On 06.06.2011 15:30, Stefan McKinnon Høj-Edwards wrote:
Hello,
I am trying to run "RCMD check" on a package. It performs OK, with the
exception of a single warning:
* checking package vignettes in 'inst/doc' ... WARNING
Package vignette(s) without corresponding PDF:
AnnotationFuncsUserguide.Rnw
R CMD build should build the vignettes. If it did not succeed, see its
output for details.
Uwe Ligges
As I understand the problem, the vignette is not built. However, I have no
problems in doing so manually.
How do I fix this problem? I cannot find any logs for building the vignette,
however the output from building the pdf-file of the manual is found in the
.Rcheck folder.
On a similar note, as my vignette includes a biblio, I have to run "latex"
twice to get the citations referenced properly with a number. Is this an issue? How can I
work around it? (The package is submitted to BioC, so there might be other rules there?)
Thank you in advanced.
Yours sincerely,
Stefan McKinnon Høj-Edwards Dept. of Genetics and Biotechnology
PhD student Faculty of Agricultural Sciences
[email protected] Aarhus University
Tel.: +45 8999 1291 Blichers Allé 20, Postboks 50
Web: www.iysik.com DK-8830 Tjele
Tel.: +45 8999 1900
Web: www.agrsci.au.dk
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