tion"
>>
>> 3. this process called "MPI_Abort" or "prte_abort" and the mca
>> parameter prte_create_session_dirs is set to false. In this case, the
>> run-time cannot detect that the abort call was an abnormal
>> termination. Hence, the only error
gt;
>
> 3. this process called "MPI_Abort" or "prte_abort" and the mca
>
> parameter prte_create_session_dirs is set to false. In this case, the
>
> run-time cannot detect that the abort call was an abnormal
>
> termination. Hence, the only error message you will receive is this
>
>
be
terminated by signals sent by prterun (as reported here).
You can avoid this message by specifying -quiet on the prterun command
line.
--
```
Best wishes,
Zongze
From: petsc-users on behalf of Klaij,
Christiaan via pet
iday, July 11, 2025 11:22 PM
To: Klaij, Christiaan
Cc: Junchao Zhang; PETSc users list
Subject: Re: [petsc-users] problem with nested logging, standalone example
And yet we cannot reproduce.
Please tell us the exact PETSc version and MPI implementation versions. And
reattach your reproduci
or error-out at the call to
> PetscLogView.
>
> Chris
>
>
> From: Klaij, Christiaan
> Sent: Friday, July 11, 2025 10:10 AM
> To: Barry Smith; Junchao Zhang
> Cc: PETSc users list
> Subject: Re: [petsc-users] problem with nested logging, standalone example
>
> @Matt:
her segfault, or hang or error-out at the call to
> PetscLogView.
>
> Chris
>
>
> From: Klaij, Christiaan
> Sent: Friday, July 11, 2025 10:10 AM
> To: Barry Smith; Junchao Zhang
> Cc: PETSc users list
> Subject: Re: [petsc-user
To: Barry Smith; Junchao Zhang
Cc: PETSc users list
Subject: Re: [petsc-users] problem with nested logging, standalone example
@Matt: no MPI errors indeed. I've tried with MPICH and I get the same hanging.
@Barry: both stack traces aren't exactly the same, see a sample with MPICH
bel
64/3.4.2/lib/libmpi.so.12
From: Barry Smith
Sent: Thursday, July 10, 2025 11:10 PM
To: Junchao Zhang
Cc: Klaij, Christiaan; PETSc users list
Subject: Re: [petsc-users] problem with nested logging, standalone example
I cannot reproduce
On Jul 10, 2025, at 3:46 PM, Junchao Z
qWtWbWHMIk_YNR8bJrOqapgp$>
>>
>> <https://urldefense.us/v3/__https://www.facebook.com/marin.wageningen__;!!G_uCfscf7eWS!cbfMf1uAUCQ_T756UiU6Vd_NZkAvFLYRqJzL47P2JiAVi_2KCG5Q1u2oHseUcGLNAIW5qWtWbWHMIk_YNR8bJoD4fuV7$>
>>
>>
>> <https://urldefense.us/v3/
!cbfMf1uAUCQ_T756UiU6Vd_NZkAvFLYRqJzL47P2JiAVi_2KCG5Q1u2oHseUcGLNAIW5qWtWbWHMIk_YNR8bJospHf95$
> >
> [image: YouTube]
> <https://urldefense.us/v3/__https://www.youtube.com/marinmultimedia__;!!G_uCfscf7eWS!cbfMf1uAUCQ_T756UiU6Vd_NZkAvFLYRqJzL47P2JiAVi_2KCG5Q1u2oHseUcGLNAI
__
> From: Matthew Knepley
> Sent: Thursday, July 10, 2025 1:37 PM
> To: Klaij, Christiaan
> Cc: Junchao Zhang; PETSc users list
> Subject: Re: [petsc-users] problem with nested logging, standalone example
>
> On Thu, Jul 10, 2025 at 4:39 AM Klaij, Christiaan v
Knepley
> Sent: Thursday, July 10, 2025 1:37 PM
> To: Klaij, Christiaan
> Cc: Junchao Zhang; PETSc users list
> Subject: Re: [petsc-users] problem with nested logging, standalone example
>
> On Thu, Jul 10, 2025 at 4:39 AM Klaij, Christiaan via petsc-users <
> petsc-users
ew Knepley
Sent: Thursday, July 10, 2025 1:37 PM
To: Klaij, Christiaan
Cc: Junchao Zhang; PETSc users list
Subject: Re: [petsc-users] problem with nested logging, standalone example
On Thu, Jul 10, 2025 at 4:39 AM Klaij, Christiaan via petsc-users
mailto:petsc-users@mcs.anl.gov>> wrote:
An
com/marin.wageningen__;!!G_uCfscf7eWS!bhLWmMB1f8WaSDbp9K4m6tdMiaSZUO0fz4wfjGqnmEpFXM6dyY0NHVQFP9Rbvo2D9gl117ZjcVyTiAmc0UAPFx4$>
> [image: LinkedIn]
> <https://urldefense.us/v3/__https://www.linkedin.com/company/marin__;!!G_uCfscf7eWS!bhLWmMB1f8WaSDbp9K4m6tdMiaSZUO0fz4wfjGqnmEpFXM6dyY0
ck trace...
Chris
From: Junchao Zhang
Sent: Tuesday, July 8, 2025 10:58 PM
To: Klaij, Christiaan
Cc: PETSc users list
Subject: Re: [petsc-users] problem with nested logging, standalone example
Hi, Chris,
First, I had to fix an error in your test by add
st
Subject: Re: [petsc-users] problem with nested logging, standalone example
Hi, Chris,
First, I had to fix an error in your test by adding "
PetscCallA(MatSetFromOptions(AA,ierr))" at line 254.
[0]PETSC ERROR: - Error Message
-
Hi, Chris,
First, I had to fix an error in your test by adding "
PetscCallA(MatSetFromOptions(AA,ierr))" at line 254.
[0]PETSC ERROR: - Error Message
--
[0]PETSC ERROR: Object is in wrong state
[0]PETSC ERROR: Mat ob
gt;
> From: Stefano Zampini
> Sent: Thursday, May 1, 2025 10:57 AM
> To: Klaij, Christiaan
> Cc: Randall Mackie; PETSc users list; Isaac, Toby
> Subject: Re: [petsc-users] problem with nested logging
>
>
>
> Il giorno gio 1 mag 2025
saac, Toby
Subject: Re: [petsc-users] problem with nested logging
If I deactivate all the calls to PetscLogEventBegin/End in the
simulation code, the error does not show-up.
But since there are more than 2500 events, it's impossible to do
them one-by-one, especially since the error shows-u
by
Subject: Re: [petsc-users] problem with nested logging
Il giorno gio 1 mag 2025 alle ore 11:38 Klaij, Christiaan
mailto:c.kl...@marin.nl>> ha scritto:
The checks seem to be in place: I do get a PETSC ERROR when I add a log event
on rank 0 as you suggested.
Ok, the broken logic may be
, Christiaan
Sent: Thursday, May 1, 2025 10:23 AM
To: Stefano Zampini
Cc: Randall Mackie; PETSc users list; Isaac, Toby
Subject: Re: [petsc-users] problem with nested logging
Was the rewritting by Toby done somewhere between petsc 3.19.4 (no problem) and
3.23.4 (problem)?
Chris
Il giorno gio 1 mag 2025 alle ore 11:23 Klaij, Christiaan
ha scritto:
> Was the rewritting by Toby done somewhere between petsc 3.19.4 (no
> problem) and 3.23.4 (problem)?
>
>
If I look at changelogs, I see many PetscLog related changes in
doc/changes/320.md, so I presume the answer is yes
; It shouldn't
> Chris
>
>
> From: Klaij, Christiaan
> Sent: Thursday, May 1, 2025 10:23 AM
> To: Stefano Zampini
> Cc: Randall Mackie; PETSc users list; Isaac, Toby
> Subject: Re: [petsc-users] problem with nested logging
>
> Was the rewritting by
mail.com>>
Sent: Tuesday, April 29, 2025 6:12 PM
To: Randall Mackie
Cc: Klaij, Christiaan; PETSc users list; Isaac, Toby
Subject: Re: [petsc-users] problem with nested logging
Can you try using -log_sync ? This should check every entry/exit points of
logged Events and complain if something is
___
> From: Stefano Zampini
> Sent: Tuesday, April 29, 2025 6:12 PM
> To: Randall Mackie
> Cc: Klaij, Christiaan; PETSc users list; Isaac, Toby
> Subject: Re: [petsc-users] problem with nested logging
>
> Can you try using -log_sync ? This shou
users@mcs.anl.gov<mailto:petsc-users@mcs.anl.gov>;
Isaac, Toby
Subject: Re: [petsc-users] problem with nested logging
You don't often get email from
rlmackie...@gmail.com<mailto:rlmackie...@gmail.com>. Learn why this is
important<https://urldefense.us/v3/__https:
4EdWRUoVqQW7s6Cw7FNelIQ$>
>
> <https://urldefense.us/v3/__https://www.youtube.com/marinmultimedia__;!!G_uCfscf7eWS!bW2X4VgowGOLrAASgbFOR_Mh6HW4HtWqrdtpsvpnpiFrIwki34JOGyih-h-1bvgb-Bh4EdWRUoVqQW7s6CwmfHQRog$>
>
> From: Randall Mackie
> Sent: Tuesday, April 29, 2025 3:33 PM
> To: Klaij, Christiaan
> Cc: Matthew K
QRog$
> >
> From: Randall Mackie
> Sent: Tuesday, April 29, 2025 3:33 PM
> To: Klaij, Christiaan
> Cc: Matthew Knepley; petsc-users@mcs.anl.gov; Isaac, Toby
> Subject: Re: [petsc-users] problem with nested logging
>
> You don't often get email from
laij, Christiaan
Cc: Matthew Knepley; petsc-users@mcs.anl.gov; Isaac, Toby
Subject: Re: [petsc-users] problem with nested logging
You don't often get email from rlmackie...@gmail.com. Learn why this is
important<https://urldefense.us/v3/__https://aka.ms/LearnAboutSenderIdentification__;!!
_uCfscf7eWS!fFq1daAFFpKhBA_NWU3sd2QJe_S44rklqeRi0TB57XI0nQsh9jgy8iw3JNGpBbd21zqvO3QlGTLa7kjgcpgQdSE$
> >
> [YouTube]<
> https://urldefense.us/v3/__https://www.youtube.com/marinmultimedia__;!!G_uCfscf7eWS!fFq1daAFFpKhBA_NWU3sd2QJe_S44rklqeRi0TB57XI0nQsh9jgy8iw3JNGpBbd21zqvO3QlGTLa7kjgn8qP6
error message.
Chris
From: Matthew Knepley
Sent: Tuesday, April 29, 2025 1:50 PM
To: Klaij, Christiaan
Cc: Junchao Zhang; petsc-users@mcs.anl.gov; Isaac, Toby
Subject: Re: [petsc-users] problem with nested logging
On Tue, Apr 29, 2025 at 6:50 AM
cf7eWS!eq1kivi8yzuD_s9lNwIeqkMg9dU4SC9grCBJnOhoALEg4iILbgybeYt5c__oPKrFt56W5KKM4Kab4GcxXOHk$
> >
> [image: YouTube]
> <https://urldefense.us/v3/__https://www.youtube.com/marinmultimedia__;!!G_uCfscf7eWS!eq1kivi8yzuD_s9lNwIeqkMg9dU4SC9grCBJnOhoALEg4iILbgybeYt5c__oPKrFt56W5KKM4Kab4AzBikZl$
> >
>
> From: Klaij, Christiaan
> Sent: Monda
suwIMz7Z8$
___
From: Klaij, Christiaan
Sent: Monday, April 28, 2025 3:53 PM
To: Matthew Knepley
Cc: Junchao Zhang; petsc-users@mcs.anl.gov; Isaac, Toby
Subject: Re: [petsc-users] problem with nested logging
Bisecting would be quite hard, it's not just the petsc version that changed,
also other l
ov; Isaac, Toby
Subject: Re: [petsc-users] problem with nested logging
You don't often get email from knep...@gmail.com. Learn why this is
important<https://urldefense.us/v3/__https://aka.ms/LearnAboutSenderIdentification__;!!G_uCfscf7eWS!ccB05YCuTjBD4s8PO77q6b1rOHXkATjqWr4Muuiu9DhyO9p8kHihED9
le, unfortunately.
>
We cannot replicate it here. Is there a chance you could bisect to see what
change is responsible?
Thanks,
Matt
> Chris
>
>
> From: Junchao Zhang
> Sent: Saturday, April 26, 2025 3:51 PM
> To: Klaij, Christia
-users@mcs.anl.gov; Isaac, Toby
Subject: Re: [petsc-users] problem with nested logging
You don't often get email from junchao.zh...@gmail.com. Learn why this is
important<https://urldefense.us/v3/__https://aka.ms/LearnAboutSenderIdentification__;!!G_uC
Toby (Cc'ed) might know it. Or could you provide an example?
--Junchao Zhang
On Fri, Apr 25, 2025 at 3:31 AM Klaij, Christiaan via petsc-users <
petsc-users@mcs.anl.gov> wrote:
> We recently upgraded from 3.19.4 to 3.22.4 but face the problem below with
> the nested logging. Any ideas?
>
> Chr
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