On Jul 20, 2009, at 6:43 PM, Andrej Kastrin wrote:
Check out qpcR package.
Andrej
gauravbhatti wrote:
Hi I need help since I have never worked on RT PCR data before . I
have 8
data files each corresponding to a single pcr run. Each file also
represent
10 samples(5 cancer and 5 healthy) belonging to a unique gene. I
have 7
unique genes and 1 reference (total 8 files). Can any body help me
with
preproceesing and normalization?
Also, try asking this question again on the bioconductor list, as
you'll likely find a higher density of people there doing related work.
Some other packages that might help:
* http://bioconductor.org/packages/2.4/bioc/html/qpcrNorm.html
* http://bioconductor.org/packages/2.4/bioc/html/SLqPCR.html
-steve
--
Steve Lianoglou
Graduate Student: Physiology, Biophysics and Systems Biology
Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact
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