Presumably the original poster was looking for a function that would compute 
just the largest five eigenvalues and associated vectors, because that is 
enormously more efficient for a large matrix than computing all of them.

eigen() computes all of them.

One way to compute just a few is to use svd(), where you can specify the number 
of left and right singular vectors to compute.

       -thomas


On Tue, 3 Jun 2008, David Winsemius wrote:

"Jorge Ivan Velez" <[EMAIL PROTECTED]> wrote in
news:[EMAIL PROTECTED]:

Dear kayteck,

Function eigen (see ?eigen) will do what you want.

HTH,

He had looked, but since eigen returns both eigenvalues and
eigenvectors, and does so in a list, perhaps he needs advice about how
to extract his values from the list structure.

x <- matrix(c(1:5, (1:5)^2, (1:5)^(1/2), 0,0,0,1,0, 0,0,0,0,1),5, 5)

str(eigen(x))
#List of 2
# $ values : cplx [1:5] 7.43+0i 1.00+0i 1.00+0i ...
# $ vectors: cplx [1:5, 1:5] 0.0699+0i 0.1600+0i 0.2894+0i ...

d <- 3

eigen(x)$values[1:d]

[1] 7.431675+0i 1.000000+0i 1.000000+0i

#no need to sort since eigen does that by default.

Not sure we can help him out regarding the "slight difference" btwn
Matlab values and R values due to the unnecessary vagueness of his
concern.

--
David Winsemius



Jorge


On Tue, Jun 3, 2008 at 5:42 AM, kayteck_master
<[EMAIL PROTECTED]> wrote:


Hello

Does anybody know how one can compute d largest
eigenvalues/eigenvectors in R, like in MATLAB eigs function ? eigen
function computes all eigenvectors/eigenvalues, and they are
slightly different than those generated by matlab eigs.

Thanks in advance
--



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Thomas Lumley                   Assoc. Professor, Biostatistics
[EMAIL PROTECTED]       University of Washington, Seattle

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