Yay! I re-installed everything and got through "Make distribution"!
I have one more question, please: I am running the make check-all. I have an error at reg-1d. It stops the process. However, the mean difference (as per the file) is 2.0e-12. I'm ok with that. How do I bypass this, please? Thanks, Erin Erin Hodgess, PhD mailto: erinm.hodg...@gmail.com On Wed, Feb 27, 2019 at 10:22 PM Avraham Adler <avraham.ad...@gmail.com> wrote: > I believe that repo just follows the directions on my blog. Without seeing > Dr. Hodges’s code, my initial concern is the many references to Cygwin. My > method specifically does not use Cygwin but MSYS2 and Mingw64/Rtools35. > That will likely change to solely Rtools40 once R3.6 is released due to the > Msys system being built in to it. > > There may be some library conflicts between Cygwin and msys2/mingw64. If > possible, my suggestion would be uninstall everything and then just install > msys2 (and add in make after you to the first msys update) and rtools35. > Then there should be no conflicting libraries. > > Thanks, > > Avi > > On Thu, Feb 28, 2019 at 12:11 AM Kenny Bell <kmbel...@gmail.com> wrote: > >> This person has had apparent success - you could follow what they did or >> just download their product (with appropriate caution downloading a random >> .exe). >> >> https://github.com/thequackdaddy/R-OpenBLAS >> >> On Thu, Feb 28, 2019 at 6:28 AM Erin Hodgess <erinm.hodg...@gmail.com> >> wrote: >> >> > Hello! >> > >> > I'm not sure if this is the right place to post this, so apologies >> > in advance if I'm not in the right list. >> > >> > I downloaded the OpenBLAS and am following Avraham Adler's great >> > instructions. However, when I run make, things go well to a certain >> point, >> > and then go bad: >> > >> > make >> > [snip] >> > >> > touch cygopenblas_haswellp-r0.3.5.a >> > make -j 1 -C test all >> > make[1]: Entering directory >> > '/home/erinm/OPB_HOME/xianyi-OpenBLAS-eebc189/test' >> > gfortran -O2 -Wall -frecursive -m64 -mavx2 -o sblat1 sblat1.o >> > ../cygopenblas_haswellp-r0.3.5.a -L/usr/lib/gcc/x86_64-pc-msys/7.3.0 >> > >> -L/usr/lib/gcc/x86_64-pc-msys/7.3.0/../../../../x86_64-pc-msys/lib/../lib >> > -L/usr/lib/../lib >> > -L/usr/lib/gcc/x86_64-pc-msys/7.3.0/../../../../x86_64-pc-msys/lib >> > -L/usr/lib/w32api -lmsys-2.0 >> > D:/msys64/usr/lib/../lib/libpthread.a(t-d001088.o):fake:(.text+0x2): >> > undefined reference to `__imp_pthread_mutex_destroy' >> > D:/msys64/usr/lib/../lib/libpthread.a(t-d001090.o):fake:(.text+0x2): >> > undefined reference to `__imp_pthread_mutex_init' >> > D:/msys64/usr/lib/../lib/libpthread.a(t-d001091.o):fake:(.text+0x2): >> > undefined reference to `__imp_pthread_mutex_lock' >> > D:/msys64/usr/lib/../lib/libpthread.a(t-d001094.o):fake:(.text+0x2): >> > undefined reference to `__imp_pthread_mutex_trylock' >> > D:/msys64/usr/lib/../lib/libpthread.a(t-d001095.o):fake:(.text+0x2): >> > undefined reference to `__imp_pthread_mutex_unlock' >> > collect2.exe: error: ld returned 1 exit status >> > make[1]: *** [Makefile:134: sblat1] Error 1 >> > make[1]: Leaving directory >> > '/home/erinm/OPB_HOME/xianyi-OpenBLAS-eebc189/test' >> > make: *** [Makefile:124: tests] Error 2 >> > >> > >> > I think it has something to do with the threads/pthreads but am not sure >> > how to fix it. Any suggestions much appreciated. >> > >> > Thanks, >> > Sincerely, >> > Erin >> > >> > Erin Hodgess, PhD >> > mailto: erinm.hodg...@gmail.com >> > >> > [[alternative HTML version deleted]] >> > >> > ______________________________________________ >> > R-devel@r-project.org mailing list >> > https://stat.ethz.ch/mailman/listinfo/r-devel >> > >> >> [[alternative HTML version deleted]] >> >> ______________________________________________ >> R-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-devel >> > -- > Sent from Gmail Mobile > [[alternative HTML version deleted]] ______________________________________________ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
