I manage to install the package. But I cant load it now.
It says:
library(CGHcall)
Loading required package: impute
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared library
'/nfs/users/nfs_s/st5/R-modules/impute/libs/impute.so':
libgfortran.so.1: cannot open shared object file: No such file or
directory
In addition: Warning messages:
1: package 'CGHcall' was built under R version 2.11.1
2: package 'impute' was built under R version 2.11.1
Error: package 'impute' could not be loaded
What is going wrong?
Best,
salih
On Wed, Jun 8, 2011 at 3:52 PM, Salih Tuna <saliht...@gmail.com> wrote:
> Hi,
>
> I am trying to install the impute package in unix. but I get the
> following error message. I followed the following steps. Do you know what is
> causing this and how I can solve this problem?
>
> source("http://www.bioconductor.org/biocLite.R";)
> biocLite("impute")
>
> Using R version 2.11.1, biocinstall version 2.6.10.
>
> Installing Bioconductor version 2.6 packages:
>
> [1] "impute"
>
> Please wait...
>
>
>
> Warning in install.packages(pkgs = pkgs, repos = repos, ...) :
>
> argument 'lib' is missing: using '/nfs/users/nfs_s/st5/R-modules'
>
> trying URL 'http://cran.ma.imperial.ac.uk/src/contrib/impute_1.26.0.tar.gz
> '
>
> Content type 'application/x-gzip' length 1191531 bytes (1.1 Mb)
>
> opened URL
>
> ==================================================
>
> downloaded 1.1 Mb
>
>
>
> ERROR: failed to lock directory â/nfs/users/nfs_s/st5/R-modulesâ for
> modifying
>
> Try removing â/nfs/users/nfs_s/st5/R-modules/00LOCKâ
>
>
>
> The downloaded packages are in
>
> â/tmp/RtmpgJur79/downloaded_packagesâ
>
> Warning message:
>
> In install.packages(pkgs = pkgs, repos = repos, ...) :
>
> installation of package 'impute' had non-zero exit status
>
>
>
>
>
> best,
>
> salih
>
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