commit: 2d2c3a2f74c6633b68cdfad591123bdc24d10935 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Mon Mar 24 00:33:10 2014 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Mon Mar 24 00:33:10 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=2d2c3a2f
sci-biology/sickle: new package --- sci-biology/sickle/ChangeLog | 11 +++++++++++ sci-biology/sickle/metadata.xml | 9 +++++++++ sci-biology/sickle/sickle-9999.ebuild | 25 +++++++++++++++++++++++++ 3 files changed, 45 insertions(+) diff --git a/sci-biology/sickle/ChangeLog b/sci-biology/sickle/ChangeLog new file mode 100644 index 0000000..bdbc7e7 --- /dev/null +++ b/sci-biology/sickle/ChangeLog @@ -0,0 +1,11 @@ +# ChangeLog for sci-biology/sickle +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*sickle-9999 (24 Mar 2014) + + 24 Mar 2014; Martin Mokrejs <[email protected]> + +sickle-9999.ebuild, +metadata.xml: + simple ebuild, bundled Makefile forces compile flags, program version, but + works + diff --git a/sci-biology/sickle/metadata.xml b/sci-biology/sickle/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/sickle/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/sickle/sickle-9999.ebuild b/sci-biology/sickle/sickle-9999.ebuild new file mode 100644 index 0000000..46f0e91 --- /dev/null +++ b/sci-biology/sickle/sickle-9999.ebuild @@ -0,0 +1,25 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit eutils git-r3 + +DESCRIPTION="Windowed adaptive adaptor trimming tool for FASTQ data from Illumina/Solexa" +HOMEPAGE="https://github.com/najoshi/sickle"; +EGIT_REPO_URI="https://github.com/najoshi/sickle"; + +LICENSE="sickle" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND} + sys-libs/zlib" + +src_install(){ + dobin sickle + dodoc README.md +}
