Dear Thomas Yes, you're right. But I'm looking for this not only for computational cost reasons. eigen function from R has identical behavior to matlab function eig, but not to eigs. Even in matlab you can check that those function are not giving identical results. Here you have a short example : Suppose we have given a matrix M M =
1.2607 -3.5575 2.2968 0 0 0 -3.5575 10.1429 -6.5855 0 0 0 2.2968 -6.5855 4.2887 0 0 0 0 0 0 2.6359 -4.8489 2.2130 0 0 0 -4.8489 8.9217 -4.0728 0 0 0 2.2130 -4.0728 1.8598 For eig (R's eigen)we have: [V,eiggg]=eig(M); V = 0.5774 0 0 -0.7663 0 0.2820 0.5774 0 0 0.1389 0 -0.8046 0.5774 0 0 0.6273 0 0.5226 0 0.5774 -0.6857 0 0.4432 0 0 0.5774 -0.0410 0 -0.8155 0 0 0.5774 0.7267 0 0.3723 0 eiggg = -0.0000 0 0 0 0 0 0 -0.0000 0 0 0 0 0 0 0.0011 0 0 0 0 0 0 0.0252 0 0 0 0 0 0 13.4163 0 0 0 0 0 0 15.6671 And for matlab's eigs we have: [Y,eigenvals] = eigs(M,4,0,options) ; Y = -0.8147 -0.0106 -0.0000 -0.5774 0.3802 -0.0143 -0.0000 -0.5774 0.4344 0.0249 0.0000 -0.5774 -0.0332 0.6871 -0.5774 0.0000 0.0430 0.0379 -0.5774 0.0000 -0.0098 -0.7250 -0.5774 0.0000 eigenvals = 0.0331 0 0 0 0 0.0011 0 0 0 0 0.0000 0 0 0 0 -0.0000 As you can see, columns of chosen eigenvectors are different. I'm looking for function similar to eigs in R. I'll try with svd, which you have mentioned. Thank you for that idea, maybe it will be what i'm looking for. Kayteck -- View this message in context: http://www.nabble.com/matlab-eigs-function-in-R-tp17619641p17629655.html Sent from the R help mailing list archive at Nabble.com. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.