, 2016 at 03:05:14PM +0500, Alexandr Shadchin wrote: > > On Fri, Nov 11, 2016 at 10:46:16AM +0100, Antoine Jacoutot wrote: > > > On Fri, Nov 11, 2016 at 02:43:51PM +0500, Alexandr Shadchin wrote: > > > > Add py3 flavo

Re: [update] lang/rust 1.13.0

2016-11-12 Thread Daniel Jakots
On Sat, 12 Nov 2016 10:00:45 +0100, Sebastien Marie wrote: > Here an update for lang/rust to 1.13.0 It's ok danj@ (I'm not really quick, I got premium access to the diff ;)). Cheers, Daniel