commit: eb11c042a4a47b6b4ba249ab1e41e4117e51e21d Author: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org> AuthorDate: Tue Apr 25 11:30:38 2023 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org> CommitDate: Tue Apr 25 11:30:38 2023 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=eb11c042
sci-biology/trans-abyss: treeclean Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org> profiles/package.mask | 1 - sci-biology/trans-abyss/metadata.xml | 15 ---------- sci-biology/trans-abyss/trans-abyss-2.0.1.ebuild | 35 ------------------------ 3 files changed, 51 deletions(-) diff --git a/profiles/package.mask b/profiles/package.mask index a8da49349..20d20abc8 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -33,4 +33,3 @@ # Andrew Ammerlaan <[email protected]) (12 Jan 2023) # Needs bump of PYTHON_COMPAT to at least python3_10 sci-biology/chiron -sci-biology/trans-abyss diff --git a/sci-biology/trans-abyss/metadata.xml b/sci-biology/trans-abyss/metadata.xml deleted file mode 100644 index 079fb5aae..000000000 --- a/sci-biology/trans-abyss/metadata.xml +++ /dev/null @@ -1,15 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="person"> - <email>[email protected]</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>[email protected]</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">bcgsc/transabyss</remote-id> - </upstream> -</pkgmetadata> diff --git a/sci-biology/trans-abyss/trans-abyss-2.0.1.ebuild b/sci-biology/trans-abyss/trans-abyss-2.0.1.ebuild deleted file mode 100644 index cf10dd3b9..000000000 --- a/sci-biology/trans-abyss/trans-abyss-2.0.1.ebuild +++ /dev/null @@ -1,35 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python3_{7,8,9} ) - -inherit python-r1 - -DESCRIPTION="Analyze and combine multiple assemblies from abyss" -HOMEPAGE="https://www.bcgsc.ca/resources/software/trans-abyss"; -SRC_URI="https://github.com/bcgsc/transabyss/archive/${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="GPL-3" -SLOT="0" -KEYWORDS="~amd64 ~x86" - -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -DEPEND="${PYTHON_DEPS} - dev-lang/perl - dev-python/python-igraph[${PYTHON_USEDEP}] - sci-biology/abyss - sci-biology/blat -" -RDEPEND="${DEPEND}" - -S="${WORKDIR}/transabyss-${PV}" - -src_install() { - einstalldocs - python_foreach_impl python_domodule utilities - dobin transabyss - dobin transabyss-merge -}
