Probably better asked on the BioC list.

On Apr 21, 2009, at 11:40 AM, Selena Niu wrote:

Has anyone analyzed Illumina 550K data using DNAcopy package? I have around
2300 samples. According to
Venkatraman and Olshen 2007 paper, it needs about 25 min to run a single sample for Affymetrix 100K. I am afraid it will take too long to analyzed my
data. Anybody has an idea? Thanks!

David Winsemius, MD
Heritage Laboratories
West Hartford, CT

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