the last entries in the dataframe, how do they look? On Tue, May 25, 2010 at 6:12 PM, Changbin Du <[email protected]> wrote:
> 644727344 ABC-2 type transporter ABC-2 type transporter > 644727345 conserved hypothetical protein conserved hypothetical > protein > > Here is the last two lines of the file id_name_gh5.txt. > > > > On Tue, May 25, 2010 at 8:57 AM, David Winsemius <[email protected] > >wrote: > > > > > On May 25, 2010, at 11:42 AM, Changbin Du wrote: > > > > HI, Dear R community, > >> > >> My original file has 1932 lines, but when I read into R, it changed to > >> 1068 > >> lines, how comes? > >> > > > > We are being asked to investigate this quest, how? > > > > Have you looked at the last line to see if it looks like gene_name? > > > > Isn't this isomorphic to genetics questions? What sort of mutation is it? > > Deletion? Abnormal stop codon? Figure out where the transcription process > > went wrong. This sort of analysis would appear to be right up the alley > of > > someone doing genetics. > > > > > > > >> > >> c...@nuuk:~/operon$ wc -l id_name_gh5.txt > >> 1932 id_name_gh5.txt > >> > >> > >> gene_name<-read.table("/home/cdu/operon/id_name_gh5.txt", sep="\t", > >>> > >> skip=0, header=F, fill=T) > >> > >>> dim(gene_name) > >>> > >> [1] 1068 3 > >> > >> > >> -- > >> > > > > > > David Winsemius, MD > > West Hartford, CT > > > > > > > -- > Sincerely, > Changbin > -- > > [[alternative HTML version deleted]] > > ______________________________________________ > [email protected] mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > -- Joris Meys Statistical Consultant Ghent University Faculty of Bioscience Engineering Department of Applied mathematics, biometrics and process control Coupure Links 653 B-9000 Gent tel : +32 9 264 59 87 [email protected] ------------------------------- Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php [[alternative HTML version deleted]] ______________________________________________ [email protected] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
