Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread akshar bhosale
hi, on your machine, is numpy.test passed? On Thu, Nov 3, 2011 at 6:54 AM, Olivier Delalleau wrote: > I believe they are optional, but I'm not sure. > > Note that this system I copied the distutils from is not one I setup > myself so I'm not sure how numpy was installed exactly. I just know it >

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread Olivier Delalleau
I believe they are optional, but I'm not sure. Note that this system I copied the distutils from is not one I setup myself so I'm not sure how numpy was installed exactly. I just know it works and it's using MKL :) It's an 8 core Intel(R) Xeon(R) CPU E5462 @ 2.80GHz (x86_64 as well). -=- Olivier

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread akshar bhosale
hi, are amd,fftw and umfpack required? my architecture is : intel xeon x_86_64. On Thu, Nov 3, 2011 at 6:30 AM, Olivier Delalleau wrote: > It's inside the distutils folder. > > -=- Olivier > > 2011/11/2 akshar bhosale > >> thanks..what about site.cfg? >> >> On Thu, Nov 3, 2011 at 1:27 AM, Olivi

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread Olivier Delalleau
It's inside the distutils folder. -=- Olivier 2011/11/2 akshar bhosale > thanks..what about site.cfg? > > On Thu, Nov 3, 2011 at 1:27 AM, Olivier Delalleau wrote: > >> Sorry, no clue :/ >> >> I made a tarball with my distutils folder here: >> http://www.iro.umontreal.ca/~delallea/tmp/distutils

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread akshar bhosale
thanks..what about site.cfg? On Thu, Nov 3, 2011 at 1:27 AM, Olivier Delalleau wrote: > Sorry, no clue :/ > > I made a tarball with my distutils folder here: > http://www.iro.umontreal.ca/~delallea/tmp/distutils.tar.bz2 > Hope this helps... > > -=- Olivier > > 2011/11/2 akshar bhosale > >> hi,

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread Olivier Delalleau
Sorry, no clue :/ I made a tarball with my distutils folder here: http://www.iro.umontreal.ca/~delallea/tmp/distutils.tar.bz2 Hope this helps... -=- Olivier 2011/11/2 akshar bhosale > hi, > thanks for the reply > none of them is linked with libmkl_lapack.so. > what can be the problem? > libmkl

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread akshar bhosale
hi, thanks for the reply none of them is linked with libmkl_lapack.so. what can be the problem? libmkl_lapack.so is present in its location. if possible, can you send your site.cfg and other related files like intelccompilers.py / system_config.py etc...and configure/build options, i will try the

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread Olivier Delalleau
Hmm that's interesting, it's not linked against libmkl_lapack. On my system with MKL it says: ldd linalg/lapack_lite.so libmkl_lapack.so => /opt/intel/mkl/ 10.1.3.027/lib/em64t/libmkl_lapack.so (0x2acf0e25a000) libmkl_intel_lp64.so => /opt/intel/mkl/ 10.1.3.027/lib/em64t/libmkl

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread akshar bhosale
Hi, ldd Python-2.6/lib/python2.6/site-packages/numpy/linalg/lapack_lite.so libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x2b1199349000) libmkl_def.so => /opt/intel/Compiler/11.0/069/mkl/lib/em64t/libmkl_def.so (0x2b1199653000) libmkl_intel_lp64.so => /opt/intel/Compiler/11.0/06

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread Olivier Delalleau
Doh I'm sorry, I forgot the problem was with lapack, what about ldd numpy/linalg/lapack_lite.so? 2011/11/2 akshar bhosale > Hi, > ldd _dotblas.so > libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x2b12f0692000) > libmkl_def.so => > /opt/intel/Compiler/11.0/069/mkl/lib/em64t/libmkl_def.so >

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread akshar bhosale
Hi, ldd _dotblas.so libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x2b12f0692000) libmkl_def.so => /opt/intel/Compiler/11.0/069/mkl/lib/em64t/libmkl_def.so (0x2b12f099c000) libmkl_intel_lp64.so => /opt/intel/Compiler/11.0/069/mkl/lib/em64t/libmkl_intel_lp64.so (0x2b12f14f1000)

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread Olivier Delalleau
Ok, can you print the output of ldd numpy/core/_dotblas.so? -=- Olivier 2011/11/2 akshar bhosale > HI, > It is already added in the LD_LIBRARY_PATH, thenalso it is generating the > same error. > > > On Wed, Nov 2, 2011 at 10:01 PM, Olivier Delalleau wrote: > >> Locate your libmkl_lapack.so and

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread akshar bhosale
HI, It is already added in the LD_LIBRARY_PATH, thenalso it is generating the same error. On Wed, Nov 2, 2011 at 10:01 PM, Olivier Delalleau wrote: > Locate your libmkl_lapack.so and try to add the directory that contains it > to your LD_LIBRARY_PATH environment variable. > > -=- Olivier > > 201

Re: [Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread Olivier Delalleau
Locate your libmkl_lapack.so and try to add the directory that contains it to your LD_LIBRARY_PATH environment variable. -=- Olivier 2011/11/2 akshar bhosale > Hi, > > i am getting following error. >python -c 'import numpy;numpy.matrix([[1, 5, 10], [1.0, 3j, 4]], >numpy.complex128).T.I.

[Numpy-discussion] numpy error with mkl 10.1

2011-11-02 Thread akshar bhosale
Hi, i am getting following error. python -c 'import numpy;numpy.matrix([[1, 5, 10], [1.0, 3j, 4]], numpy.complex128).T.I.H' MKL FATAL ERROR: Cannot load libmkl_lapack.so have installed numpy 1.6.0 with python 2.6. i have intel cluster toolkit installed on my system. (11/069 version