On Sunday, 27 July 2025 13:18:34 British Summer Time gevisz wrote:
> On July 25, 2025 my custom keyboard layout files located
> in /usr/share/X11/xkb/symbols/ were unexpectedly overwritten
> during system despite the fact that they were config-protected:
> # emerge --info | grep CONFIG_PROTECT
> CONFIG_PROTECT="/etc /usr/share/X11/xkb/symbols/ /usr/share/config
> /usr/share/gnupg/qualified.txt"
> CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d
> /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release
> /etc/revdep-rebuild /etc/sandbox.d /etc/texmf/language.dat.d
> /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
> 
> ChatGPT says to me that it was done when
> x11-misc/xkeyboard-config-2.45-r1 was updated.
> 
> I do not use etc-update or dispatch-conf, and there were no ._cfg*
> files left behind — the overwrite happened silently.
> 
> After examining the ebuild, ChatGPT noticed that src_install() uses
> meson_src_install,
> and then moves the entire installed /usr/share/X11/xkb tree to
> /usr/share/X11/xkb.workaround/
> as a workaround for bug #957712. In pkg_preinst(), that tree is then
> forcibly moved back to /usr/share/X11/xkb, overwriting any existing
> files.
> 
> This manual move bypasses Portage’s CONFIG_PROTECT mechanism entirely,
> as pkg_preinst()
> runs before Portage has a chance to apply config file protection.
> 
> While I understand the intention behind the workaround, the result was
> a total loss of my custom layout files,
> despite explicitly protecting the directory. I’ve been using Gentoo
> for 12 years, and I have never been so
> disappointed by the Gentoo as I was when this happened to say the least.
> 
> Is there a Gentoo-compliant way to preserve customized layouts that
> replace system-provided ones under such circumstances?
> 
> Thanks in advance for any suggestions or guidance.

The offending lines in /var/db/repos/gentoo/x11-misc/xkeyboard-config/
xkeyboard-config-2.45-r1.ebuild are:
====================================
...
 68 src_install() {
 69         meson_src_install
 70 
 71         # Workaround for portage's collision checks, see pkg_preinst (bug 
#957712)
 72         mv "${ED}"/usr/share/X11/xkb{,.workaround} || die
 73 }
 74 
 75 pkg_preinst() {  76         # Avoid touching EROOT if not needed, and use 
-f just-in-case anyway
 77         if [[ -d ${EROOT}/usr/share/X11/xkb && ! -L ${EROOT}/usr/share/
X11/xkb ]]; then
 78                 rm -rf "${EROOT}"/usr/share/X11/xkb || die
 79         fi
 80         mv "${ED}"/usr/share/X11/xkb{.workaround,} || die
 81 }
==============

I suggest you re-open this bug[1], because its workaround may have been 
somewhat inconsiderate as to potential impacts.

However, unlike files in /etc/ subdirectories, files under /usr/share/ are 
generally expected to be overwritten by package updates.  I see the wiki[2] 
suggests to create/edit files in place for custom keyboard layouts, but I 
wonder if it would have been safer for a symlink pointing to /etc where custom 
xkb config files could be stored more safely.

[1] https://bugs.gentoo.org/957712
[2] https://wiki.gentoo.org/wiki/Keyboard_layout_switching

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