Dear Dr. Adams, It works fine now, with thf fix you provided. R error messages are rather cryptic!
Thanks a lot! Warmest regards, Em sáb., 9 de mar. de 2024 às 18:02, Adams, Dean [EEOB] <[email protected]> escreveu: > For reasons due to CRAN becoming more stringent with S3-type function > calls, we needed to change the plot.param to: > > > > plot_param … (the previous no looks for an object or function called > ‘param’). > > > > Dean > > > > Dr. Dean C. Adams > > Distinguished Professor of Evolutionary Biology > > Department of Ecology, Evolution, and Organismal Biology > > Iowa State University > > https://faculty.sites.iastate.edu/dcadams/ > > phone: 515-294-3834 > > > > *From:* [email protected] <[email protected]> *On > Behalf Of *Mauro Cavalcanti > *Sent:* Saturday, March 9, 2024 2:52 PM > *To:* Morphmet <[email protected]> > *Subject:* [MORPHMET2] Error attempting running 'plotAllSpecimens()' > function in geomorph R package > > > > Dear ALL, > > > > I have been getting an error when attempting to run function > plotAllSpecimens() in geomorph R. package version 4.0.7 (the latest). The > error appears when I attempt to pass a list of parameters to customize the > plot. > > > > I tried the following: > > > > data(plethodon) > > Y.gpa<-gpagen(plethodon$land, print.progress = FALSE) > > plotAllSpecimens(Y.gpa$coords,links=plethodon$links,label=TRUE, plot.param > = list(pt.bg = "green", mean.cex=1, link.col="red", txt.pos=3, txt.cex=1)) > > > > The error message below is displayed: > > > > Error in plotAllSpecimens(Y.gpa$coords, links = plethodon$links, label = > TRUE, : > > unused argument (plot.param = list(pt.bg = "green", mean.cex = 1, link.col > = "red", txt.pos = 3, txt.cex = 1)) > > > > Looking quickly at the function source, I could not discern any obvious > problems. > > > > I am currently running R version 4.3.2 and get the warming messages below > when loading geomorph and associated packages: > > > > Warning messages: > > 1: package ‘geomorph’ was built under R version 4.3.3 > > 2: package ‘rgl’ was built under R version 4.3.3 > > > > Could someone out there provide some hints on how to solve this problem? > > > > Thanks in advance! > > > > With best regards, > > > > -- > > Dr. Mauro J. Cavalcanti > E-mail: [email protected] > Web: https://github.com/maurobio > "Life is complex. It consists of real and imaginary parts." > > -- > You received this message because you are subscribed to the Google Groups > "Morphmet" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion on the web visit > https://groups.google.com/d/msgid/morphmet2/CAC1JhZbXtN1tU48WgoNu45TbmM6Nmejz3PpSbB_CjMju0ejqRA%40mail.gmail.com > <https://groups.google.com/d/msgid/morphmet2/CAC1JhZbXtN1tU48WgoNu45TbmM6Nmejz3PpSbB_CjMju0ejqRA%40mail.gmail.com?utm_medium=email&utm_source=footer> > . > -- Dr. Mauro J. Cavalcanti E-mail: [email protected] Web: https://github.com/maurobio "Life is complex. It consists of real and imaginary parts." -- You received this message because you are subscribed to the Google Groups "Morphmet" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/morphmet2/CAC1JhZbZNYKAV-12h%3DsFFeQG%2B5HUjG0TW4P8sO5YfgLKNTmWmg%40mail.gmail.com.
