Hi,
I am trying to install the impute package in unix. but I get the
following error message. I followed the following steps. Do you know what is
causing this and how I can solve this problem?
source("http://www.bioconductor.org/biocLite.R";)
biocLite("impute")
Using R version 2.11.1, biocinstall version 2.6.10.
Installing Bioconductor version 2.6 packages:
[1] "impute"
Please wait...
Warning in install.packages(pkgs = pkgs, repos = repos, ...) :
argument 'lib' is missing: using '/nfs/users/nfs_s/st5/R-modules'
trying URL 'http://cran.ma.imperial.ac.uk/src/contrib/impute_1.26.0.tar.gz'
Content type 'application/x-gzip' length 1191531 bytes (1.1 Mb)
opened URL
==================================================
downloaded 1.1 Mb
ERROR: failed to lock directory â/nfs/users/nfs_s/st5/R-modulesâ for
modifying
Try removing â/nfs/users/nfs_s/st5/R-modules/00LOCKâ
The downloaded packages are in
â/tmp/RtmpgJur79/downloaded_packagesâ
Warning message:
In install.packages(pkgs = pkgs, repos = repos, ...) :
installation of package 'impute' had non-zero exit status
best,
salih
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