Have you compared them to
tail(gene)_name, 2)
Come on, man, show some initiative.
On May 25, 2010, at 12:12 PM, Changbin Du wrote:
> 644727344 ABC-2 type transporter ABC-2 type transporter
> 644727345 conserved hypothetical protein conserved
> hypothetical protein
>
> Here is the last two lines of the file id_name_gh5.txt.
>
>
>
> On Tue, May 25, 2010 at 8:57 AM, David Winsemius <dwinsem...@comcast.net
> > wrote:
>
> On May 25, 2010, at 11:42 AM, Changbin Du wrote:
>
> HI, Dear R community,
>
> My original file has 1932 lines, but when I read into R, it changed
> to 1068
> lines, how comes?
>
> We are being asked to investigate this quest, how?
>
> Have you looked at the last line to see if it looks like gene_name?
>
> Isn't this isomorphic to genetics questions? What sort of mutation
> is it? Deletion? Abnormal stop codon? Figure out where the
> transcription process went wrong. This sort of analysis would
> appear to be right up the alley of someone doing genetics.
>
>
>
>
> c...@nuuk:~/operon$ wc -l id_name_gh5.txt
> 1932 id_name_gh5.txt
>
>
> gene_name<-read.table("/home/cdu/operon/id_name_gh5.txt", sep="\t",
> skip=0, header=F, fill=T)
> dim(gene_name)
> [1] 1068 3
>
>
> --
>
>
> David Winsemius, MD
> West Hartford, CT
>
>
>
>
> --
> Sincerely,
> Changbin
> --
>
>
>
David Winsemius, MD
West Hartford, CT
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