Hi everyone, I am trying to install kernlab package, but failed many times by now on CentOS 6 operating system. FYI, I have no problem with this package installation on windows platform.
Here is the error message: trying URL 'http://cran.wustl.edu/src/contrib/kernlab_0.9-18.tar.gz' Content type 'application/x-gzip' length 1069148 bytes (1.0 Mb) opened URL ================================================== downloaded 1.0 Mb * installing *source* package âkernlabâ ... ** package âkernlabâ successfully unpacked and MD5 sums checked ** libs g++ -I/n/sw/R-3.0.1_gcc-4.7.2/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c brweight.cpp -o brweight.o In file included from /n/sw/gcc-4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/bits/localefwd.h:42:0, from /n/sw/gcc-4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/ios:42, from /n/sw/gcc-4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/ostream:40, from /n/sw/gcc-4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/iostream:40, from errorcode.h:43, from brweight.h:43, from brweight.cpp:42: /n/sw/gcc-4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/x86_64-unknown-linux-gnu/bits/c++locale.h:53:23: error: âuselocaleâ was not declared in this scope /n/sw/gcc-4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/x86_64-unknown-linux-gnu/bits/c++locale.h:53:45: error: invalid type in declaration before â;â token /n/sw/gcc-4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/x86_64-unknown-linux-gnu/bits/c++locale.h: In function âint std::__convert_from_v(__locale_struct* const&, char*, int, const char*, ...)â: /n/sw/gcc-4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/x86_64-unknown-linux-gnu/bits/c++locale.h:76:53: error: â__gnu_cxx::__uselocaleâ cannot be used as a function /n/sw/gcc-4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/x86_64-unknown-linux-gnu/bits/c++locale.h:101:33: error: â__gnu_cxx::__uselocaleâ cannot be used as a function make: *** [brweight.o] Error 1 ERROR: compilation failed for package âkernlabâ * removing â/n/home09/wang/R/x86_64-unknown-linux-gnu-library/3.0/kernlabâ The downloaded source packages are in â/scratch/tmp/Rtmpt52VjR/downloaded_packagesâ Warning message: In install.packages("kernlab") : installation of package âkernlabâ had non-zero exit status I found out online that many others also failed installing kernlab on linux, but no explicit unique solutions for this problem. What I have tried so far are: 1) change cran mirrors 2) using command line directly: R CMD INSTALL kernlab_0.9-18.tar.gz, after downloading the package 3) reset working directory Unfortunately, none of these solved my problem... Any suggestions are highly appreciated! -- View this message in context: http://r.789695.n4.nabble.com/Failed-to-install-kernlab-package-tp4679652.html Sent from the R devel mailing list archive at Nabble.com. ______________________________________________ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
